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CSPI01G19170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G19170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationChr1:14585993..14586148
RNA-Seq ExpressionCSPI01G19170
SyntenyCSPI01G19170
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR024097 - Basic helix-loop-helix leucine zipper transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653117.1 hypothetical protein Csa_019752 [Cucumis sativus]2.2e-17100Show/hide
Query:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
Subjt:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
TYK20117.1 transcription factor bHLH74-like [Cucumis melo var. makuwa]1.7e-1492.16Show/hide
Query:  EQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        EQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AER
Subjt:  EQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
XP_004141299.3 transcription factor bHLH74 [Cucumis sativus]1.7e-1490.38Show/hide
Query:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        MEQ LGGNSRGKST KQTKEKS+NSAEAPKE+YIHVRARRGQATNSHS+AER
Subjt:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
XP_008452681.1 PREDICTED: transcription factor bHLH74-like [Cucumis melo]4.6e-1592.31Show/hide
Query:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        MEQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AER
Subjt:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
XP_038896915.1 transcription factor bHLH74 [Benincasa hispida]1.0e-1490.38Show/hide
Query:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        MEQ LGGNSRGK+T KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AER
Subjt:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
TrEMBL top hitse value%identityAlignment
A0A0A0L0K5 BHLH domain-containing protein1.4e-1488.46Show/hide
Query:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        MEQ +GGNSRGKST KQTKEKS+NSAEAPKE+YIHVRARRGQATNSHS+AER
Subjt:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
A0A0A0LTU3 BHLH domain-containing protein1.1e-17100Show/hide
Query:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
Subjt:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
A0A1S3BV77 transcription factor bHLH74-like2.2e-1592.31Show/hide
Query:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        MEQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AER
Subjt:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
A0A5A7VFJ6 Transcription factor bHLH74-like2.2e-1592.31Show/hide
Query:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        MEQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AER
Subjt:  MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
A0A5D3D971 Transcription factor bHLH74-like8.5e-1592.16Show/hide
Query:  EQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        EQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AER
Subjt:  EQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
SwissProt top hitse value%identityAlignment
Q69WS3 Transcription factor BHLH0944.9e-0454.35Show/hide
Query:  GNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        G   G S++    +K+    E PK+ YIHVRARRGQAT+SHS+AER
Subjt:  GNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
Q6NKN9 Transcription factor bHLH744.0e-0662.5Show/hide
Query:  SRGKSTRKQTKE----KSNNSAEAPKESYIHVRARRGQATNSHSVAER
        S+ K    Q+KE    +S+ S EAPKE+YIH+RARRGQATNSHS+AER
Subjt:  SRGKSTRKQTKE----KSNNSAEAPKESYIHVRARRGQATNSHSVAER
Q84T08 Transcription factor BHLH0892.9e-0480.77Show/hide
Query:  EAPKESYIHVRARRGQATNSHSVAER
        E PK+ YIHVRARRGQAT+SHS+AER
Subjt:  EAPKESYIHVRARRGQATNSHSVAER
Q93W88 Transcription factor bHLH1376.5e-0453.33Show/hide
Query:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        NS+     +++K++   S E P   YIHVRARRGQAT+SHS+AER
Subjt:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
Q9CAA9 Transcription factor bHLH492.0e-0560Show/hide
Query:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        NS GK +    K++   S++ PK+ YIHVRARRGQATNSHS+AER
Subjt:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
Arabidopsis top hitse value%identityAlignment
AT1G10120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.9e-0762.5Show/hide
Query:  SRGKSTRKQTKE----KSNNSAEAPKESYIHVRARRGQATNSHSVAER
        S+ K    Q+KE    +S+ S EAPKE+YIH+RARRGQATNSHS+AER
Subjt:  SRGKSTRKQTKE----KSNNSAEAPKESYIHVRARRGQATNSHSVAER
AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-0660Show/hide
Query:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        NS GK +    K++   S++ PK+ YIHVRARRGQATNSHS+AER
Subjt:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
AT1G68920.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-0660Show/hide
Query:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        NS GK +    K++   S++ PK+ YIHVRARRGQATNSHS+AER
Subjt:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
AT1G68920.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-0660Show/hide
Query:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        NS GK +    K++   S++ PK+ YIHVRARRGQATNSHS+AER
Subjt:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.6e-0553.33Show/hide
Query:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        NS+     +++K++   S E P   YIHVRARRGQAT+SHS+AER
Subjt:  NSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAATTTTAGGTGGGAATTCACGTGGAAAATCAACTAGAAAACAAACTAAAGAGAAATCTAATAATAGTGCTGAGGCTCCTAAGGAAAGTTATATTCATGTGAG
AGCTAGAAGAGGGCAAGCCACAAATAGCCATAGCGTCGCTGAGAGG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAATTTTAGGTGGGAATTCACGTGGAAAATCAACTAGAAAACAAACTAAAGAGAAATCTAATAATAGTGCTGAGGCTCCTAAGGAAAGTTATATTCATGTGAG
AGCTAGAAGAGGGCAAGCCACAAATAGCCATAGCGTCGCTGAGAGG
Protein sequenceShow/hide protein sequence
MEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER