CuGenDBv2

Gene ID	CSPI01G19630
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Genome location	Chr1:15265050..15267938
RNA-Seq Expression	CSPI01G19630
Synteny	CSPI01G19630
Gene Ontology terms	GO:0006488 - dolichol-linked oligosaccharide biosynthetic process (biological process) GO:0007034 - vacuolar transport (biological process) GO:0015074 - DNA integration (biological process) GO:0005768 - endosome (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025132.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

67.65

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+PVNVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+K+DGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WIAKLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

KAA0049630.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

67.54

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+P+NVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+KKDGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WI KLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

KAA0049776.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

67.77

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+PVNVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+KKDGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WIAKLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

TYK15990.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

67.77

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+PVNVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+KKDGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WIAKLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

TYK23090.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

67.77

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+PVNVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+KKDGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WIAKLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIV7 Ty3/gypsy retrotransposon protein

0.0e+00

67.65

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+PVNVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+K+DGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WIAKLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

A0A5A7U2S1 Ty3/gypsy retrotransposon protein

0.0e+00

67.54

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+P+NVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+KKDGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WI KLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

A0A5A7U6J3 Ty3/gypsy retrotransposon protein

0.0e+00

67.77

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+PVNVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+KKDGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WIAKLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

A0A5D3CXB1 Ty3/gypsy retrotransposon protein

0.0e+00

67.77

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+PVNVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+KKDGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WIAKLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

A0A5D3DI73 Ty3/gypsy retrotransposon protein

0.0e+00

67.77

Show/hide

Query:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII
        GYL+EC+TLE      E  E   V   I  T        LN++ DVF+ P  LPP+R IEHHI++K GA+PVNVRP+RYA QQKEEME+LVDEML+SGII
Subjt:  GYLIECKTLEAHIAKIEPEESNNVPESILTT--------LNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGII

Query:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA
        RPSTSPYSSPVLLV+KKDGSWRFCVDYRALNN+T+P KFPIPVVEELFDELNGA++FSKIDLKAGYHQ+RM  +DIEKT FRTHEGHYEF+VMPFGLTNA
Subjt:  RPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNA

Query:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE
        P+TFQ+LMN +F+ +LR+FVLVFFDDIL+YS+ +EEH QH+E+VLE+LR  +L+AN  KC FAK   S              PEKIRA+K+WP P NVRE
Subjt:  PATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRS-------------RPEKIRAIKQWPTPTNVRE

Query:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR
        +RGFLGL GYYRRFVQ+YGSI+APLTQLLK G++KW    + AFEKL++AM TLP+LA+PDFN PFE+E+DASG+GVGAVL+Q+K+P+A++S  L+ RDR
Subjt:  VRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDR

Query:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV
        A+PVYERELMAVV A+QRWRPYLLGR F VKTDQRSLKFLLEQRVIQPQYQ+WIAKLLGYSFEV+YKPGLENKAADALSR+ PT HLNQLTAP L+D++V
Subjt:  AKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKV

Query:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR
        I +EV KD  L++I++ I+ +  E+ +YT  QGIL++KGRLV++K S+LIP IMHT HDSV GGH GFLRTYKR+ GEL+W GMK +V+KYCEEC+ CQ+
Subjt:  IGEEVDKDDYLKDIINRIQREE-EVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQR

Query:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE
        NK+ ALSPAGLL PLE+P+ +W DISMDFIEGLPKS G+EVI V+VD  SKYAHFL LKHP+ AK VAE+FVKE+VRLHGFP+SIVSDRDKIF+SHFW E
Subjt:  NKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKE

Query:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ
        +F+LAGTKLNRS++YHP Q D Q            RCFCGEK +DW +WL WAEYWYNTT+   +G++PFQAVYGR PPP+I QY   +      ++  Q
Subjt:  LFRLAGTKLNRSTAYHPRQMDRQ------------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQ

Query:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK
        L++R ++LG LKEHL  AQE+MKKF D KRR+VEF  GD+V+LK
Subjt:  LQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.0e-103

29.92

Show/hide

Query:  KELP-PRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFD
        ++LP P + +E  + +      + +R +     + + M   +++ L SGIIR S +  + PV+ V KK+G+ R  VDY+ LN    P  +P+P++E+L  
Subjt:  KELP-PRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFD

Query:  ELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLR
        ++ G+ +F+K+DLK+ YH +R+   D  K  FR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDIL++S++  EH +H++ VL+ L+
Subjt:  ELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLR

