; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G19280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G19280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionserine-rich protein-related
Genome locationChr1:14749173..14749830
RNA-Seq ExpressionCSPI01G19280
SyntenyCSPI01G19280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046595.1 hypothetical protein E6C27_scaffold114G001360 [Cucumis melo var. makuwa]2.8e-3391.95Show/hide
Query:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
        MGSQ KMSI IPSTAKSAG+GDGV G  HSCSSK QCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
Subjt:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA

KAB1200592.1 hypothetical protein CJ030_MR0G006893 [Morella rubra]2.2e-0960Show/hide
Query:  STAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
        ST   +G+G+ V G S   S KGQCLCSPTTH GSFRCRLHRS+S  W ++SKS  AS   S+ + LSPKSVES+
Subjt:  STAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA

KAE8653119.1 hypothetical protein Csa_020123 [Cucumis sativus]9.4e-37100Show/hide
Query:  AKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
        AKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
Subjt:  AKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA

KAF5945763.1 hypothetical protein HYC85_015991 [Camellia sinensis]2.2e-0950Show/hide
Query:  AKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES
        +K  I + +T+  +G GD         S KGQCLCSPTTH GSFRCR HRS S PW ++S S    +  +N S +SPKSVES
Subjt:  AKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES

KAG6589904.1 hypothetical protein SDJN03_15327, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2575.86Show/hide
Query:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTA-ASADASNTSDLSPKSVES
        M +  K+ I IPS+AKS G+GDGV   +H+CSSKGQCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTA-ASADASNTSDLSPKSVES

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ0 Uncharacterized protein2.9e-39100Show/hide
Query:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
        MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
Subjt:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA

A0A5D3BJV5 Uncharacterized protein1.4e-3391.95Show/hide
Query:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
        MGSQ KMSI IPSTAKSAG+GDGV G  HSCSSK QCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
Subjt:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA

A0A5N6QHE2 Uncharacterized protein1.2e-0848.84Show/hide
Query:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES
        M S   +++   ST+  +G+ + V G   S S KGQCLCSPTTH GSFRCR HRS+S  W ++SKS  A    S+ + +SPKS+ES
Subjt:  MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES

A0A6A1UK22 Uncharacterized protein1.1e-0960Show/hide
Query:  STAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA
        ST   +G+G+ V G S   S KGQCLCSPTTH GSFRCRLHRS+S  W ++SKS  AS   S+ + LSPKSVES+
Subjt:  STAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA

A0A7J7GYA4 Uncharacterized protein1.1e-0950Show/hide
Query:  AKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES
        +K  I + +T+  +G GD         S KGQCLCSPTTH GSFRCR HRS S PW ++S S    +  +N S +SPKSVES
Subjt:  AKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein4.6e-0554.55Show/hide
Query:  AKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSL
        A  A  G G L    S  +K  C+CSPTTHPGSF+C+LHR+ SL
Subjt:  AKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSL

AT1G67910.1 unknown protein1.1e-0645.68Show/hide
Query:  MSIRIPSTAKSAGEGDGVLGHSHSCS-SKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES
        M + I S   SA E  G  G S   S +K  CLCSPTTHPGSFRCR+HRS SL  ++       S +A++  D  PK  +S
Subjt:  MSIRIPSTAKSAGEGDGVLGHSHSCS-SKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES

AT1G67910.2 unknown protein1.1e-0645.68Show/hide
Query:  MSIRIPSTAKSAGEGDGVLGHSHSCS-SKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES
        M + I S   SA E  G  G S   S +K  CLCSPTTHPGSFRCR+HRS SL  ++       S +A++  D  PK  +S
Subjt:  MSIRIPSTAKSAGEGDGVLGHSHSCS-SKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVES

AT3G13227.1 serine-rich protein-related3.4e-0854.35Show/hide
Query:  PSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNS
        P   +  G G G +G S S S +  CLC+PTTHPGSFRCR HR N+
Subjt:  PSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNS

AT5G11090.1 serine-rich protein-related7.8e-0550Show/hide
Query:  HSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKS
        H+H  S +  C+CSPTTHPGSFRC LH++ + P  + + S
Subjt:  HSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCCCAGGCCAAAATGAGCATCAGAATCCCTTCCACCGCCAAAAGCGCCGGCGAAGGGGACGGCGTGTTGGGGCACTCTCACTCATGTTCATCAAAAGGCCAATG
CCTCTGTTCCCCCACCACTCATCCCGGTTCCTTCCGGTGTCGGCTTCACCGTTCCAATTCCTTGCCATGGAGTAGGCAGTCCAAATCCACCGCTGCATCGGCCGACGCCT
CTAACACCTCAGATCTCTCTCCAAAGTCAGTTGAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
GACGAGGATGGACACGTGGAATAGTGATAGTGGTTGAGATCCAGGGCGGTTTTTGTATAAATTCCCCGATCTGTAATTTAGAAATGGGTTTGCAAAAATGGGATCCCAGG
CCAAAATGAGCATCAGAATCCCTTCCACCGCCAAAAGCGCCGGCGAAGGGGACGGCGTGTTGGGGCACTCTCACTCATGTTCATCAAAAGGCCAATGCCTCTGTTCCCCC
ACCACTCATCCCGGTTCCTTCCGGTGTCGGCTTCACCGTTCCAATTCCTTGCCATGGAGTAGGCAGTCCAAATCCACCGCTGCATCGGCCGACGCCTCTAACACCTCAGA
TCTCTCTCCAAAGTCAGTTGAATCTGCTTGATTTTTCAGTTACCATCTATCGGCCGAAACAACAAATAAAGAAATCCTCTGTAAATATTTATGTACTCCTCTCGCTCTCT
CTCTCTGTTCTCACTCCACTCTTAAAATTTATTACAAATCAAAGTCGGTTTATGTGTGTGTGTTTTGTTATGCTTTCATTTTAGTTTTTACTCAATTTTCTATAATTGAG
ATTTCAGATTTCCTTTGTTAATGTTAATGCTTCTTCTCTCTGTTTCTGCCGTTTCTCTTCTTTTTTAACTCTTTCTTTTTTAACTTTTAATTTATATATACTTTTATG
Protein sequenceShow/hide protein sequence
MGSQAKMSIRIPSTAKSAGEGDGVLGHSHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSTAASADASNTSDLSPKSVESA