; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G18900 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G18900
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr1:14332701..14334074
RNA-Seq ExpressionCSPI01G18900
SyntenyCSPI01G18900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026169.1 uncharacterized protein E6C27_scaffold19G001250 [Cucumis melo var. makuwa]2.9e-10952.05Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        M LRPEDLVILEP N  DSDIDVE+DELFGNEEN+EEENE IPS+IFTQIDWDI NSVCEQGSTLANR+  VD  CLI KGM+FDCKEDL LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------
             V+                                                        LDSNFMS++IQN+V+AD ++T+S              
Subjt:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------

Query:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------
                             KSYNELLYWLS VVHYNPGT+VDWFFLPSDVP                                               
Subjt:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------

Query:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR
                     VEGEN SSWSWFL+AL +YVTDR  ICLISDR+RGILSAINNE++GWSEPRA HRYCLRHVASNFN KYKSKQLKD VFRAGNQHQR
Subjt:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR

Query:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSR
        RKFI+ MKE+++LNPECLEFFEDID++KWTQSHDNG++
Subjt:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSR

KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]2.9e-12555.58Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        MSLRPEDLVILEP N GDSDIDVE+DELFGNEEN+EEENE IPS+IFTQIDWDI NSVCEQGSTL NR+  VD SCLI KGM+FDCKEDL LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------
             V+                                                        LDSNFMS+QIQN+V+ADP++TVS              
Subjt:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------

Query:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------
                             KSYNEL YWLS VVHYNPGTRVDWFFLPSDVP                                               
Subjt:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------

Query:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR
                     VEGEN SSWSWFL+AL +YVTDR GICLISDR+RGILSAINNEE+GWSEPRA HRYCLRHVASNFN KYKSKQLKDLVFRAGNQHQR
Subjt:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR

Query:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA
        RKFI+ MKE+++LNPECLEFFEDID++KWTQSHDNG RY W TSNAAECMNGVFKGA
Subjt:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA

KAA0054037.1 uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa]6.8e-11457.93Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        MSLRPEDL+ILEP N GDSDIDVEVDELFGNEEN+EEENE IPS+IFTQIDWDI NSVCEQGSTLANR+ SVD SCLI KGM+FDCKEDL LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVLQSLDSNFMSVQI-----------------------------QNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDV--------
             V+   + N  SV+                              ++  KADP++TVS         L  ++    GTRVDWFFLPSDV        
Subjt:  ATGGYVLQSLDSNFMSVQI-----------------------------QNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDV--------

Query:  ----------------------------------------------------PVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGW
                                                             VEGEN SSWSWFL+AL +YVTD+ GICLISDR+RGILSAINNEE+GW
Subjt:  ----------------------------------------------------PVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGW

Query:  SEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA
        SEPRA HRYCLRHVASNFN KYKSKQLKDLVFRAGNQHQRRKFI+ MKE+++LNPECLEFFEDID++KWTQSHDNG RY W TSNA ECMNGVFKGA
Subjt:  SEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA

TYK02543.1 uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]6.5e-12555.36Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        MSLRPEDLVILEP N GDSDIDVE+DELFGNEEN+EEENE IPS+IFTQIDWDI NSVCEQGSTL NR+  VD SCLI KGM+FDCKEDL LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------
             V+                                                        LDSNFMS++IQN+V+ADP++TVS              
Subjt:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------

Query:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------
                             KSYNEL YWLS VVHYNPGTRVDWFFLPSDVP                                               
Subjt:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------

Query:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR
                     VEGEN SSWSWFL+AL +YVTDR GICLISDR+RGILSAINNEE+GWSEPRA HRYCLRHVASNFN KYKSKQLKDLVFRAGNQHQR
Subjt:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR

Query:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA
        RKFI+ MKE+++LNPECLEFFEDID++KWTQSHDNG RY W TSNAAECMNGVFKGA
Subjt:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA

XP_031737534.1 uncharacterized protein LOC116402427 [Cucumis sativus]2.9e-10953.17Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        MSLRPEDLVILEP NDGDSDIDVEVDELF                                     +RNVSVD SCLI KGMIFD KEDL+LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------
             V+                                                        LDSNFMSVQIQNMVKADPTITVS              
Subjt:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------