Query:  RHKLFANRKKCSF-------------AKRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLG-SFKWNGGAQEAFEKLQ
           L  N+ KC F              K      E I  + QW  P N +E+R FLG   Y R+F+     +  PL  LLK    +KW     +A E ++
Subjt:  RHKLFANRKKCSF-------------AKRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLG-SFKWNGGAQEAFEKLQ

Query:  RAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNK-----RPIAFYSHPLALRDRAKPVYERELMAVVLAIQRWRPYLLG--RTFIVKTDQRSL--KF
        + + + P+L   DF+    +ETDAS   VGAVL Q        P+ +YS  ++       V ++E++A++ +++ WR YL      F + TD R+L  + 
Subjt:  RAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNK-----RPIAFYSHPLALRDRAKPVYERELMAVVLAIQRWRPYLLG--RTFIVKTDQRSL--KF

Query:  LLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVH-------------LNQLTAPTLVDIKVIGEEVDKDDYLKDIINRIQREEEVKN
          E      +  +W   L  ++FE+ Y+PG  N  ADALSR+                  +NQ++       +V+ E  +    L  + N  +R EE  N
Subjt:  LLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVH-------------LNQLTAPTLVDIKVIGEEVDKDDYLKDIINRIQREEEVKN

Query:  YTLQQGIL-RYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDIS
          L+ G+L   K ++++  ++ L   I+   H+     H G       +     W G++ ++++Y + C TCQ NK+    P G L P+    R WE +S
Subjt:  YTLQQGIL-RYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDIS

Query:  MDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ
        MDFI  LP+S G+  +FV+VD FSK A  +       A+  A +F + ++   G P+ I++D D IF S  WK+        +  S  Y P+   Q +R 
Subjt:  MDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ

Query:  --------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKE----KQEKELQLQERGLILGILKEHLHAAQEKMK
                RC C      W+  +S  +  YN        ++PF+         I+H+YS   +  E      + +   QE   +   +KEHL+    KMK
Subjt:  --------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKE----KQEKELQLQERGLILGILKEHLHAAQEKMK

Query:  KFVDQKRREV-EFAEGDWVYLKFDLKGSL
        K+ D K +E+ EF  GD V +K    G L
Subjt:  KFVDQKRREV-EFAEGDWVYLKFDLKGSL

P0CT35 Transposon Tf2-2 polyprotein

1.0e-103

29.92

Show/hide

Query:  KELP-PRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFD
        ++LP P + +E  + +      + +R +     + + M   +++ L SGIIR S +  + PV+ V KK+G+ R  VDY+ LN    P  +P+P++E+L  
Subjt:  KELP-PRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFD

Query:  ELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLR
        ++ G+ +F+K+DLK+ YH +R+   D  K  FR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDIL++S++  EH +H++ VL+ L+
Subjt:  ELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLR

Query:  RHKLFANRKKCSF-------------AKRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLG-SFKWNGGAQEAFEKLQ
           L  N+ KC F              K      E I  + QW  P N +E+R FLG   Y R+F+     +  PL  LLK    +KW     +A E ++
Subjt:  RHKLFANRKKCSF-------------AKRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLG-SFKWNGGAQEAFEKLQ

Query:  RAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNK-----RPIAFYSHPLALRDRAKPVYERELMAVVLAIQRWRPYLLG--RTFIVKTDQRSL--KF
        + + + P+L   DF+    +ETDAS   VGAVL Q        P+ +YS  ++       V ++E++A++ +++ WR YL      F + TD R+L  + 
Subjt:  RAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNK-----RPIAFYSHPLALRDRAKPVYERELMAVVLAIQRWRPYLLG--RTFIVKTDQRSL--KF

Query:  LLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVH-------------LNQLTAPTLVDIKVIGEEVDKDDYLKDIINRIQREEEVKN
          E      +  +W   L  ++FE+ Y+PG  N  ADALSR+                  +NQ++       +V+ E  +    L  + N  +R EE  N
Subjt:  LLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVH-------------LNQLTAPTLVDIKVIGEEVDKDDYLKDIINRIQREEEVKN

Query:  YTLQQGIL-RYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDIS
          L+ G+L   K ++++  ++ L   I+   H+     H G       +     W G++ ++++Y + C TCQ NK+    P G L P+    R WE +S
Subjt:  YTLQQGIL-RYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDIS

Query:  MDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ
        MDFI  LP+S G+  +FV+VD FSK A  +       A+  A +F + ++   G P+ I++D D IF S  WK+        +  S  Y P+   Q +R 
Subjt:  MDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ

Query:  --------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKE----KQEKELQLQERGLILGILKEHLHAAQEKMK
                RC C      W+  +S  +  YN        ++PF+         I+H+YS   +  E      + +   QE   +   +KEHL+    KMK
Subjt:  --------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKE----KQEKELQLQERGLILGILKEHLHAAQEKMK

Query:  KFVDQKRREV-EFAEGDWVYLKFDLKGSL
        K+ D K +E+ EF  GD V +K    G L
Subjt:  KFVDQKRREV-EFAEGDWVYLKFDLKGSL

P0CT41 Transposon Tf2-12 polyprotein

1.0e-103

29.92

Show/hide

Query:  KELP-PRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFD
        ++LP P + +E  + +      + +R +     + + M   +++ L SGIIR S +  + PV+ V KK+G+ R  VDY+ LN    P  +P+P++E+L  
Subjt:  KELP-PRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFD

Query:  ELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLR
        ++ G+ +F+K+DLK+ YH +R+   D  K  FR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDIL++S++  EH +H++ VL+ L+
Subjt:  ELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLR

Query:  RHKLFANRKKCSF-------------AKRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLG-SFKWNGGAQEAFEKLQ
           L  N+ KC F              K      E I  + QW  P N +E+R FLG   Y R+F+     +  PL  LLK    +KW     +A E ++
Subjt:  RHKLFANRKKCSF-------------AKRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLG-SFKWNGGAQEAFEKLQ

Query:  RAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNK-----RPIAFYSHPLALRDRAKPVYERELMAVVLAIQRWRPYLLG--RTFIVKTDQRSL--KF
        + + + P+L   DF+    +ETDAS   VGAVL Q        P+ +YS  ++       V ++E++A++ +++ WR YL      F + TD R+L  + 
Subjt:  RAMTTLPILALPDFNAPFEVETDASGYGVGAVLMQNK-----RPIAFYSHPLALRDRAKPVYERELMAVVLAIQRWRPYLLG--RTFIVKTDQRSL--KF

Query:  LLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVH-------------LNQLTAPTLVDIKVIGEEVDKDDYLKDIINRIQREEEVKN
          E      +  +W   L  ++FE+ Y+PG  N  ADALSR+                  +NQ++       +V+ E  +    L  + N  +R EE  N
Subjt:  LLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTVH-------------LNQLTAPTLVDIKVIGEEVDKDDYLKDIINRIQREEEVKN

Query:  YTLQQGIL-RYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDIS
          L+ G+L   K ++++  ++ L   I+   H+     H G       +     W G++ ++++Y + C TCQ NK+    P G L P+    R WE +S
Subjt:  YTLQQGIL-RYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRTYKRLTGELFWVGMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDIS

Query:  MDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ
        MDFI  LP+S G+  +FV+VD FSK A  +       A+  A +F + ++   G P+ I++D D IF S  WK+        +  S  Y P+   Q +R 
Subjt:  MDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGFPQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ

Query:  --------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKE----KQEKELQLQERGLILGILKEHLHAAQEKMK
                RC C      W+  +S  +  YN        ++PF+         I+H+YS   +  E      + +   QE   +   +KEHL+    KMK
Subjt:  --------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKE----KQEKELQLQERGLILGILKEHLHAAQEKMK

Query:  KFVDQKRREV-EFAEGDWVYLKFDLKGSL
        K+ D K +E+ EF  GD V +K    G L
Subjt:  KFVDQKRREV-EFAEGDWVYLKFDLKGSL

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

4.7e-117

32.87

Show/hide

Query:  IAKIEPEESNNVPESILTTL-----NQYNDVFDWPKELPPRR------DIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSS
        I  +EP  +++  +    TL      +Y ++     +LPPR        ++H I IK GA    ++P+    + ++E+ K+V ++L +  I PS SP SS
Subjt:  IAKIEPEESNNVPESILTTL-----NQYNDVFDWPKELPPRR------DIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSS

Query:  PVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMN
        PV+LV KKDG++R CVDYR LN  TI   FP+P ++ L   +  A +F+ +DL +GYHQ+ M  +D  KT F T  G YE+ VMPFGL NAP+TF   M 
Subjt:  PVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMN

Query:  SIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFA-------------KRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNG
          FR    +FV V+ DDIL++S + EEH +H++ VLE L+   L   +KKC FA             ++      K  AI+ +PTP  V++ + FLG+  
Subjt:  SIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFA-------------KRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNG

Query:  YYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVL--MQNKRP----IAFYSHPLALRDRAKP
        YYRRF+ +   IA P+ QL      +W     +A EKL+ A+   P+L   +  A + + TDAS  G+GAVL  + NK      + ++S  L    +  P
Subjt:  YYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVL--MQNKRP----IAFYSHPLALRDRAKP

Query:  VYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTV-----------------H
          E EL+ ++ A+  +R  L G+ F ++TD  SL  L  +     + Q+W+  L  Y F + Y  G +N  ADA+SR   T+                  
Subjt:  VYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTV-----------------H

Query:  LNQLTAPTLVDIKVIGE-EVDKDDY--LKDIINRIQREEEV-KNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVL-GGHFGFLRTYKRLTGELFWV
         + L +  L+ +K + +  V  +D    +    +++  E   KNY+L+  ++ Y+ RLV+        A+M   HD  L GGHFG   T  +++   +W 
Subjt:  LNQLTAPTLVDIKVIGE-EVDKDDY--LKDIINRIQREEEV-KNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVL-GGHFGFLRTYKRLTGELFWV

Query:  GMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDISMDFIEGL-PKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGF
         ++  + +Y   C+ CQ  K+      GLL PL +    W DISMDF+ GL P S    +I V+VD FSK AHF+  +   DA  + +L  + I   HGF
Subjt:  GMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDISMDFIEGL-PKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGF

Query:  PQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ--------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPII
        P++I SDRD    +  ++EL +  G K   S+A HP+   Q +R         R +     ++W  +L   E+ YN+T  R LG SPF+   G  P    
Subjt:  PQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ--------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPII

Query:  HQYSRRKNRKEKQEKELQLQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLKFD
         +     N +     EL    + L +   KE L  AQ +M+   +Q+R+ +    GD V +  D
Subjt:  HQYSRRKNRKEKQEKELQLQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLKFD

Q99315 Transposon Ty3-G Gag-Pol polyprotein

8.1e-117

32.75

Show/hide

Query:  IAKIEPEESNNVPESILTTL-----NQYNDVFDWPKELPPRR------DIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSS
        I  +EP  +++  +    TL      +Y ++     +LPPR        ++H I IK GA    ++P+    + ++E+ K+V ++L +  I PS SP SS
Subjt:  IAKIEPEESNNVPESILTTL-----NQYNDVFDWPKELPPRR------DIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSS

Query:  PVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMN
        PV+LV KKDG++R CVDYR LN  TI   FP+P ++ L   +  A +F+ +DL +GYHQ+ M  +D  KT F T  G YE+ VMPFGL NAP+TF   M 
Subjt:  PVLLVKKKDGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMN

Query:  SIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFA-------------KRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNG
          FR    +FV V+ DDIL++S + EEH +H++ VLE L+   L   +KKC FA             ++      K  AI+ +PTP  V++ + FLG+  
Subjt:  SIFRSYLRKFVLVFFDDILVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFA-------------KRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNG

Query:  YYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVL--MQNKRP----IAFYSHPLALRDRAKP
        YYRRF+ +   IA P+ QL      +W     +A +KL+ A+   P+L   +  A + + TDAS  G+GAVL  + NK      + ++S  L    +  P
Subjt:  YYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRAMTTLPILALPDFNAPFEVETDASGYGVGAVL--MQNKRP----IAFYSHPLALRDRAKP

Query:  VYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTV-----------------H
          E EL+ ++ A+  +R  L G+ F ++TD  SL  L  +     + Q+W+  L  Y F + Y  G +N  ADA+SR   T+                  
Subjt:  VYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEVVYKPGLENKAADALSRVPPTV-----------------H

Query:  LNQLTAPTLVDIKVIGE-EVDKDDY--LKDIINRIQREEEV-KNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVL-GGHFGFLRTYKRLTGELFWV
         + L +  L+ +K + +  V  +D    +    +++  E   KNY+L+  ++ Y+ RLV+        A+M   HD  L GGHFG   T  +++   +W 
Subjt:  LNQLTAPTLVDIKVIGE-EVDKDDY--LKDIINRIQREEEV-KNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVL-GGHFGFLRTYKRLTGELFWV

Query:  GMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDISMDFIEGL-PKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGF
         ++  + +Y   C+ CQ  K+      GLL PL +    W DISMDF+ GL P S    +I V+VD FSK AHF+  +   DA  + +L  + I   HGF
Subjt:  GMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDISMDFIEGL-PKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGF

Query:  PQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ--------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPII
        P++I SDRD    +  ++EL +  G K   S+A HP+   Q +R         R +     ++W  +L   E+ YN+T  R LG SPF+   G  P    
Subjt:  PQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPR---QMDRQ--------RCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPII

Query:  HQYSRRKNRKEKQEKELQLQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLKFD
         +     N +     EL    + L +   KE L  AQ +M+   +Q+R+ +    GD V +  D
Subjt:  HQYSRRKNRKEKQEKELQLQERGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLKFD

Arabidopsis top hits

e value

%identity

Alignment

ATMG00850.1 DNA/RNA polymerases superfamily protein

7.7e-06

56.41

Show/hide

Query:  QKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKKDGSW
        ++  ++  + EML + II+PS SPYSSPVLLV+KKDG W
Subjt:  QKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKKDGSW

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.6e-27

46.51

Show/hide

Query:  HIELVLEVLRRHKLFANRKKCSFAKRS---------------RSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWN
        H+ +VL++  +H+ +ANRKKC+F +                  + P K+ A+  WP P N  E+RGFLGL GYYRRFV++YG I  PLT+LLK  S KW 
Subjt:  HIELVLEVLRRHKLFANRKKCSFAKRS---------------RSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWN

Query:  GGAQEAFEKLQRAMTTLPILALPDFNAPF
          A  AF+ L+ A+TTLP+LALPD   PF
Subjt:  GGAQEAFEKLQRAMTTLPILALPDFNAPF

Sequences

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CDS sequence

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ATGGGATACTTGATTGAGTGCAAAACCCTGGAAGCCCACATAGCCAAGATAGAACCAGAAGAGAGCAATAACGTACCTGAGAGCATACTGACAACCCTGAATCAGTATAA
TGATGTTTTCGATTGGCCCAAAGAATTGCCTCCAAGAAGGGATATCGAACATCATATACATATAAAGGGAGGGGCAGAACCGGTGAATGTCCGGCCCCATCGGTATGCGT
TTCAGCAGAAGGAAGAAATGGAAAAACTGGTGGACGAAATGCTAACTTCAGGAATTATCCGCCCCAGCACAAGCCCATACTCAAGCCCCGTACTATTGGTCAAAAAGAAG
GACGGAAGTTGGCGATTCTGCGTGGACTACAGGGCACTCAACAACATAACTATTCCATATAAGTTTCCTATCCCGGTTGTGGAAGAGCTGTTTGACGAGCTAAATGGTGC
AAATCTATTCTCTAAAATTGACTTGAAAGCAGGATATCATCAACTTAGAATGTGTAGTCAAGATATAGAGAAGACGACCTTTAGAACTCACGAAGGACATTATGAGTTTT
TGGTAATGCCGTTTGGACTCACAAACGCACCAGCAACGTTCCAATCACTAATGAACTCGATTTTTAGATCATATTTGAGGAAGTTCGTCTTGGTATTCTTTGACGATATA
CTGGTTTATAGTAGAAACTTAGAGGAACATTGCCAGCACATTGAGCTAGTTCTGGAAGTATTGAGGAGACATAAGCTGTTTGCTAATCGAAAGAAATGCAGTTTTGCGAA
AAGGAGTAGAAGTCGACCTGAAAAAATCAGAGCAATCAAACAATGGCCAACTCCAACAAATGTCCGGGAAGTTAGAGGGTTTCTGGGGTTGAATGGTTACTACCGCCGTT
TTGTACAGCACTATGGGTCCATAGCGGCACCTCTAACTCAACTACTAAAGTTGGGATCATTTAAATGGAATGGGGGAGCACAAGAAGCGTTTGAAAAGCTTCAACGAGCA
ATGACGACCCTGCCTATACTAGCTCTTCCAGATTTTAACGCACCATTCGAAGTAGAGACAGATGCGTCAGGCTATGGGGTAGGGGCAGTGCTAATGCAGAACAAGAGACC
AATTGCTTTTTATAGCCATCCACTAGCCTTGAGAGACCGAGCCAAACCAGTATACGAGAGGGAGTTAATGGCAGTAGTACTGGCAATCCAACGTTGGCGACCTTATTTGT
TGGGAAGAACCTTCATAGTTAAGACAGATCAGCGATCACTTAAGTTCCTGCTGGAACAGAGAGTCATACAACCGCAATATCAGAAGTGGATTGCAAAATTGTTGGGTTAT
TCATTTGAGGTGGTGTATAAACCGGGCTTGGAAAACAAGGCAGCAGATGCCCTTTCACGAGTACCACCAACTGTCCATCTTAACCAACTAACAGCCCCCACCTTGGTAGA
CATAAAGGTAATCGGAGAGGAGGTTGACAAGGATGACTACTTGAAAGATATAATCAACAGGATTCAAAGGGAGGAGGAGGTAAAGAATTACACTCTGCAACAAGGAATAC
TGAGATACAAAGGGAGATTAGTGATTGCGAAGAACTCTTCATTGATACCTGCCATTATGCACACAAATCATGACTCGGTCCTAGGAGGTCATTTCGGGTTCTTAAGAACG
TATAAGAGGCTGACAGGAGAGTTGTTTTGGGTAGGGATGAAAGCTGAAGTCAAAAAATATTGCGAAGAATGTATTACGTGCCAACGGAATAAGACTTTAGCATTGTCTCC
GGCAGGATTATTGACACCTCTAGAGGTACCAAATAGAGTATGGGAGGATATATCCATGGATTTTATTGAAGGACTGCCTAAATCAATGGGGTTTGAAGTAATATTCGTAC
TGGTGGACCACTTCAGTAAATATGCTCATTTCCTTGGCCTTAAACATCCTTTTGACGCTAAGATGGTAGCTGAATTGTTCGTTAAGGAGATTGTAAGACTGCATGGTTTT
CCACAGTCAATTGTCTCTGACCGAGACAAAATCTTTCTGAGTCATTTTTGGAAAGAACTGTTTCGTTTAGCTGGTACGAAGTTGAACCGAAGCACAGCATACCACCCCAG
ACAAATGGACAGACAGAGGTGCTTCTGTGGGGAAAAACAGAAAGATTGGCTGAAATGGTTGTCTTGGGCTGAATACTGGTATAATACTACATTCCAAAGATTTTTAGGCG
TGTCACCGTTCCAAGCTGTCTATGGAAGAACACCACCACCCATCATACATCAATACAGTAGGAGAAAGAATAGGAAAGAGAAGCAGGAGAAGGAGTTACAGTTGCAAGAA
AGGGGCTTAATTTTGGGTATTTTGAAAGAACATTTGCATGCAGCTCAAGAGAAGATGAAGAAGTTTGTTGATCAAAAGAGAAGGGAAGTTGAATTTGCAGAAGGTGATTG
GGTTTATTTGAAGTTCGATCTTAAAGGCAGTCTTCGGTGA

