; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G20160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G20160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZinc finger protein
Genome locationChr1:15898269..15898760
RNA-Seq ExpressionCSPI01G20160
SyntenyCSPI01G20160
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0060862 - negative regulation of floral organ abscission (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589714.1 Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.1e-2856.82Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN
        MEFK   HH  QQLNLEL+LEPSS     SSSAP+SPN EA   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R YR GD      H SN
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN

Query:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL
        N  M        S +LW VET+T+             +++G R  I   PAD +           DIGHLDLSLRL
Subjt:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL

XP_004146361.1 zinc finger protein 7 [Cucumis sativus]3.9e-8499.39Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN
        MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+RGYRSGDDHHEHHHNSN
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN

Query:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL
        NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL
Subjt:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL

XP_022921390.1 zinc finger protein 7 [Cucurbita moschata]3.0e-2856.82Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN
        MEFK   HH  QQLNLEL+LEPSS     SSSAP+SPN EA   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R YR GD      H SN
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN

Query:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL
        N  M        S +LW VET+T+ +           +++G R  I   PAD +           DIGHLDLSLRL
Subjt:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL

XP_022987492.1 zinc finger protein 7-like [Cucurbita maxima]5.1e-2856.82Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN
        MEFK   HH  QQLNLEL+LEPSS     SSSAP+SPN EA   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R YR GD      H SN
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN

Query:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL
        N  M        S +LW VET+T+             +++G R  I   PAD +           DIGHLDLSLRL
Subjt:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL

XP_038880343.1 zinc finger protein 3 [Benincasa hispida]1.3e-4269.41Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN
        MEFKRRH    QQLNLELLLEPSS    SSSSAP+SPN EA   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIR Y+   DH      +N
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN

Query:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPAD------DDHD-IGHLDLSLRL
        N    ++MNN SSHNLW+VET T++TT T    DHH LL G RG IPAD      DDHD IGHLDLSLRL
Subjt:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPAD------DDHD-IGHLDLSLRL

TrEMBL top hitse value%identityAlignment
A0A6J1BYT1 protein LATE FLOWERING7.7e-2252.05Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAP----ISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHH
        MEFK        QLNLEL+LEPSS S +SSS+       +PN +    ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRG     D     
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAP----ISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHH

Query:  HNSNNNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGR----RGIIPADDDHDIGHLDLSLRL
          S N +M MMMNN  S++LW +ET   +         H    +GR    R   P + D     LDLSLRL
Subjt:  HNSNNNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGR----RGIIPADDDHDIGHLDLSLRL

A0A6J1E5I0 zinc finger protein 71.5e-2856.82Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN
        MEFK   HH  QQLNLEL+LEPSS     SSSAP+SPN EA   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R YR GD      H SN
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN

Query:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL
        N  M        S +LW VET+T+ +           +++G R  I   PAD +           DIGHLDLSLRL
Subjt:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL

A0A6J1JAI3 zinc finger protein 7-like2.5e-2856.82Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN
        MEFK   HH  QQLNLEL+LEPSS     SSSAP+SPN EA   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R YR GD      H SN
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN

Query:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL
        N  M        S +LW VET+T+             +++G R  I   PAD +           DIGHLDLSLRL
Subjt:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGII---PADDD----------HDIGHLDLSLRL

A0A6J1KNT5 zinc finger protein 2-like4.8e-2453.71Show/hide
Query:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN
        MEFK   HH   QLNL L LEPSSSSS SS SAP+SP  E     RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKK+REIR YR      +H  N  
Subjt:  MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSN

Query:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGR--RGIIPADDDH----------DIGHLDLSLRL
         NS           +LW VETIT+   A  +    H +  GR  RG   A++ H          DIGHLDLSLRL
Subjt:  NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGR--RGIIPADDDH----------DIGHLDLSLRL

M1BM51 Zinc finger protein6.8e-1845.45Show/hide
Query:  ELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNN--SMMMMMNNYSSH
        +LLL+ SSSSS+SS  +P+ P        RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+     G      +HN NNN  S+     +++ H
Subjt:  ELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNN--SMMMMMNNYSSH

Query:  N-----LWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL
              + N + I+       ++  +  + NG   +       D GHLDLSLRL
Subjt:  N-----LWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 24.1e-2073.33Show/hide
Query:  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI
        ++  QLNLEL+LEPSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI

Q39262 Zinc finger protein 33.6e-0836.97Show/hide
Query:  KRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHH------EHHH
        +R  H+   +LNL   ++ ++S  N S+++            ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + +    S   H         H 
Subjt:  KRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHH------EHHH