Query:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------
                             KSYNEL YWLS VVHYNPGTRVDWFFLPSDVP                                               
Subjt:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------

Query:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR
                     VEGENTSSWSWFL AL EYVTDRYGICLISDR+R ILSAINNEEVGWSEPRA+HRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR
Subjt:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR

Query:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA
        RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRY W TSNAAECMNGVFKGA
Subjt:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA

TrEMBL top hitse value%identityAlignment
A0A1S3BS22 uncharacterized protein LOC1034928812.9e-7842.7Show/hide
Query:  EDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMAATGGY
        EDLVILEP N G+SDIDVEVDELF                                GSTLANR+  VD SCLI KGM+FDCKEDL LAVK   +      
Subjt:  EDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMAATGGY

Query:  VL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS-------------------
        V+                                                        LDSNFMS++IQN+V+ADP++TVS                   
Subjt:  VL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS-------------------

Query:  ----------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP----------------------------------------------------
                        KSYN+L YWLS VVHYNPGTRVDWF LPSDVP                                                    
Subjt:  ----------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP----------------------------------------------------

Query:  --------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIK
                VEGEN SSWSWFL+AL +YVTDR GICLISDR+RGILS INNEE+GWSEPRA HRYCLRHVA+NFN KYKSKQLKDLVFRA           
Subjt:  --------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIK

Query:  IMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA
                         DID++KWTQSHDNG RY W TS AAECMNGVFKGA
Subjt:  IMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA

A0A5A7SLM1 Uncharacterized protein1.4e-10952.05Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        M LRPEDLVILEP N  DSDIDVE+DELFGNEEN+EEENE IPS+IFTQIDWDI NSVCEQGSTLANR+  VD  CLI KGM+FDCKEDL LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------
             V+                                                        LDSNFMS++IQN+V+AD ++T+S              
Subjt:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------

Query:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------
                             KSYNELLYWLS VVHYNPGT+VDWFFLPSDVP                                               
Subjt:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------

Query:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR
                     VEGEN SSWSWFL+AL +YVTDR  ICLISDR+RGILSAINNE++GWSEPRA HRYCLRHVASNFN KYKSKQLKD VFRAGNQHQR
Subjt:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR

Query:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSR
        RKFI+ MKE+++LNPECLEFFEDID++KWTQSHDNG++
Subjt:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSR

A0A5A7TN56 SWIM-type domain-containing protein1.4e-12555.58Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        MSLRPEDLVILEP N GDSDIDVE+DELFGNEEN+EEENE IPS+IFTQIDWDI NSVCEQGSTL NR+  VD SCLI KGM+FDCKEDL LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------
             V+                                                        LDSNFMS+QIQN+V+ADP++TVS              
Subjt:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------

Query:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------
                             KSYNEL YWLS VVHYNPGTRVDWFFLPSDVP                                               
Subjt:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------

Query:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR
                     VEGEN SSWSWFL+AL +YVTDR GICLISDR+RGILSAINNEE+GWSEPRA HRYCLRHVASNFN KYKSKQLKDLVFRAGNQHQR
Subjt:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR

Query:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA
        RKFI+ MKE+++LNPECLEFFEDID++KWTQSHDNG RY W TSNAAECMNGVFKGA
Subjt:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA

A0A5A7UHL3 SWIM-type domain-containing protein3.3e-11457.93Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        MSLRPEDL+ILEP N GDSDIDVEVDELFGNEEN+EEENE IPS+IFTQIDWDI NSVCEQGSTLANR+ SVD SCLI KGM+FDCKEDL LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVLQSLDSNFMSVQI-----------------------------QNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDV--------
             V+   + N  SV+                              ++  KADP++TVS         L  ++    GTRVDWFFLPSDV        
Subjt:  ATGGYVLQSLDSNFMSVQI-----------------------------QNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDV--------

