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CSPI01G18800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G18800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGag-pro-like protein
Genome locationChr1:14238562..14239014
RNA-Seq ExpressionCSPI01G18800
SyntenyCSPI01G18800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.8e-4362.82Show/hide
Query:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP
        MD+Q NDQVQAV Q+VE LKDQ+AKILELLT  RGK +AG S  VE+ LNQ+ +D PA+P GFT Q      M    YP SFPAP  N T+QQAA   +P
Subjt:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP

Query:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP
        + TP+MEG +K+ E+QGS+RRLEFLEERLR IEGAD+Y  +DA +LCLI+DVVIPP
Subjt:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP

KAA0054929.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.5e-4275.57Show/hide
Query:  MAKILELLTAERGKGIAGISLYVEISLNQIDDTPAFPSGFTLQMMAS-----APYPPSFPAPESNQTSQQAAQTRDPVFTPVMEGGRKVLEDQGSKRRLE
        M KILELLT  +GKGIAG S ++EI LNQ DDTPAFP  FT QMM+S       YP SFP PESNQTSQQAAQT DPV TPV+E GRK+ EDQGSKRRLE
Subjt:  MAKILELLTAERGKGIAGISLYVEISLNQIDDTPAFPSGFTLQMMAS-----APYPPSFPAPESNQTSQQAAQTRDPVFTPVMEGGRKVLEDQGSKRRLE

Query:  FLEERLRAIEGADVYRDVDAARLCLIADVVI
        FLEERLRAIEGADVY DV+A+RLCLIADVVI
Subjt:  FLEERLRAIEGADVYRDVDAARLCLIADVVI

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]4.4e-4261.54Show/hide
Query:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP
        MD+Q NDQVQAV Q+VE LKDQ+AKILELLT  RGK +AG S  VE+ LNQ+ +D PA+P GFT Q      M    YP SFP P  N T+QQ A   +P
Subjt:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP

Query:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP
        + T +MEGG+K+ E+QGS+RRLEFLEERLR IEGAD+Y  +DA +LCLI+DVVIPP
Subjt:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]4.4e-4261.54Show/hide
Query:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP
        MD+Q NDQVQAV Q+VE LKDQ+AKILELLT  RGK + G S  VE+ LNQ+ +D P +P GFT Q      M    YP SFPAP  N T+QQAA   +P
Subjt:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP

Query:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP
        + T +MEGG+K+ E+QGS+RRLEFLEERLR IEGAD+Y  +DA +LCLI+DVVIPP
Subjt:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP

XP_016902756.1 PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo]3.0e-3860Show/hide
Query:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQMMASAPYPPSFPAPESNQTSQQAAQTRDPVFTPV
        MD+Q NDQVQAV Q+VE LKDQ+AKILELLT  RGK +AGIS  VE+ LNQ+ +D PA+P GFT Q  +S     ++P    N  +QQA    DP+ TP+
Subjt:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQMMASAPYPPSFPAPESNQTSQQAAQTRDPVFTPV

Query:  MEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIP
         E G+K+ E+QGS++RLEFLEERLRAI+GAD+Y  +DAA+LCLI+DVVIP
Subjt:  MEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIP

TrEMBL top hitse value%identityAlignment
A0A5A7SM69 Gag-pro-like protein1.4e-3860Show/hide
Query:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQMMASAPYPPSFPAPESNQTSQQAAQTRDPVFTPV
        MD+Q NDQVQAV Q+VE LKDQ+AKILELLT  RGK +AGIS  VE+ LNQ+ +D PA+P GFT Q  +S     ++P    N  +QQA    DP+ TP+
Subjt:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQMMASAPYPPSFPAPESNQTSQQAAQTRDPVFTPV

Query:  MEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIP
         E G+K+ E+QGS++RLEFLEERLRAI+GAD+Y  +DAA+LCLI+DVVIP
Subjt:  MEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIP

A0A5A7TXF2 Gag-pro-like protein8.6e-4462.82Show/hide
Query:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP
        MD+Q NDQVQAV Q+VE LKDQ+AKILELLT  RGK +AG S  VE+ LNQ+ +D PA+P GFT Q      M    YP SFPAP  N T+QQAA   +P
Subjt:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP

Query:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP
        + TP+MEG +K+ E+QGS+RRLEFLEERLR IEGAD+Y  +DA +LCLI+DVVIPP
Subjt:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP

A0A5A7UN81 Gag-pro-like protein7.3e-4375.57Show/hide
Query:  MAKILELLTAERGKGIAGISLYVEISLNQIDDTPAFPSGFTLQMMAS-----APYPPSFPAPESNQTSQQAAQTRDPVFTPVMEGGRKVLEDQGSKRRLE
        M KILELLT  +GKGIAG S ++EI LNQ DDTPAFP  FT QMM+S       YP SFP PESNQTSQQAAQT DPV TPV+E GRK+ EDQGSKRRLE
Subjt:  MAKILELLTAERGKGIAGISLYVEISLNQIDDTPAFPSGFTLQMMAS-----APYPPSFPAPESNQTSQQAAQTRDPVFTPVMEGGRKVLEDQGSKRRLE

Query:  FLEERLRAIEGADVYRDVDAARLCLIADVVI
        FLEERLRAIEGADVY DV+A+RLCLIADVVI
Subjt:  FLEERLRAIEGADVYRDVDAARLCLIADVVI

A0A5A7V681 Retrotrans_gag domain-containing protein2.1e-4261.54Show/hide
Query:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP
        MD+Q NDQVQAV Q+VE LKDQ+AKILELLT  RGK +AG S  VE+ LNQ+ +D PA+P GFT Q      M    YP SFP P  N T+QQ A   +P
Subjt:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP

Query:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP
        + T +MEGG+K+ E+QGS+RRLEFLEERLR IEGAD+Y  +DA +LCLI+DVVIPP
Subjt:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP

A0A5A7VAU5 Uncharacterized protein2.1e-4261.54Show/hide
Query:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP
        MD+Q NDQVQAV Q+VE LKDQ+AKILELLT  RGK + G S  VE+ LNQ+ +D P +P GFT Q      M    YP SFPAP  N T+QQAA   +P
Subjt:  MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQI-DDTPAFPSGFTLQ-----MMASAPYPPSFPAPESNQTSQQAAQTRDP

Query:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP
        + T +MEGG+K+ E+QGS+RRLEFLEERLR IEGAD+Y  +DA +LCLI+DVVIPP
Subjt:  VFTPVMEGGRKVLEDQGSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCAAGTTAATGATCAAGTTCAGGCAGTATGTCAAAACGTGGAGGAATTGAAAGATCAGATGGCAAAAATTCTAGAATTACTCACTGCCGAGAGGGGGAAGGG
CATTGCCGGGATATCTTTATATGTGGAGATCAGTTTGAATCAAATAGATGACACACCTGCATTCCCTTCTGGGTTTACTCTACAAATGATGGCAAGTGCACCGTATCCTC
CATCATTTCCTGCACCAGAGTCAAATCAGACCTCGCAACAAGCAGCTCAAACAAGGGATCCAGTATTCACCCCTGTCATGGAGGGTGGTAGGAAGGTTTTAGAGGATCAA
GGTAGCAAAAGAAGACTAGAGTTCTTAGAGGAAAGGTTACGAGCTATTGAGGGTGCAGATGTTTACAGGGATGTTGATGCGGCGCGATTATGTCTCATCGCGGACGTAGT
AATCCCTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCAAGTTAATGATCAAGTTCAGGCAGTATGTCAAAACGTGGAGGAATTGAAAGATCAGATGGCAAAAATTCTAGAATTACTCACTGCCGAGAGGGGGAAGGG
CATTGCCGGGATATCTTTATATGTGGAGATCAGTTTGAATCAAATAGATGACACACCTGCATTCCCTTCTGGGTTTACTCTACAAATGATGGCAAGTGCACCGTATCCTC
CATCATTTCCTGCACCAGAGTCAAATCAGACCTCGCAACAAGCAGCTCAAACAAGGGATCCAGTATTCACCCCTGTCATGGAGGGTGGTAGGAAGGTTTTAGAGGATCAA
GGTAGCAAAAGAAGACTAGAGTTCTTAGAGGAAAGGTTACGAGCTATTGAGGGTGCAGATGTTTACAGGGATGTTGATGCGGCGCGATTATGTCTCATCGCGGACGTAGT
AATCCCTCCATAG
Protein sequenceShow/hide protein sequence
MDDQVNDQVQAVCQNVEELKDQMAKILELLTAERGKGIAGISLYVEISLNQIDDTPAFPSGFTLQMMASAPYPPSFPAPESNQTSQQAAQTRDPVFTPVMEGGRKVLEDQ
GSKRRLEFLEERLRAIEGADVYRDVDAARLCLIADVVIPP