| GenBank top hits | e value | %identity | Alignment |
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| KAA0052097.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-63 | 71.79 | Show/hide |
Query: GPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPHTSQQNGRTERKH
GPAPTTTVH Y YY+LFIDD+SRFTWIYFLK+RSELSRTYIEFANMIRTQFSCP+KT RTDNALEYKDS LLSFLSQQGTLVQRSCPHTSQQNGR ERKH
Subjt: GPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPHTSQQNGRTERKH
Query: RHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVVFLAMTQNIK
RHIL F + L+ I I+F F+TSL K+YMVLL TI TLK VV LF CI M+TLNLN VPAS VFLAM QNIK
Subjt: RHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVVFLAMTQNIK
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| KAA0060225.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-56 | 58.67 | Show/hide |
Query: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
+KPFDL+H DIWGPAPTTTVH Y YY+LFIDD+SRFTWIYFLK+RSELS TYIEFANMIRTQF CP+KTLRTDNALEYKDS LLSFLSQQGTLVQRSCP+
Subjt: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
Query: TSQQNGRTERKHRHILTQ---SVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASV
TSQQNGR ERKHRHIL + S S P + +G+ L ++ + + + S K Y P LK F P L
Subjt: TSQQNGRTERKHRHILTQ---SVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASV
Query: VFLAMTQNIKAFVVGIPFPKDFVYL
FL K FVVGIPFP DFVYL
Subjt: VFLAMTQNIKAFVVGIPFPKDFVYL
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| KAA0062044.1 seryl-tRNA synthetase isoform X1 [Cucumis melo var. makuwa] | 9.5e-81 | 79.33 | Show/hide |
Query: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
+KPFDL+HSDIWGPAPTTTVH Y YY+LFIDD+SRFTWIYFLK+RSELSRTYIEFANMI TQFSCP KTLRTDNALEYKD LLSFLSQQGTLVQRS PH
Subjt: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
Query: TSQQNGRTERKHRHI-LTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVVF
TSQQNGR E KH HI LTQ VPSF LPH LRNFG K LLH IPS +F LLFFRTSL K+YMVLLPT TLK VV ALF I M+TLN NHVP SVV
Subjt: TSQQNGRTERKHRHI-LTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVVF
Query: LAMTQNIK
LAM NIK
Subjt: LAMTQNIK
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| KAA0063009.1 Integrase, catalytic core [Cucumis melo var. makuwa] | 8.3e-77 | 70.93 | Show/hide |
Query: MSEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSC
+S+KPFDL+HSDIWGPAPT+ VH Y YY+LFIDD+SRFTWIYFLK+RS LSRTYIEFANMI TQFSCP+KTLRTDNALEYKDS LLSFLS + L
Subjt: MSEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSC
Query: PHTSQQNGRTERKHRHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVV
P + LTQ P F LPH LRNF K LLH I SI F FFRTSL LKNYMVLLPTI LK VV ALFFCI M+TLNLNHVPASVV
Subjt: PHTSQQNGRTERKHRHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVV
Query: FLAMTQNIKAFVVGIPFPKDFVYLDMS
FLAM QNIK FVVGIPFP DFVYL MS
Subjt: FLAMTQNIKAFVVGIPFPKDFVYLDMS
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| TYK15021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.2e-56 | 91.38 | Show/hide |
Query: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
+KPFDL+HSDIWGPAPTTTVH Y YY+LFIDD+SRFTWIYFLK+RSELSRTYIEFANMIRTQFSCP+KTLRTDNALEYKDS LLSFLSQQGTLVQRSCPH
Subjt: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
Query: TSQQNGRTERKHRHIL
TSQQNGR ERKHRHIL
Subjt: TSQQNGRTERKHRHIL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7UCC7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-64 | 71.79 | Show/hide |
Query: GPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPHTSQQNGRTERKH
GPAPTTTVH Y YY+LFIDD+SRFTWIYFLK+RSELSRTYIEFANMIRTQFSCP+KT RTDNALEYKDS LLSFLSQQGTLVQRSCPHTSQQNGR ERKH
Subjt: GPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPHTSQQNGRTERKH
Query: RHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVVFLAMTQNIK
RHIL F + L+ I I+F F+TSL K+YMVLL TI TLK VV LF CI M+TLNLN VPAS VFLAM QNIK
Subjt: RHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVVFLAMTQNIK
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| A0A5A7V2X4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-57 | 58.67 | Show/hide |
Query: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
+KPFDL+H DIWGPAPTTTVH Y YY+LFIDD+SRFTWIYFLK+RSELS TYIEFANMIRTQF CP+KTLRTDNALEYKDS LLSFLSQQGTLVQRSCP+
Subjt: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
Query: TSQQNGRTERKHRHILTQ---SVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASV
TSQQNGR ERKHRHIL + S S P + +G+ L ++ + + + S K Y P LK F P L
Subjt: TSQQNGRTERKHRHILTQ---SVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASV
Query: VFLAMTQNIKAFVVGIPFPKDFVYL
FL K FVVGIPFP DFVYL
Subjt: VFLAMTQNIKAFVVGIPFPKDFVYL
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| A0A5A7V413 Seryl-tRNA synthetase isoform X1 | 4.6e-81 | 79.33 | Show/hide |
Query: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
+KPFDL+HSDIWGPAPTTTVH Y YY+LFIDD+SRFTWIYFLK+RSELSRTYIEFANMI TQFSCP KTLRTDNALEYKD LLSFLSQQGTLVQRS PH
Subjt: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
Query: TSQQNGRTERKHRHI-LTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVVF
TSQQNGR E KH HI LTQ VPSF LPH LRNFG K LLH IPS +F LLFFRTSL K+YMVLLPT TLK VV ALF I M+TLN NHVP SVV
Subjt: TSQQNGRTERKHRHI-LTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVVF
Query: LAMTQNIK
LAM NIK
Subjt: LAMTQNIK
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| A0A5A7VBM6 Integrase, catalytic core | 4.0e-77 | 70.93 | Show/hide |
Query: MSEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSC
+S+KPFDL+HSDIWGPAPT+ VH Y YY+LFIDD+SRFTWIYFLK+RS LSRTYIEFANMI TQFSCP+KTLRTDNALEYKDS LLSFLS + L
Subjt: MSEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSC
Query: PHTSQQNGRTERKHRHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVV
P + LTQ P F LPH LRNF K LLH I SI F FFRTSL LKNYMVLLPTI LK VV ALFFCI M+TLNLNHVPASVV
Subjt: PHTSQQNGRTERKHRHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLFFRTSLLLKNYMVLLPTIQTLKFFVVPALFFCIPMSTLNLNHVPASVV
Query: FLAMTQNIKAFVVGIPFPKDFVYLDMS
FLAM QNIK FVVGIPFP DFVYL MS
Subjt: FLAMTQNIKAFVVGIPFPKDFVYLDMS
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| A0A5D3CT53 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-56 | 91.38 | Show/hide |
Query: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
+KPFDL+HSDIWGPAPTTTVH Y YY+LFIDD+SRFTWIYFLK+RSELSRTYIEFANMIRTQFSCP+KTLRTDNALEYKDS LLSFLSQQGTLVQRSCPH
Subjt: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
Query: TSQQNGRTERKHRHIL
TSQQNGR ERKHRHIL
Subjt: TSQQNGRTERKHRHIL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.7e-11 | 30.43 | Show/hide |
Query: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
++P +VHSD+ GP T+ D Y+++F+D ++ + Y +K +S++ + +F F+ V L DN EY + + F ++G + PH
Subjt: EKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPH
Query: TSQQNGRTERKHRHI
T Q NG +ER R I
Subjt: TSQQNGRTERKHRHI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-12 | 33.04 | Show/hide |
Query: DLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPHTSQQ
DLV+SD+ GP ++ Y++ FIDD SR W+Y LK + ++ + + +F ++ + +K LR+DN EY + S G +++ P T Q
Subjt: DLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCPHTSQQ
Query: NGRTERKHRHIL
NG ER +R I+
Subjt: NGRTERKHRHIL
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 1.7e-08 | 30.25 | Show/hide |
Query: SEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELS--RTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRS
S +PF +H+DI+GP Y+I F D+ +RF W+Y L +R E S + I+ QF+ V ++ D EY + L F + +G +
Subjt: SEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELS--RTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRS
Query: CPHTSQQNGRTERKHRHIL
S+ +G ER +R +L
Subjt: CPHTSQQNGRTERKHRHIL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.2e-19 | 34.87 | Show/hide |
Query: SEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCP
S +P + ++SD+W +P + +Y YY++F+D ++R+TW+Y LK +S++ T+I F N++ +F + T +DN E+ AL + SQ G S P
Subjt: SEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCP
Query: HTSQQNGRTERKHRHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLF
HT + NG +ERKHRHI+ G LL H IP +P F
Subjt: HTSQQNGRTERKHRHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.4e-20 | 34.87 | Show/hide |
Query: SEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCP
S KP + ++SD+W +P ++ +Y YY++F+D ++R+TW+Y LK +S++ T+I F +++ +F + TL +DN E+ L +LSQ G S P
Subjt: SEKPFDLVHSDIWGPAPTTTVHDYCYYILFIDDYSRFTWIYFLKNRSELSRTYIEFANMIRTQFSCPVKTLRTDNALEYKDSALLSFLSQQGTLVQRSCP
Query: HTSQQNGRTERKHRHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLF
HT + NG +ERKHRHI+ G LL H +P +P F
Subjt: HTSQQNGRTERKHRHILTQSVPSFSLPHVLRNFGDKLLLHLFIPSIIFPLLF
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