Query:  ----------------------------------------------------PVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGW
                                                             VEGEN SSWSWFL+AL +YVTD+ GICLISDR+RGILSAINNEE+GW
Subjt:  ----------------------------------------------------PVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGW

Query:  SEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA
        SEPRA HRYCLRHVASNFN KYKSKQLKDLVFRAGNQHQRRKFI+ MKE+++LNPECLEFFEDID++KWTQSHDNG RY W TSNA ECMNGVFKGA
Subjt:  SEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA

A0A5D3BS92 SWIM-type domain-containing protein3.2e-12555.36Show/hide
Query:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA
        MSLRPEDLVILEP N GDSDIDVE+DELFGNEEN+EEENE IPS+IFTQIDWDI NSVCEQGSTL NR+  VD SCLI KGM+FDCKEDL LAVK   + 
Subjt:  MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMA

Query:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------
             V+                                                        LDSNFMS++IQN+V+ADP++TVS              
Subjt:  ATGGYVL------------------------------------------------------QSLDSNFMSVQIQNMVKADPTITVS--------------

Query:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------
                             KSYNEL YWLS VVHYNPGTRVDWFFLPSDVP                                               
Subjt:  ---------------------KSYNELLYWLSVVVHYNPGTRVDWFFLPSDVP-----------------------------------------------

Query:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR
                     VEGEN SSWSWFL+AL +YVTDR GICLISDR+RGILSAINNEE+GWSEPRA HRYCLRHVASNFN KYKSKQLKDLVFRAGNQHQR
Subjt:  -------------VEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQR

Query:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA
        RKFI+ MKE+++LNPECLEFFEDID++KWTQSHDNG RY W TSNAAECMNGVFKGA
Subjt:  RKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase4.3e-1837.9Show/hide
Query:  NTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYK--SKQLKDLVFRAGNQHQRRKFIKIMKELQRLNP
        +  SW WFL  + E VT R GICLIS     IL+ IN     W EP A HR+CL H+ S            +  LV  AG+  Q+ +F   MKE++  NP
Subjt:  NTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRYCLRHVASNFNQKYK--SKQLKDLVFRAGNQHQRRKFIKIMKELQRLNP

Query:  ECLEFFEDIDVEKWTQSHDNGSRY
        E  ++ +     +W  +HD+G RY
Subjt:  ECLEFFEDIDVEKWTQSHDNGSRY

AT1G64255.1 MuDR family transposase1.6e-2031.4Show/hide
Query:  IQNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDVPVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIH
        I+      P I V        Y L +++         +F L   V  E  +T  W WFL  + E VT R G+CLIS  +  I++ +N     W EP A H
Subjt:  IQNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDVPVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIH

Query:  RYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRY
        R+ L H  S F++ + S  L   + RAG+  Q+ +F+  M +++  NPE  ++ +     +W  +HDNG RY
Subjt:  RYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRY

AT1G64260.1 MuDR family transposase7.1e-2132Show/hide
Query:  SVQIQNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDVPVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPR
        S  I+      P I V        Y L +++         +F L   V  E  +T SW WF   + E VT R  +CLIS   R I++ +N     W EP 
Subjt:  SVQIQNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDVPVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPR

Query:  AIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRY
        A H++CL H+ S F   ++   L+ LV +AG+ +Q+ +F   M +++  NPE  ++ + I   KW  +HD+G RY
Subjt:  AIHRYCLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTGCGACCTGAAGATTTAGTTATTCTTGAACCTGATAATGATGGAGATAGTGATATAGATGTAGAAGTCGATGAACTATTTGGTAATGAAGAAAATATAGAGGA
AGAGAATGAAATGATCCCGTCCGATATATTTACACAAATAGATTGGGACATTGCGAATTCTGTTTGTGAACAAGGCTCTACATTGGCAAATAGAAACGTATCTGTTGACA
TATCTTGTTTAATACATAAGGGAATGATCTTTGACTGTAAGGAAGATCTTCTGTTGGCTGTTAAAAGTGGAGTAATGGCTGCAACTGGAGGTTACGTGCTACAAAGCCTA
GATTCAAATTTCATGAGTGTTCAAATTCAAAATATGGTGAAAGCTGATCCTACTATTACTGTGTCTAAATCATATAATGAGCTTCTATACTGGTTGAGTGTCGTTGTACA
TTATAATCCGGGAACTCGAGTTGATTGGTTTTTTCTTCCATCCGATGTACCAGTGGAAGGGGAAAACACGTCTAGTTGGTCATGGTTTCTTCATGCGCTTTGCGAATACG
TTACTGATCGATATGGTATTTGCTTGATCTCTGACAGATATAGGGGCATTCTTTCTGCCATTAACAATGAAGAGGTAGGTTGGAGCGAACCTCGAGCTATCCATCGATAT
TGTCTTCGTCATGTTGCTAGCAACTTCAATCAGAAATATAAATCGAAGCAACTAAAAGATTTGGTGTTTAGGGCAGGTAATCAACACCAAAGGCGCAAATTTATAAAAAT
AATGAAAGAACTACAACGATTGAACCCAGAGTGTCTTGAGTTTTTTGAAGATATTGACGTGGAAAAATGGACTCAGTCCCATGACAATGGGTCTCGATATGAGTGGAAGA
CAAGCAATGCAGCTGAATGTATGAACGGTGTATTTAAAGGAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTTGCGACCTGAAGATTTAGTTATTCTTGAACCTGATAATGATGGAGATAGTGATATAGATGTAGAAGTCGATGAACTATTTGGTAATGAAGAAAATATAGAGGA
AGAGAATGAAATGATCCCGTCCGATATATTTACACAAATAGATTGGGACATTGCGAATTCTGTTTGTGAACAAGGCTCTACATTGGCAAATAGAAACGTATCTGTTGACA
TATCTTGTTTAATACATAAGGGAATGATCTTTGACTGTAAGGAAGATCTTCTGTTGGCTGTTAAAAGTGGAGTAATGGCTGCAACTGGAGGTTACGTGCTACAAAGCCTA
GATTCAAATTTCATGAGTGTTCAAATTCAAAATATGGTGAAAGCTGATCCTACTATTACTGTGTCTAAATCATATAATGAGCTTCTATACTGGTTGAGTGTCGTTGTACA
TTATAATCCGGGAACTCGAGTTGATTGGTTTTTTCTTCCATCCGATGTACCAGTGGAAGGGGAAAACACGTCTAGTTGGTCATGGTTTCTTCATGCGCTTTGCGAATACG
TTACTGATCGATATGGTATTTGCTTGATCTCTGACAGATATAGGGGCATTCTTTCTGCCATTAACAATGAAGAGGTAGGTTGGAGCGAACCTCGAGCTATCCATCGATAT
TGTCTTCGTCATGTTGCTAGCAACTTCAATCAGAAATATAAATCGAAGCAACTAAAAGATTTGGTGTTTAGGGCAGGTAATCAACACCAAAGGCGCAAATTTATAAAAAT
AATGAAAGAACTACAACGATTGAACCCAGAGTGTCTTGAGTTTTTTGAAGATATTGACGTGGAAAAATGGACTCAGTCCCATGACAATGGGTCTCGATATGAGTGGAAGA
CAAGCAATGCAGCTGAATGTATGAACGGTGTATTTAAAGGAGCTTGA
Protein sequenceShow/hide protein sequence
MSLRPEDLVILEPDNDGDSDIDVEVDELFGNEENIEEENEMIPSDIFTQIDWDIANSVCEQGSTLANRNVSVDISCLIHKGMIFDCKEDLLLAVKSGVMAATGGYVLQSL
DSNFMSVQIQNMVKADPTITVSKSYNELLYWLSVVVHYNPGTRVDWFFLPSDVPVEGENTSSWSWFLHALCEYVTDRYGICLISDRYRGILSAINNEEVGWSEPRAIHRY
CLRHVASNFNQKYKSKQLKDLVFRAGNQHQRRKFIKIMKELQRLNPECLEFFEDIDVEKWTQSHDNGSRYEWKTSNAAECMNGVFKGA