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CSPI01G19510 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G19510
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationChr1:15125262..15125693
RNA-Seq ExpressionCSPI01G19510
SyntenyCSPI01G19510
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.4e-2954.69Show/hide
Query:  DECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIG-SSPSIERITLMANTKNRFSFERSKKKNTQPICSNC
        ++CTC G K  I  L +E+ M FLMGLN+SY+  RAQILL+ PLP IN VFSL+IQEE+QRS G  +P I+ + L   +    S +R++KK  +P CS C
Subjt:  DECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIG-SSPSIERITLMANTKNRFSFERSKKKNTQPICSNC

Query:  GCRGHIADKCYKLHGYPPGHRLANNNSV
        G +GHIADKCYK HGYPPG++  N+NS+
Subjt:  GCRGHIADKCYKLHGYPPGHRLANNNSV

KAF5480412.1 hypothetical protein F2P56_001165 [Juglans regia]1.2e-2546.04Show/hide
Query:  MDECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQR--SIGSSPSIERITLMAN--TKNRFSFER-SKKKNTQP
        + +CTC   KK + F   E+ M FLMGLN+S++  R QILL+DPLP +N+VFSL++QEE+QR   I S+PS + +  M     KN  +F R S  +  +P
Subjt:  MDECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQR--SIGSSPSIERITLMAN--TKNRFSFER-SKKKNTQP

Query:  ICSNCGCRGHIADKCYKLHGYPPGHRLANNNSVHQQGRI
        ICS+CG  GH +DKCY++HG+PPG +   +N VH   ++
Subjt:  ICSNCGCRGHIADKCYKLHGYPPGHRLANNNSVHQQGRI

PSS08363.1 Aldehyde dehydrogenase family 16 member like, partial [Actinidia chinensis var. chinensis]2.1e-2548.84Show/hide
Query:  CTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGSSPSIERITLMANTKNRF-----------SFERSKKKN
        C C G K  + +   E+ M FLMGLNESY+  R QIL++DPLP ++KVF+L+IQEERQRSIGS  SI   +L  +T +             S   SK K+
Subjt:  CTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGSSPSIERITLMANTKNRF-----------SFERSKKKN

Query:  TQPICSNCGCRGHIADKCYKLHGYPPGHR
         +P+CS CG  GH  D+CYKLH YPPG++
Subjt:  TQPICSNCGCRGHIADKCYKLHGYPPGHR

XP_022145891.1 uncharacterized protein LOC111015239 [Momordica charantia]8.2e-3054.4Show/hide
Query:  ECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGS-SPSIERITL-MANTKNRFSFERSKKKNTQPICSNC
        +CTC G K +  F  +E+ M FLMGLNESY++ RAQILL+DP+P +NKVFSL+IQEERQR+IG+ +P +  + + +A    R S  + ++K+ +  C++C
Subjt:  ECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGS-SPSIERITL-MANTKNRFSFERSKKKNTQPICSNC

Query:  GCRGHIADKCYKLHGYPPGHRLANN
        G RGH+ DKCYKLHGYPPG+R ANN
Subjt:  GCRGHIADKCYKLHGYPPGHRLANN

XP_038896914.1 uncharacterized protein LOC120085123 [Benincasa hispida]3.9e-3263.64Show/hide
Query:  MIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSI-GSSPSIERITLMAN---TKNRFSFERSKKKNTQPICSNCGCRGHIA
        M+ FLN EF MIFLMGLN+SY+Q RAQILLID L  INKVFSLIIQEERQRSI  +S S+E ITLMAN    K   S +  +K   + ICS CG +GHI 
Subjt:  MIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSI-GSSPSIERITLMAN---TKNRFSFERSKKKNTQPICSNCGCRGHIA

Query:  DKCYKLHGYPPGHRLANNNSVHQQGRIILSKS
        DKCYKLHGYPP HRL  N S+HQ+  I+ S S
Subjt:  DKCYKLHGYPPGHRLANNNSVHQQGRIILSKS

TrEMBL top hitse value%identityAlignment
A0A2N9HKE6 Uncharacterized protein2.3e-2545.71Show/hide
Query:  ECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSI---GSSPSIERITLMAN---TKNRFSFERSKKKNTQPI
        +C+C   K ++     E+ M FLMGLN+S+S  RAQIL+ DPLP I K F+L+IQEERQR+I     +P+ + + L      T++ +   +S KK+ +PI
Subjt:  ECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSI---GSSPSIERITLMAN---TKNRFSFERSKKKNTQPI

Query:  CSNCGCRGHIADKCYKLHGYPPGHRL-ANNNSVHQQGRII
        CS+CG  GH  DKCYKLHGYPPG++  A  +S HQ   ++
Subjt:  CSNCGCRGHIADKCYKLHGYPPGHRL-ANNNSVHQQGRII

