; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G18700 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G18700
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAlba domain-containing protein
Genome locationChr1:14120894..14123192
RNA-Seq ExpressionCSPI01G18700
SyntenyCSPI01G18700
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150019.1 uncharacterized protein At2g34160 [Cucumis sativus]4.1e-60100Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

XP_022924689.1 uncharacterized protein At2g34160-like [Cucurbita moschata]1.0e-5898.46Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEEREN DGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

XP_022961070.1 uncharacterized protein At2g34160-like [Cucurbita moschata]1.5e-5999.23Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

XP_022972044.1 uncharacterized protein At2g34160-like [Cucurbita maxima]1.0e-5898.46Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEEREN DGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

XP_022987902.1 uncharacterized protein At2g34160-like [Cucurbita maxima]5.9e-5998.46Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAA EERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

TrEMBL top hitse value%identityAlignment
A0A0A0LZB6 Alba domain-containing protein2.0e-60100Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

A0A1S3B8Y2 uncharacterized protein At2g34160-like2.0e-60100Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

A0A5A7TV88 Alba domain-containing protein2.0e-60100Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

A0A6J1CUJ0 uncharacterized protein At2g34160-like2.0e-60100Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

A0A6J1HAY2 uncharacterized protein At2g34160-like7.5e-6099.23Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EIVLGKTENFDELMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341601.0e-5081.54Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEIT+GVN++ L  DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIATVVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EI L K+E FDELMAAA EE+E+ + + Q+
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein8.7e-5383.08Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEITEGVN++ L  D+QKKNRIQVSNTKKPLFFYVNLAKRYMQQY +VELSALGMAIATVVTVAEILKNNG A+EKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EI L K+E FDELMAAA EE+E  + +EQ+
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

AT2G34160.1 Alba DNA/RNA-binding protein7.4e-5281.54Show/hide
Query:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEIT+GVN++ L  DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIATVVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKI
Subjt:  MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERENEDGEEQS
        EI L K+E FDELMAAA EE+E+ + + Q+
Subjt:  EIVLGKTENFDELMAAAAEERENEDGEEQS

AT3G04620.1 Alba DNA/RNA-binding protein4.7e-3864.75Show/hide
Query:  ITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIV
        +     + T T ++ KKNRIQVSNTKKPLFFYVNLAKRY+QQ+NEVELSALGMAI TVVT++EILKNNGLA EKK++TSTV +KD+++G+ VQKAKIEIV
Subjt:  ITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIV

Query:  LGKTENFDELMAAAAEERENED
        LGK++ FD L+      +  E+
Subjt:  LGKTENFDELMAAAAEERENED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGATAACCGAGGGTGTCAACTCTATCACATTGACAGCTGATTCCCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAACCCTTATTCTTCTATGTTAA
TCTCGCCAAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGAATGGCCATTGCAACTGTTGTTACGGTTGCGGAAATTCTGAAAAACAACGGATTGG
CTTTAGAAAAGAAGATTATGACTTCTACTGTTGATATCAAGGATGATTCTCGGGGGAGACCAGTTCAAAAGGCTAAGATTGAGATTGTGCTGGGAAAAACTGAAAACTTT
GATGAACTGATGGCTGCTGCTGCAGAGGAAAGGGAAAACGAAGATGGTGAAGAGCAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
CCCAGAAAGTAAATGTGTGTATATATATAATTTATGTAATATATATATTCCGCTAACAATTAAAAAGAAAAGGAAAAAAATAAGGCATCGATGCCGTCCGTACACAAATA
GCCTAGCTTTACCGAAATTGAAGCCTTTTCTTCACTTTGCACTTCCCATTCTCAAAGTCGCACTTCCAGAGCGTGAGTTTTAGGGTTAGGGTTTTAGGTTTCACTAAAAG
CTCAATGGAGGAGATAACCGAGGGTGTCAACTCTATCACATTGACAGCTGATTCCCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAACCCTTATTCTTCTATG
TTAATCTCGCCAAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGAATGGCCATTGCAACTGTTGTTACGGTTGCGGAAATTCTGAAAAACAACGGA
TTGGCTTTAGAAAAGAAGATTATGACTTCTACTGTTGATATCAAGGATGATTCTCGGGGGAGACCAGTTCAAAAGGCTAAGATTGAGATTGTGCTGGGAAAAACTGAAAA
CTTTGATGAACTGATGGCTGCTGCTGCAGAGGAAAGGGAAAACGAAGATGGTGAAGAGCAGAGTTGAAAAGCTTTTTTTTTTTCTCTTTTCTTTTCTGTTCTTATCCTGC
TTGTGGATGAGGCTAGTTCTTTCCTTTATATCTGATATCTCTGTTCTTAATTACGTTAGTAAACAAGTGGTTCATTTACTGATGTAGGCTTTTTAGTTGTGGGGAACCGT
TGACTTTTTTACCATGGGACATCTTTATTTAAGAGAGTGGAAACATAATCTGAGTTACCCTTCAAAATTAAGTTGATAGTCTTTATTTTCATGCTTCAATCTTTGGTAAA
TATGCATTTGTGATGGGTCATCTGCTTCTGCTATTAAAACTACATAGAAGTATGGTCTCTTTAAACGTATTATCATTGAGCTTAGTTCCCCAAAACCTGTTAACCACTTA
GGACCAACCGCATATGTTCATATCATGAGTCTTATTTAGACATGTAAGATCTAAAGAGAGT
Protein sequenceShow/hide protein sequence
MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENF
DELMAAAAEERENEDGEEQS