; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G19620 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G19620
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontudor domain-containing protein 3
Genome locationChr1:15260850..15262331
RNA-Seq ExpressionCSPI01G19620
SyntenyCSPI01G19620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653142.1 hypothetical protein Csa_020071 [Cucumis sativus]1.4e-9497.98Show/hide
Query:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHRGKGRMED
        QQESSSKSNRPSADSGNIEGK TIQQQSADMKAT   NSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHRGKGRMED
Subjt:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHRGKGRMED

Query:  QEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRGRGRHY
        QEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRGRGRHY
Subjt:  QEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRGRGRHY

XP_004149862.2 tudor domain-containing protein 3 [Cucumis sativus]1.4e-9497.98Show/hide
Query:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHRGKGRMED
        QQESSSKSNRPSADSGNIEGK TIQQQSADMKAT   NSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHRGKGRMED
Subjt:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHRGKGRMED

Query:  QEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRGRGRHY
        QEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRGRGRHY
Subjt:  QEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRGRGRHY

XP_008463347.1 PREDICTED: tudor domain-containing protein 3 isoform X1 [Cucumis melo]3.7e-8490.15Show/hide
Query:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRNHRGKGRM
        QQESSSKSNRPSADSGN+EGK TIQQQS D+KATNSVNSVSHLEKAEEKPSSSETRPKEV EAVPVQNQAASQKLL+K S+  G R PF +RNHRGKGRM
Subjt:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRNHRGKGRM

Query:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGR-GGGRGRRGRGR--GRG
        EDQEVYTLEEYERRKSGTSQLPKETSSYTN DEELARQLQNKFDLEDFHVQDSTSRTN EDIRMSMFNFERDTYTPHG GRGR GGGRGRRGRGR  GRG
Subjt:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGR-GGGRGRRGRGR--GRG

Query:  RHY
        RHY
Subjt:  RHY

XP_008463350.1 PREDICTED: tudor domain-containing protein 3 isoform X2 [Cucumis melo]3.7e-8490.15Show/hide
Query:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRNHRGKGRM
        QQESSSKSNRPSADSGN+EGK TIQQQS D+KATNSVNSVSHLEKAEEKPSSSETRPKEV EAVPVQNQAASQKLL+K S+  G R PF +RNHRGKGRM
Subjt:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRNHRGKGRM

Query:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGR-GGGRGRRGRGR--GRG
        EDQEVYTLEEYERRKSGTSQLPKETSSYTN DEELARQLQNKFDLEDFHVQDSTSRTN EDIRMSMFNFERDTYTPHG GRGR GGGRGRRGRGR  GRG
Subjt:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGR-GGGRGRRGRGR--GRG

Query:  RHY
        RHY
Subjt:  RHY

XP_038878431.1 tudor domain-containing protein 3 [Benincasa hispida]1.4e-7885.07Show/hide
Query:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRG--CRPFNSRNHRGKGRM
        Q ESSSKSNRP+ADSGNIEGK TIQQQSADMKATN+V S SH+EK EEKPS SETRPKEV EAVPVQNQAASQKLL K SQ+    RPF++RNHRGKGRM
Subjt:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRG--CRPFNSRNHRGKGRM

Query:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPH-GGGRGRGGGRGRRGRGRGRGRH
        EDQ VYTLEEYERRKSGTSQLPKETSS TN DEELARQLQ++FDLED HVQ+S SRTNAE IRMSMFN+ERDTYTPH GGGRGRGGGRGRRGRGRGRGRH
Subjt:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPH-GGGRGRGGGRGRRGRGRGRGRH

Query:  Y
        Y
Subjt:  Y

TrEMBL top hitse value%identityAlignment
A0A0A0LZK1 Uncharacterized protein7.5e-9998.05Show/hide
Query:  MKRVVTDQQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHR
        MKRVVTDQQESSSKSNRPSADSGNIEGK TIQQQSADMKAT   NSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHR
Subjt:  MKRVVTDQQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHR

Query:  GKGRMEDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRG
        GKGRMEDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRG
Subjt:  GKGRMEDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRG

Query:  RGRHY
        RGRHY
Subjt:  RGRHY

A0A1S3CJF1 tudor domain-containing protein 3 isoform X21.8e-8490.15Show/hide
Query:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRNHRGKGRM
        QQESSSKSNRPSADSGN+EGK TIQQQS D+KATNSVNSVSHLEKAEEKPSSSETRPKEV EAVPVQNQAASQKLL+K S+  G R PF +RNHRGKGRM
Subjt:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRNHRGKGRM

Query:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGR-GGGRGRRGRGR--GRG
        EDQEVYTLEEYERRKSGTSQLPKETSSYTN DEELARQLQNKFDLEDFHVQDSTSRTN EDIRMSMFNFERDTYTPHG GRGR GGGRGRRGRGR  GRG
Subjt:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGR-GGGRGRRGRGR--GRG

Query:  RHY
        RHY
Subjt:  RHY

A0A1S4E471 tudor domain-containing protein 3 isoform X11.8e-8490.15Show/hide
Query:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRNHRGKGRM
        QQESSSKSNRPSADSGN+EGK TIQQQS D+KATNSVNSVSHLEKAEEKPSSSETRPKEV EAVPVQNQAASQKLL+K S+  G R PF +RNHRGKGRM
Subjt:  QQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRNHRGKGRM

Query:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGR-GGGRGRRGRGR--GRG
        EDQEVYTLEEYERRKSGTSQLPKETSSYTN DEELARQLQNKFDLEDFHVQDSTSRTN EDIRMSMFNFERDTYTPHG GRGR GGGRGRRGRGR  GRG
Subjt:  EDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGR-GGGRGRRGRGR--GRG

Query:  RHY
        RHY
Subjt:  RHY

A0A5D3BLR7 Tudor domain-containing protein 3 isoform X23.3e-7891.16Show/hide
Query:  MKRVVTDQQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRN
        MKRVVTDQQESSSKSNRPSADSGN+EGK TIQQQS D+KATNSVNSVSHLEKAEEKPSSSETRPKEV EAVPVQNQAASQKLL+K S+  G R PF +RN
Subjt:  MKRVVTDQQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQ-RGCR-PFNSRN

Query:  HRGKGRMEDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTY
        HRGKGRMEDQEVYTLEEYERRKSGTSQLPKETSSYTN DEELARQLQNKFDLEDFHVQDSTSRTN EDIRMSMFNFERDTY
Subjt:  HRGKGRMEDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTY

A0A6J1HDH5 tudor domain-containing protein 34.0e-7681.16Show/hide
Query:  KRVVTDQQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQR--GCRPFNSRNH
        K + + Q ESSSKSNRPSADSGNIEGK TI+QQSAD KA NSVNS SH+EK EEKPSSSETRP+EV EAVPVQNQAASQKLL K SQ+    R F +RNH
Subjt:  KRVVTDQQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQR--GCRPFNSRNH

Query:  RGKGRMEDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHV-QDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRG
        RGKGRMED EVYTLEEYERRKSGTSQLPKETSS TNQDEELAR+LQ +FDLE+ HV Q+S SRTNAE IRMSMFN+ERD+YTPHGGGRGRGGGRGRRGRG
Subjt:  RGKGRMEDQEVYTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHV-QDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRG

Query:  RGRGRHY
        RGRGR+Y
Subjt:  RGRGRHY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19950.1 Domain of unknown function (DUF1767)2.3e-2342.08Show/hide
Query:  DQQESSSKSNRPSA-------------DSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLL--FKTSQRGC
        D  +++S++N P A             +S  ++G      ++      +S   +S   + +EK SSS+TRPK+V EAVP+QNQAA+Q LL   K S    
Subjt:  DQQESSSKSNRPSA-------------DSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLL--FKTSQRGC

Query:  RPFNSRNHRGKGR-------MEDQEVYTLEEYERRKSGTSQLPKET-SSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHG
        R +  R  RG+GR        ED  V+TL+E+E+R +G   LP     S T +DE+LA QLQN+FDLED + Q+      A DIRM+MF++ R T    G
Subjt:  RPFNSRNHRGKGR-------MEDQEVYTLEEYERRKSGTSQLPKET-SSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHG

Query:  GGRGRGGGRGR-RGRGRGRGR
         GRGRGGGRGR RGRG  RGR
Subjt:  GGRGRGGGRGR-RGRGRGRGR

AT5G19950.2 Domain of unknown function (DUF1767)2.3e-2342.08Show/hide
Query:  DQQESSSKSNRPSA-------------DSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLL--FKTSQRGC
        D  +++S++N P A             +S  ++G      ++      +S   +S   + +EK SSS+TRPK+V EAVP+QNQAA+Q LL   K S    
Subjt:  DQQESSSKSNRPSA-------------DSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLL--FKTSQRGC

Query:  RPFNSRNHRGKGR-------MEDQEVYTLEEYERRKSGTSQLPKET-SSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHG
        R +  R  RG+GR        ED  V+TL+E+E+R +G   LP     S T +DE+LA QLQN+FDLED + Q+      A DIRM+MF++ R T    G
Subjt:  RPFNSRNHRGKGR-------MEDQEVYTLEEYERRKSGTSQLPKET-SSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHG

Query:  GGRGRGGGRGR-RGRGRGRGR
         GRGRGGGRGR RGRG  RGR
Subjt:  GGRGRGGGRGR-RGRGRGRGR

AT5G19950.3 Domain of unknown function (DUF1767)1.5e-2241.63Show/hide
Query:  DQQESSSKSNRPSA-------------DSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLL--FKTSQRGC
        D  +++S++N P A             +S  ++G      ++      +S   +S   + +EK SSS+TRPK+V EAVP+QNQAA+Q LL   K S    
Subjt:  DQQESSSKSNRPSA-------------DSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLL--FKTSQRGC

Query:  RPFNSRNHRGKGR-------MEDQEVYTLEEYERRKSGTSQLPKET-SSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHG
        R +  R  RG+GR        ED  V+TL+E+E+R +G   LP     S T +DE+LA QLQN+FDLED +         A DIRM+MF++ R T    G
Subjt:  RPFNSRNHRGKGR-------MEDQEVYTLEEYERRKSGTSQLPKET-SSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHG

Query:  GGRGRGGGRGR-RGRGRGRGR
         GRGRGGGRGR RGRG  RGR
Subjt:  GGRGRGGGRGR-RGRGRGRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAGTAGTTACAGATCAACAGGAATCATCCTCAAAGAGCAATAGGCCTTCTGCTGATTCAGGAAATATTGAAGGTAAATTGACTATACAGCAACAAAGTGCAGA
CATGAAAGCTACCAATTCTGTCAATTCTGTTTCCCATTTAGAAAAGGCTGAAGAAAAACCAAGCAGCTCTGAAACAAGACCAAAGGAAGTTGCGGAAGCTGTTCCTGTCC
AAAATCAGGCTGCCTCTCAGAAGCTACTTTTCAAAACGAGTCAACGAGGTTGTAGGCCTTTCAACAGTAGAAACCACAGGGGAAAGGGCAGAATGGAAGATCAAGAGGTC
TATACTCTAGAAGAGTATGAAAGGAGAAAATCAGGGACAAGTCAATTACCAAAAGAGACATCTTCATATACAAATCAAGATGAAGAACTTGCACGGCAACTTCAAAATAA
ATTTGATTTGGAAGACTTTCATGTACAAGACAGTACAAGCAGAACAAACGCGGAAGATATAAGAATGAGCATGTTCAACTTTGAAAGGGATACGTATACACCACATGGTG
GTGGGAGAGGGAGGGGAGGAGGACGAGGGAGAAGAGGAAGAGGACGAGGAAGAGGAAGGCATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGAGTAGTTACAGATCAACAGGAATCATCCTCAAAGAGCAATAGGCCTTCTGCTGATTCAGGAAATATTGAAGGTAAATTGACTATACAGCAACAAAGTGCAGA
CATGAAAGCTACCAATTCTGTCAATTCTGTTTCCCATTTAGAAAAGGCTGAAGAAAAACCAAGCAGCTCTGAAACAAGACCAAAGGAAGTTGCGGAAGCTGTTCCTGTCC
AAAATCAGGCTGCCTCTCAGAAGCTACTTTTCAAAACGAGTCAACGAGGTTGTAGGCCTTTCAACAGTAGAAACCACAGGGGAAAGGGCAGAATGGAAGATCAAGAGGTC
TATACTCTAGAAGAGTATGAAAGGAGAAAATCAGGGACAAGTCAATTACCAAAAGAGACATCTTCATATACAAATCAAGATGAAGAACTTGCACGGCAACTTCAAAATAA
ATTTGATTTGGAAGACTTTCATGTACAAGACAGTACAAGCAGAACAAACGCGGAAGATATAAGAATGAGCATGTTCAACTTTGAAAGGGATACGTATACACCACATGGTG
GTGGGAGAGGGAGGGGAGGAGGACGAGGGAGAAGAGGAAGAGGACGAGGAAGAGGAAGGCATTATTGAAATGGTTATCTTCATTTTCCATTCAAATGTTTTATCAACAAT
TATGAATTTTTCATGTTTTATGCTTAGGTTTGGCTCAAACTTATTATGAGCATTTTGTTACCAAGTTCTTTGCTTAGGTTCAGTGAGTTGGTGTATAGCCATACTTTTAA
TTGAATTACACTGCTTGGACCCCTAACCATTGTTTTATGAACAGCCATTTTTGTTTTTGTAGATACCCAAATGAAAGCTTTTTTGGGTTGAGTGATGAGATCCAACTTTA
TTTGGAAAATGCAAAA
Protein sequenceShow/hide protein sequence
MKRVVTDQQESSSKSNRPSADSGNIEGKLTIQQQSADMKATNSVNSVSHLEKAEEKPSSSETRPKEVAEAVPVQNQAASQKLLFKTSQRGCRPFNSRNHRGKGRMEDQEV
YTLEEYERRKSGTSQLPKETSSYTNQDEELARQLQNKFDLEDFHVQDSTSRTNAEDIRMSMFNFERDTYTPHGGGRGRGGGRGRRGRGRGRGRHY