| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN69911.1 hypothetical protein VITISV_027081 [Vitis vinifera] | 3.2e-139 | 70.46 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFE--------------------QKFSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLY
GLAASLDLE+++MDVKTAFLHGDL KEIYMEQPEGF+ + SRIDNLKKQLSKSFAMK+LGP K++L IRI RDRA KKL
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFE--------------------QKFSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLY
Query: MSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLR
M Q+QYIEK+L RF MS+AK VSSPL HFKL S+ +PSTDKEKEDM +V YASAVGSLMY MVCTR +IA+A+GVV RF+SNPG+ HWEAVK IMRYLR
Subjt: MSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLR
Query: GTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA--------KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQS
GTS LKLTFG GKPIL GYTD DMA D+D+RRST GYLMTF+GG KCVALSTT+A+YIA EAC E+LWMK F+QELGFKQQRYV+YCDNQS
Subjt: GTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA--------KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQS
Query: AIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKLEFCRSTVGMTNS
AIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLTK LP KL C S GM +S
Subjt: AIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKLEFCRSTVGMTNS
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| RVW24009.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 8.5e-140 | 65.24 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
GLAASLDLE+++MDVKTAFLHGDLDKEIYMEQPEG F QKF
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
Query: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
SRIDNLKKQLSKSFAMK+LGP K++L IRI RDRASKKL M Q+QYIEKVL RF M +AK VSSPL HFKL S+ SPSTDKEKEDM +
Subjt: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
Query: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
VPYASAVGSLMYAMVCTR +IA+AVGVVSRF+SNPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL GYTD DMA D+D+RRSTSGYLMTF+GGA
Subjt: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
Query: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
KCVALSTT+A+YIA AEACKE+LWMK F+QELGFKQQRYV+YCDNQSAIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLT
Subjt: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
Query: KNLPISKLEFCRSTVGMTNS
K LP KL C S GM +S
Subjt: KNLPISKLEFCRSTVGMTNS
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| RVW24680.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.5e-139 | 64.78 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
GLAASLDLE+++MDVKTAFLHGDLDKEIYMEQPEG F QKF
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
Query: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
SRID+LKKQLSKSFAMK+LGP K++L IRI +DRASKKL M Q+QYIEKVL RF MS+AK VSSPL HFKL S+ SPSTDKEKEDM +
Subjt: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
Query: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
VPYASAVGSLMYAMVCTR +IA+AVGVVSRF+SNPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL GYTD DMA D+D+RRSTSGYLMTF+GGA
Subjt: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
Query: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
KCVALSTT+A+YIA AEACKE+LWMK F+QELGFKQQRYV+YCDNQSAIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLT
Subjt: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
Query: KNLPISKLEFCRSTVGMTNSFSK
K LP KL C S GM +S S+
Subjt: KNLPISKLEFCRSTVGMTNSFSK
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| RVW27439.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.5e-139 | 64.56 | Show/hide |
Query: QSHVTKQDWLSKGSVRRKGLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFEQK-------------------------------------------
+ H ++ + ++ V+R S DLE+++MDVKTAFLHGDLDKEIYMEQPEGF K
Subjt: QSHVTKQDWLSKGSVRRKGLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFEQK-------------------------------------------
Query: --FSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVG
SRIDNLKKQLSKSFAMK+LGP K++L IRI RDRASKKL M Q+QYIEKV RF MS+ K VSSPL HFKL S+ SPSTDKEKEDM +VPYASA+G
Subjt: --FSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVG
Query: SLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA--------KCVA
SLMYAMVCTR +IA+AVGVVSRF+SNPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL GYTD DMA D+D+R+STSGYLMTF+GGA KCVA
Subjt: SLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA--------KCVA
Query: LSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKL
LSTT+A+YIA EACKE+LWMK F+QELGFKQQRYV+YCDNQSAIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLTK LP KL
Subjt: LSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKL
Query: EFCRSTVGMTNS
C S GM +S
Subjt: EFCRSTVGMTNS
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| RVW85908.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 9.4e-139 | 64.76 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
GLAASLDLE+++MDVKTAFLHGDLDKEIYMEQPEG F QKF
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
Query: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
SRIDNLKKQLSKSFAMK+LGP K++L IRI RDRASKKL M Q+QYIEKVL RF MS+AK VSSPL HFKL S+ SPSTDKEKEDM +
Subjt: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
Query: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
VPYASAVGSLMY MVCTR +IA++VGVVSRF+SNPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL GYTD DMA D+D+RRSTSGYL TF+GGA
Subjt: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
Query: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
KCV LSTT+A+YIA AEACKE+LWMK F+QELGFKQQRYV+YCDNQSAIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLT
Subjt: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
Query: KNLPISKLEFCRSTVGMTNS
K LP KL C S VGM +S
Subjt: KNLPISKLEFCRSTVGMTNS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438CLF9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-140 | 65.24 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
GLAASLDLE+++MDVKTAFLHGDLDKEIYMEQPEG F QKF
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
Query: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
SRIDNLKKQLSKSFAMK+LGP K++L IRI RDRASKKL M Q+QYIEKVL RF M +AK VSSPL HFKL S+ SPSTDKEKEDM +
Subjt: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
Query: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
VPYASAVGSLMYAMVCTR +IA+AVGVVSRF+SNPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL GYTD DMA D+D+RRSTSGYLMTF+GGA
Subjt: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
Query: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
KCVALSTT+A+YIA AEACKE+LWMK F+QELGFKQQRYV+YCDNQSAIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLT
Subjt: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
Query: KNLPISKLEFCRSTVGMTNS
K LP KL C S GM +S
Subjt: KNLPISKLEFCRSTVGMTNS
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| A0A438CN91 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-140 | 64.78 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
GLAASLDLE+++MDVKTAFLHGDLDKEIYMEQPEG F QKF
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
Query: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
SRID+LKKQLSKSFAMK+LGP K++L IRI +DRASKKL M Q+QYIEKVL RF MS+AK VSSPL HFKL S+ SPSTDKEKEDM +
Subjt: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
Query: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
VPYASAVGSLMYAMVCTR +IA+AVGVVSRF+SNPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL GYTD DMA D+D+RRSTSGYLMTF+GGA
Subjt: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
Query: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
KCVALSTT+A+YIA AEACKE+LWMK F+QELGFKQQRYV+YCDNQSAIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLT
Subjt: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
Query: KNLPISKLEFCRSTVGMTNSFSK
K LP KL C S GM +S S+
Subjt: KNLPISKLEFCRSTVGMTNSFSK
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| A0A438CW59 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-139 | 64.56 | Show/hide |
Query: QSHVTKQDWLSKGSVRRKGLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFEQK-------------------------------------------
+ H ++ + ++ V+R S DLE+++MDVKTAFLHGDLDKEIYMEQPEGF K
Subjt: QSHVTKQDWLSKGSVRRKGLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFEQK-------------------------------------------
Query: --FSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVG
SRIDNLKKQLSKSFAMK+LGP K++L IRI RDRASKKL M Q+QYIEKV RF MS+ K VSSPL HFKL S+ SPSTDKEKEDM +VPYASA+G