A0A2R6QID4 Aldehyde dehydrogenase family 16 member like (Fragment)1.0e-2548.84Show/hide
Query:  CTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGSSPSIERITLMANTKNRF-----------SFERSKKKN
        C C G K  + +   E+ M FLMGLNESY+  R QIL++DPLP ++KVF+L+IQEERQRSIGS  SI   +L  +T +             S   SK K+
Subjt:  CTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGSSPSIERITLMANTKNRF-----------SFERSKKKN

Query:  TQPICSNCGCRGHIADKCYKLHGYPPGHR
         +P+CS CG  GH  D+CYKLH YPPG++
Subjt:  TQPICSNCGCRGHIADKCYKLHGYPPGHR

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 86.8e-3054.69Show/hide
Query:  DECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIG-SSPSIERITLMANTKNRFSFERSKKKNTQPICSNC
        ++CTC G K  I  L +E+ M FLMGLN+SY+  RAQILL+ PLP IN VFSL+IQEE+QRS G  +P I+ + L   +    S +R++KK  +P CS C
Subjt:  DECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIG-SSPSIERITLMANTKNRFSFERSKKKNTQPICSNC

Query:  GCRGHIADKCYKLHGYPPGHRLANNNSV
        G +GHIADKCYK HGYPPG++  N+NS+
Subjt:  GCRGHIADKCYKLHGYPPGHRLANNNSV

A0A5J5B7Z9 Uncharacterized protein1.7e-2548.51Show/hide
Query:  CTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGS--SPSIERITLMANTKNRFSFERSKK-----KNTQPI
        CTC  SK ++ +   E  M FLMGLNESYS  R Q+LL+DPLP INKVFSLI+QEERQR + S   P++E   L+++         +K+     K  +P 
Subjt:  CTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGS--SPSIERITLMANTKNRFSFERSKK-----KNTQPI

Query:  CSNCGCRGHIADKCYKLHGYPPGHRLANNNSVHQ
        C++C   GH   +CYKLHGYPPGHRL    S +Q
Subjt:  CSNCGCRGHIADKCYKLHGYPPGHRLANNNSVHQ

A0A6J1CXR2 uncharacterized protein LOC1110152394.0e-3054.4Show/hide
Query:  ECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGS-SPSIERITL-MANTKNRFSFERSKKKNTQPICSNC
        +CTC G K +  F  +E+ M FLMGLNESY++ RAQILL+DP+P +NKVFSL+IQEERQR+IG+ +P +  + + +A    R S  + ++K+ +  C++C
Subjt:  ECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGS-SPSIERITL-MANTKNRFSFERSKKKNTQPICSNC

Query:  GCRGHIADKCYKLHGYPPGHRLANN
        G RGH+ DKCYKLHGYPPG+R ANN
Subjt:  GCRGHIADKCYKLHGYPPGHRLANN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATGTACCTGTGAAGGGTCAAAGAAGATGATCGTTTTTTTAAATGCTGAGTTTGAGATGATTTTCCTTATGGGATTGAATGAGTCCTACTCCCAATTCCGAGC
ACAAATCTTGCTTATTGATCCCTTGCCACTAATAAATAAAGTATTCTCTCTTATCATCCAAGAAGAAAGACAGAGATCCATTGGATCTTCCCCTTCCATTGAAAGAATTA
CGTTGATGGCTAATACTAAGAATAGATTCTCTTTCGAAAGGTCCAAGAAGAAAAACACACAGCCGATATGTTCTAATTGTGGTTGCAGAGGCCACATTGCTGACAAGTGC
TATAAGCTACATGGATACCCACCAGGACACAGATTGGCAAATAATAATTCAGTGCATCAACAAGGTAGAATAATTCTGTCCAAATCGAAAGTGAGAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAATGTACCTGTGAAGGGTCAAAGAAGATGATCGTTTTTTTAAATGCTGAGTTTGAGATGATTTTCCTTATGGGATTGAATGAGTCCTACTCCCAATTCCGAGC
ACAAATCTTGCTTATTGATCCCTTGCCACTAATAAATAAAGTATTCTCTCTTATCATCCAAGAAGAAAGACAGAGATCCATTGGATCTTCCCCTTCCATTGAAAGAATTA
CGTTGATGGCTAATACTAAGAATAGATTCTCTTTCGAAAGGTCCAAGAAGAAAAACACACAGCCGATATGTTCTAATTGTGGTTGCAGAGGCCACATTGCTGACAAGTGC
TATAAGCTACATGGATACCCACCAGGACACAGATTGGCAAATAATAATTCAGTGCATCAACAAGGTAGAATAATTCTGTCCAAATCGAAAGTGAGAAGATAA
Protein sequenceShow/hide protein sequence
MDECTCEGSKKMIVFLNAEFEMIFLMGLNESYSQFRAQILLIDPLPLINKVFSLIIQEERQRSIGSSPSIERITLMANTKNRFSFERSKKKNTQPICSNCGCRGHIADKC
YKLHGYPPGHRLANNNSVHQQGRIILSKSKVRR