mRNA sequence

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Protein sequence

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MGYLIECKTLEAHIAKIEPEESNNVPESILTTLNQYNDVFDWPKELPPRRDIEHHIHIKGGAEPVNVRPHRYAFQQKEEMEKLVDEMLTSGIIRPSTSPYSSPVLLVKKK
DGSWRFCVDYRALNNITIPYKFPIPVVEELFDELNGANLFSKIDLKAGYHQLRMCSQDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDI
LVYSRNLEEHCQHIELVLEVLRRHKLFANRKKCSFAKRSRSRPEKIRAIKQWPTPTNVREVRGFLGLNGYYRRFVQHYGSIAAPLTQLLKLGSFKWNGGAQEAFEKLQRA
MTTLPILALPDFNAPFEVETDASGYGVGAVLMQNKRPIAFYSHPLALRDRAKPVYERELMAVVLAIQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGY
SFEVVYKPGLENKAADALSRVPPTVHLNQLTAPTLVDIKVIGEEVDKDDYLKDIINRIQREEEVKNYTLQQGILRYKGRLVIAKNSSLIPAIMHTNHDSVLGGHFGFLRT
YKRLTGELFWVGMKAEVKKYCEECITCQRNKTLALSPAGLLTPLEVPNRVWEDISMDFIEGLPKSMGFEVIFVLVDHFSKYAHFLGLKHPFDAKMVAELFVKEIVRLHGF
PQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPRQMDRQRCFCGEKQKDWLKWLSWAEYWYNTTFQRFLGVSPFQAVYGRTPPPIIHQYSRRKNRKEKQEKELQLQE
RGLILGILKEHLHAAQEKMKKFVDQKRREVEFAEGDWVYLKFDLKGSLR

CSPI01G19630 (gene) of Cucumber (PI 183967) v1 genome