Subjt: --FSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVG
Query: SLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA--------KCVA
SLMYAMVCTR +IA+AVGVVSRF+SNPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL GYTD DMA D+D+R+STSGYLMTF+GGA KCVA
Subjt: SLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA--------KCVA
Query: LSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKL
LSTT+A+YIA EACKE+LWMK F+QELGFKQQRYV+YCDNQSAIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLTK LP KL
Subjt: LSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKL
Query: EFCRSTVGMTNS
C S GM +S
Subjt: EFCRSTVGMTNS
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| A0A438HN89 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.6e-139 | 64.76 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
GLAASLDLE+++MDVKTAFLHGDLDKEIYMEQPEG F QKF
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG-------------------------------------------------FEQKF-----------
Query: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
SRIDNLKKQLSKSFAMK+LGP K++L IRI RDRASKKL M Q+QYIEKVL RF MS+AK VSSPL HFKL S+ SPSTDKEKEDM +
Subjt: -----------SRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSK
Query: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
VPYASAVGSLMY MVCTR +IA++VGVVSRF+SNPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL GYTD DMA D+D+RRSTSGYL TF+GGA
Subjt: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA----
Query: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
KCV LSTT+A+YIA AEACKE+LWMK F+QELGFKQQRYV+YCDNQSAIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLT
Subjt: ----KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLT
Query: KNLPISKLEFCRSTVGMTNS
K LP KL C S VGM +S
Subjt: KNLPISKLEFCRSTVGMTNS
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| A5BAF2 Integrase catalytic domain-containing protein | 1.6e-139 | 70.46 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFE--------------------QKFSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLY
GLAASLDLE+++MDVKTAFLHGDL KEIYMEQPEGF+ + SRIDNLKKQLSKSFAMK+LGP K++L IRI RDRA KKL
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFE--------------------QKFSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLY
Query: MSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLR
M Q+QYIEK+L RF MS+AK VSSPL HFKL S+ +PSTDKEKEDM +V YASAVGSLMY MVCTR +IA+A+GVV RF+SNPG+ HWEAVK IMRYLR
Subjt: MSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLR
Query: GTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA--------KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQS
GTS LKLTFG GKPIL GYTD DMA D+D+RRST GYLMTF+GG KCVALSTT+A+YIA EAC E+LWMK F+QELGFKQQRYV+YCDNQS
Subjt: GTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA--------KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQS
Query: AIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKLEFCRSTVGMTNS
AIHL KN+++H+R+KHIDVRYHW+RDALND LFE+EKIHTD+NGSDMLTK LP KL C S GM +S
Subjt: AIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKLEFCRSTVGMTNS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.2e-45 | 30.57 | Show/hide |
Query: LAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG----------------------------FEQ-----------------------------------
L +L+V +MDVKTAFL+G L +EIYM P+G FEQ
Subjt: LAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEG----------------------------FEQ-----------------------------------
Query: -------KFSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLP--IHFKLISKQSPSTDKEKEDMSK
+R++N K+ L + F M +L K + IRI + K+Y+SQ Y++K+L +F M +VS+PLP I+++L++ ++
Subjt: -------KFSRIDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLP--IHFKLISKQSPSTDKEKEDMSK
Query: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPI---LAGYTDLDMARDLDSRRSTSGYLM-TFAGGA
P S +G LMY M+CTR ++ AV ++SR+ S + W+ +K ++RYL+GT +KL F + GY D D A R+ST+GYL F
Subjt: VPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPI---LAGYTDLDMARDLDSRRSTSGYLM-TFAGGA
Query: KC--------VALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYV-IYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNG
C VA S+T+A+Y+A EA +E LW+K + + K + + IY DNQ I + N S H R KHID++YH+ R+ + + + LE I T++
Subjt: KC--------VALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYV-IYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNG
Query: SDMLTKNLPISKLEFCRSTVGM
+D+ TK LP ++ R +G+
Subjt: SDMLTKNLPISKLEFCRSTVGM
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| P0CV72 Secreted RxLR effector protein 161 | 7.3e-25 | 47.37 | Show/hide |
Query: MSKVPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTF-GDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA
M VPY SAVG++MY MV TR ++A AVGV+S+F S+P HW+A+K ++RYL+ T + L F G L GY+D D A D++SRRSTSGYL GG
Subjt: MSKVPYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTF-GDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA
Query: --------KCVALSTTKAKYIATAEACKEMLWM
+ VALS+T+ +Y+A +EA +E +W+
Subjt: --------KCVALSTTKAKYIATAEACKEMLWM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-112 | 52.88 | Show/hide |
Query: LAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFE-------------------------------------------------QKFSR----------
LAASLDLEVE++DVKTAFLHGDL++EIYMEQPEGFE ++FS
Subjt: LAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFE-------------------------------------------------QKFSR----------
Query: ------------IDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKV
I LK LSKSF MK+LGP +++L ++IVR+R S+KL++SQ++YIE+VLERF M AK VS+PL H KL K P+T +EK +M+KV
Subjt: ------------IDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKV
Query: PYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA-----
PY+SAVGSLMYAMVCTR +IAHAVGVVSRF+ NPGK+HWEAVK I+RYLRGT+ L FG PIL GYTD DMA D+D+R+S++GYL TF+GGA
Subjt: PYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPILAGYTDLDMARDLDSRRSTSGYLMTFAGGA-----
Query: ---KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTK
KCVALSTT+A+YIA E KEM+W+KRF+QELG Q+ YV+YCD+QSAI L KN+ +H+RTKHIDVRYHW+R+ ++DE ++ KI T+ N +DMLTK
Subjt: ---KCVALSTTKAKYIATAEACKEMLWMKRFVQELGFKQQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTK
Query: NLPISKLEFCRSTVGM
+P +K E C+ VGM
Subjt: NLPISKLEFCRSTVGM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.2e-29 | 32.9 | Show/hide |
Query: IDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVGSLMYA
+ N LS+ F++K+ L I R L++SQ++YI +L R M AK V++P+ KL E Y VGSL Y
Subjt: IDNLKKQLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKVPYASAVGSLMYA
Query: MVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPI-LAGYTDLDMARDLDSRRSTSGYLMTF--------AGGAKCVALSTT
+ TR +I++AV +S+FM P ++H +A+K I+RYL GT + + G + L Y+D D A D D ST+GY++ + K V S+T
Subjt: MVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPI-LAGYTDLDMARDLDSRRSTSGYLMTF--------AGGAKCVALSTT
Query: KAKYIATAEACKEMLWMKRFVQELGFKQQR-YVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKLEFC
+A+Y + A EM W+ + ELG + R VIYCDN A +L N FHSR KHI + YH++R+ + + + T +D LTK L + +
Subjt: KAKYIATAEACKEMLWMKRFVQELGFKQQR-YVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDMLTKNLPISKLEFC
Query: RSTVGMT
S +G+T
Subjt: RSTVGMT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.1e-28 | 27.98 | Show/hide |
Query: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFEQK---------FSRIDNLKK-------------------------------------------
G+A + ++DV AFL G L E+YM QP GF K I LK+
Subjt: GLAASLDLEVEKMDVKTAFLHGDLDKEIYMEQPEGFEQK---------FSRIDNLKK-------------------------------------------
Query: ------------------QLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKV
LS+ F++KE L I R + L++SQ++Y +L R M AK V++P+ KL E
Subjt: ------------------QLSKSFAMKELGPTKKVLRIRIVRDRASKKLYMSQKQYIEKVLERFKMSQAKSVSSPLPIHFKLISKQSPSTDKEKEDMSKV
Query: PYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPI-LAGYTDLDMARDLDSRRSTSGYLMTF--------
Y VGSL Y + TR ++++AV +S++M P HW A+K ++RYL GT + G + L Y+D D A D D ST+GY++
Subjt: PYASAVGSLMYAMVCTRSNIAHAVGVVSRFMSNPGKQHWEAVKCIMRYLRGTSSLKLTFGDGKPI-LAGYTDLDMARDLDSRRSTSGYLMTF--------
Query: AGGAKCVALSTTKAKYIATAEACKEMLWMKRFVQELGFK-QQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDML
+ K V S+T+A+Y + A E+ W+ + ELG + VIYCDN A +L N FHSR KHI + YH++R+ + + + T +D L
Subjt: AGGAKCVALSTTKAKYIATAEACKEMLWMKRFVQELGFK-QQRYVIYCDNQSAIHLGKNASFHSRTKHIDVRYHWLRDALNDELFELEKIHTDHNGSDML
Query: TKNLPISKLEF
TK P+S++ F
Subjt: TKNLPISKLEF
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