Query:  NSNNNSMMMMMNNYSSHNL
          NN+  + +  +  SH L
Subjt:  NSNNNSMMMMMNNYSSHNL

Q39263 Zinc finger protein 42.4e-1260.61Show/hide
Query:  NLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS
        +L L L  +S SSN        P+    V  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++
Subjt:  NLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS

Q39266 Zinc finger protein 75.0e-1035.57Show/hide
Query:  QQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNSMMMMMN
        +   ++L+L L  + +    S+    +P        RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  + G   G  HH   +   ++S+ M  +
Subjt:  QQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNSMMMMMN

Query:  NYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLD
        +   H+       T S     ++  HHQ   G    +P   D+D G  D
Subjt:  NYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLD

Q42485 Zinc finger protein 13.1e-1249.43Show/hide
Query:  RRHHHQQQQLNLELLLEPSSSSS----------NSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR
        ++  HQ  +L L LL   +++SS          +SSS++      E +   RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  RRHHHQQQQLNLELLLEPSSSSS----------NSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 73.6e-1135.57Show/hide
Query:  QQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNSMMMMMN
        +   ++L+L L  + +    S+    +P        RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  + G   G  HH   +   ++S+ M  +
Subjt:  QQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNSMMMMMN

Query:  NYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLD
        +   H+       T S     ++  HHQ   G    +P   D+D G  D
Subjt:  NYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLD

AT1G66140.1 zinc finger protein 41.7e-1360.61Show/hide
Query:  NLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS
        +L L L  +S SSN        P+    V  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++
Subjt:  NLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS

AT1G80730.1 zinc-finger protein 12.2e-1349.43Show/hide
Query:  RRHHHQQQQLNLELLLEPSSSSS----------NSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR
        ++  HQ  +L L LL   +++SS          +SSS++      E +   RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  RRHHHQQQQLNLELLLEPSSSSS----------NSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR

AT5G25160.1 zinc finger protein 32.6e-0936.97Show/hide
Query:  KRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHH------EHHH
        +R  H+   +LNL   ++ ++S  N S+++            ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + +    S   H         H 
Subjt:  KRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHH------EHHH

Query:  NSNNNSMMMMMNNYSSHNL
          NN+  + +  +  SH L
Subjt:  NSNNNSMMMMMNNYSSHNL

AT5G57520.1 zinc finger protein 22.9e-2173.33Show/hide
Query:  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI
        ++  QLNLEL+LEPSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTAAACGCCGCCATCATCATCAACAGCAACAACTTAACCTTGAGCTTCTTCTTGAACCTTCTTCTTCTTCTTCTAACTCTTCTTCATCTGCTCCTATTAGTCC
AAATTTTGAGGCAGTTGTTGGTGCTAGAGTTTTCTCATGCAATTATTGCAAGAGGAAATTTTATAGCTCTCAAGCTTTGGGAGGTCACCAAAATGCTCATAAACTGGAGA
GAACTTTGGCCAAGAAAAGCAGAGAAATTAGAGGTTACAGATCAGGAGATGATCATCATGAACATCATCATAATAGTAATAATAATAGTATGATGATGATGATGAATAAT
TATTCAAGCCATAATTTATGGAATGTTGAGACAATTACATCATCAACAACAGCAACAACAATAGCTGATGATCATCATCAATTACTCAATGGAAGACGTGGTATTATTCC
AGCTGATGATGATCATGATATTGGCCATCTTGATTTGTCTTTAAGGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTAAACGCCGCCATCATCATCAACAGCAACAACTTAACCTTGAGCTTCTTCTTGAACCTTCTTCTTCTTCTTCTAACTCTTCTTCATCTGCTCCTATTAGTCC
AAATTTTGAGGCAGTTGTTGGTGCTAGAGTTTTCTCATGCAATTATTGCAAGAGGAAATTTTATAGCTCTCAAGCTTTGGGAGGTCACCAAAATGCTCATAAACTGGAGA
GAACTTTGGCCAAGAAAAGCAGAGAAATTAGAGGTTACAGATCAGGAGATGATCATCATGAACATCATCATAATAGTAATAATAATAGTATGATGATGATGATGAATAAT
TATTCAAGCCATAATTTATGGAATGTTGAGACAATTACATCATCAACAACAGCAACAACAATAGCTGATGATCATCATCAATTACTCAATGGAAGACGTGGTATTATTCC
AGCTGATGATGATCATGATATTGGCCATCTTGATTTGTCTTTAAGGCTCTGA
Protein sequenceShow/hide protein sequence
MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNSMMMMMNN
YSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL