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CSPI01G19340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G19340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFRIGIDA-like protein
Genome locationChr1:14788904..14789253
RNA-Seq ExpressionCSPI01G19340
SyntenyCSPI01G19340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653121.1 hypothetical protein Csa_019717, partial [Cucumis sativus]1.2e-52100Show/hide
Query:  MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATF
        MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATF
Subjt:  MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATF

Query:  LHKQHL
        LHKQHL
Subjt:  LHKQHL

KAG5009349.1 hypothetical protein JHK87_017864 [Glycine soja]3.4e-1250.59Show/hide
Query:  KQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL
        K     WKVLW KL++EK+K+ ES       +S P  +PYDP++YSQNFDQGTA +E DN SRSFS RF  AD +++  L K+ +
Subjt:  KQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL

KAG6587950.1 hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2368Show/hide
Query:  RKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQ
        +K  + TIRLG WR  +  QPN+WKVLWRKLRREKR      N TT YSSG  LIPYDPFSYS NFDQG A EE D L RSFSARFALAD ASA FL  Q
Subjt:  RKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQ

KAG7021839.1 hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2265Show/hide
Query:  RKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQ
        +K  + TIRLG WR  +  QPN+WK+LWRKLRR+KR      N TT YSSG  LIPYDPFSYS NFDQG A E+ D L RSFSARFALAD ASA FL  Q
Subjt:  RKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQ

QCD92116.1 hypothetical protein DEO72_LG5g177 [Vigna unguiculata]2.0e-1254.43Show/hide
Query:  WKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL
        WKVLW KL++EK+K+ ES+      SS P  +PYDP++YS NFD+GTA +E DNLSRSFSA+F  AD +S+  L K+ +
Subjt:  WKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX3 Uncharacterized protein5.6e-53100Show/hide
Query:  MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATF
        MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATF
Subjt:  MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATF

Query:  LHKQHL
        LHKQHL
Subjt:  LHKQHL

A0A151S3I6 Uncharacterized protein3.7e-1260.94Show/hide
Query:  WKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFA
        WKVLW KL++EK+K+ ES++        P  +PYDP+SYSQNFDQGTA +E DNLSRSF  RFA
Subjt:  WKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFA

A0A371GGA5 Uncharacterized protein (Fragment)4.8e-1259.38Show/hide
Query:  WKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFA
        WK+LW KL++EK+K+ ES++        P  +PYDP++YSQNFDQGTA +E DNLSRSFS RFA
Subjt:  WKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFA

A0A4D6LVT9 Uncharacterized protein9.6e-1354.43Show/hide
Query:  WKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL
        WKVLW KL++EK+K+ ES+      SS P  +PYDP++YS NFD+GTA +E DNLSRSFSA+F  AD +S+  L K+ +
Subjt:  WKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL

I1KIS1 Uncharacterized protein1.6e-1250.59Show/hide
Query:  KQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL
        K     WKVLW KL++EK+K+ ES       +S P  +PYDP++YSQNFDQGTA +E DN SRSFS RF  AD +++  L K+ +
Subjt:  KQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25735.1 unknown protein1.5e-0538.95Show/hide
Query:  RTTIRLGGWRGENKQQPN---------MWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTA---GEELDNLSRSFSARFA
        R TI LG +    ++Q            WKVL  KL     K+L S  ++T      K++ Y+P  YS NFDQG      +E +NLSRSFS RFA
Subjt:  RTTIRLGGWRGENKQQPN---------MWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTA---GEELDNLSRSFSARFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTATGAGGAAGCAAGGGAGAACAACGATCAGATTGGGAGGTTGGAGAGGAGAAAATAAGCAACAGCCAAATATGTGGAAGGTTTTATGGAGGAAATTAAGAAG
AGAAAAGAGGAAGATTTTAGAGTCGTCTAATACAACCACGTTTTATTCGTCAGGCCCCAAGTTGATTCCTTATGATCCCTTCTCTTATTCTCAGAATTTCGATCAAGGCA
CCGCCGGAGAAGAACTTGACAATCTTTCCCGATCCTTCTCCGCCCGCTTTGCTCTAGCCGATGTCGCTTCCGCAACCTTTCTTCACAAACAACATCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
CCCAAATAAAAAAGATCTTCAAAGTGATGAAAATTATGAGGAAGCAAGGGAGAACAACGATCAGATTGGGAGGTTGGAGAGGAGAAAATAAGCAACAGCCAAATATGTGG
AAGGTTTTATGGAGGAAATTAAGAAGAGAAAAGAGGAAGATTTTAGAGTCGTCTAATACAACCACGTTTTATTCGTCAGGCCCCAAGTTGATTCCTTATGATCCCTTCTC
TTATTCTCAGAATTTCGATCAAGGCACCGCCGGAGAAGAACTTGACAATCTTTCCCGATCCTTCTCCGCCCGCTTTGCTCTAGCCGATGTCGCTTCCGCAACCTTTCTTC
ACAAACAACATCTTCAATAA
Protein sequenceShow/hide protein sequence
MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPYDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHLQ