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CSPI01G19300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G19300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionserine-rich protein-related
Genome locationChr1:14762361..14762630
RNA-Seq ExpressionCSPI01G19300
SyntenyCSPI01G19300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046597.1 hypothetical protein E6C27_scaffold114G001380 [Cucumis melo var. makuwa]7.9e-3985.56Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK
        MCYPHHFL R DF S QCNWVLFQT PAE+ T AIESCGDESGKRRCLCSPT HPGSFRCRLHR+EYVWVARRRTVKN SAE K+LTNDK
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK

KAG6589902.1 hypothetical protein SDJN03_15325, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2363.04Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGK--ILTNDK
        MCYPH    RR+F ++QCNWVL QT     A  A+ES G ES K+RCLCSPTRHPGSFRCRLHR+EYVWV R R VK+G A  K   L ND+
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGK--ILTNDK

KGN65356.1 hypothetical protein Csa_020011 [Cucumis sativus]6.0e-4798.89Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK
        MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNG AEGKILTNDK
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK

RDX89769.1 hypothetical protein CR513_28465, partial [Mucuna pruriens]9.4e-0843.06Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQTT---PAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVW
        MC P     +R+   L   W++FQ++   P +D   A  S  + +  +RC+CSP++HPGSFRCRLH  EYVW
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQTT---PAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVW

TKY44651.1 hypothetical protein E2542_SST30928 [Spatholobus suberectus]3.2e-0844.59Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQ-TTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARR
        MC+P      R+ S +   W++FQ    AE       S G+    +RC+CSP++HPGSFRCRLH  EYVW  RR
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQ-TTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARR

TrEMBL top hitse value%identityAlignment
A0A0A0LZG6 Uncharacterized protein2.9e-4798.89Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK
        MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNG AEGKILTNDK
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK

A0A151S3D7 Uncharacterized protein3.0e-0741.25Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCG---DESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVK
        MC+P      R+   +   W++FQ    E A   +   G   + +  +RC+CSP++HPGSFRCRLH  EYVW  R RT+K
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCG---DESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVK

A0A371GGR7 Uncharacterized protein (Fragment)4.6e-0843.06Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQTT---PAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVW
        MC P     +R+   L   W++FQ++   P +D   A  S  + +  +RC+CSP++HPGSFRCRLH  EYVW
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQTT---PAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVW

A0A444Z029 Uncharacterized protein1.3e-0743.37Show/hide
Query:  MCYP-HHFLSRRDFSSLQCNWVLFQT-TPAEDATPAIESC-----GDESGK----RRCLCSPTRHPGSFRCRLHRNEYVWVAR
        MCYP   ++S+     +   WV+FQ  T A  A  A+ +      GD SG+    +RC+CSP++HPGSFRCR H  EYVW  R
Subjt:  MCYP-HHFLSRRDFSSLQCNWVLFQT-TPAEDATPAIESC-----GDESGK----RRCLCSPTRHPGSFRCRLHRNEYVWVAR

A0A5A7TXE6 Uncharacterized protein3.8e-3985.56Show/hide
Query:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK
        MCYPHHFL R DF S QCNWVLFQT PAE+ T AIESCGDESGKRRCLCSPT HPGSFRCRLHR+EYVWVARRRTVKN SAE K+LTNDK
Subjt:  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein1.7e-0741.51Show/hide
Query:  DATPAIESCGD-ESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSA
        +AT    S GD   GK++C+CSP++HP SF+CR H++EY W+    +  + S+
Subjt:  DATPAIESCGD-ESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSA

AT1G67910.1 unknown protein2.7e-0577.27Show/hide
Query:  KRRCLCSPTRHPGSFRCRLHRN
        K  CLCSPT HPGSFRCR+HR+
Subjt:  KRRCLCSPTRHPGSFRCRLHRN

AT5G11090.1 serine-rich protein-related1.6e-0580.95Show/hide
Query:  RRCLCSPTRHPGSFRCRLHRN
        RRC+CSPT HPGSFRC LH+N
Subjt:  RRCLCSPTRHPGSFRCRLHRN

AT5G25280.1 serine-rich protein-related9.4e-0677.27Show/hide
Query:  KRRCLCSPTRHPGSFRCRLHRN
        +RRC+CSPT HPGSFRC LH+N
Subjt:  KRRCLCSPTRHPGSFRCRLHRN

AT5G25280.2 serine-rich protein-related9.4e-0677.27Show/hide
Query:  KRRCLCSPTRHPGSFRCRLHRN
        +RRC+CSPT HPGSFRC LH+N
Subjt:  KRRCLCSPTRHPGSFRCRLHRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTACCCACACCATTTCCTGTCTCGCAGGGACTTTTCGTCCTTGCAATGCAATTGGGTTCTCTTTCAGACCACACCCGCGGAGGACGCGACACCGGCGATTGAGAG
TTGCGGTGATGAGTCGGGGAAAAGGCGGTGCTTGTGCTCGCCGACAAGGCACCCAGGGTCGTTTCGTTGCAGGCTACACAGAAATGAGTATGTTTGGGTTGCACGGCGGA
GGACGGTTAAAAATGGATCGGCGGAGGGTAAAATATTGACGAACGATAAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTACCCACACCATTTCCTGTCTCGCAGGGACTTTTCGTCCTTGCAATGCAATTGGGTTCTCTTTCAGACCACACCCGCGGAGGACGCGACACCGGCGATTGAGAG
TTGCGGTGATGAGTCGGGGAAAAGGCGGTGCTTGTGCTCGCCGACAAGGCACCCAGGGTCGTTTCGTTGCAGGCTACACAGAAATGAGTATGTTTGGGTTGCACGGCGGA
GGACGGTTAAAAATGGATCGGCGGAGGGTAAAATATTGACGAACGATAAG
Protein sequenceShow/hide protein sequence
MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGSAEGKILTNDK