; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G20300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G20300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionOxysterol-binding protein-related protein 4B-like
Genome locationChr1:15994142..15994794
RNA-Seq ExpressionCSPI01G20300
SyntenyCSPI01G20300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058273.1 oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa]7.9e-7290.6Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ--PKPKPKKNPCPLDLNNKNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVR VQNKQSLFVLFGPWRKQ  PKPKPKKNPCPLDLN  NERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ--PKPKPKKNPCPLDLNNKNERLRF

Query:  DSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
        DSCGSQCELMAESSCK +S+P G SSG WRLGCGPWRINPIKIGMGRRV
Subjt:  DSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV

XP_004146363.1 uncharacterized protein LOC101210202 [Cucumis sativus]4.3e-9499.42Show/hide
Query:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQP
        MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQ LFVLFGPWRKQP
Subjt:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQP

Query:  KPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
        KPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
Subjt:  KPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV

XP_023007086.1 uncharacterized protein LOC111499680 [Cucurbita maxima]7.2e-4159.44Show/hide
Query:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ
        MK+EK+  E FVL LDN PSR SS+  SSR +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQSLF+LF PWRKQ
Subjt:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ

Query:  PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV
           K KK+ C  D   ++ R RF SCGSQCE + +S C+ KS+        PA  SS H RLGCGPWRINP++I +GRRV
Subjt:  PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV

XP_023530969.1 uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]1.5e-4159.67Show/hide
Query:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ
        MK+EK+  E FVLPLDN PSR SS+  SSR +YYRRTTEGVPFQWEMQPGTPK+  P TE +   I+PPPA LSL   KP R  Q KQSLF+LF PWRKQ
Subjt:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ

Query:  PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA---------PAGGSSGHWRLGCGPWRINPIKIGMGRRV
           K KK+ C  D   ++ R RF SCGSQCE + +S C+ KS+         PA  SS H RLGCGPWRINP++I +GRRV
Subjt:  PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA---------PAGGSSGHWRLGCGPWRINPIKIGMGRRV

XP_038878338.1 uncharacterized protein LOC120070597 [Benincasa hispida]4.4e-6282.31Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERLRFDS
        MSRSSRFYYRRTTEGVPFQWEMQPGTPKN PPLT+V+ PPISPPPA+LSL LSKP RAVQNKQ LFVLFGPW KQ   KPKKNPCPLD NN  ERLRFDS
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERLRFDS

Query:  CGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
        CGS CE M ESSCK KS  A  SSGHWR+GCGPWRINPIKI  GRRV
Subjt:  CGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV

TrEMBL top hitse value%identityAlignment
A0A0A0LUL8 Uncharacterized protein2.1e-9499.42Show/hide
Query:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQP
        MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQ LFVLFGPWRKQP
Subjt:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQP

Query:  KPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
        KPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
Subjt:  KPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV

A0A2N9IW61 Uncharacterized protein9.3e-1840.88Show/hide
Query:  SRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAV----QNKQSLFVLFGPWRKQPKPKPKKN-----PCP
        SRNSS+  SSR YY R  EGVPF WEMQPG  K  PP  EVI PPISPPPAVLSLGL KP   V    Q +++       W K  K K  KN      C 
Subjt:  SRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAV----QNKQSLFVLFGPWRKQPKPKPKKN-----PCP

Query:  LDLNNKNERL-RFDSCGSQCELMAESSCKGKSA-------------------PAGGSSGHWRLGCGPWRINPIKIGMGRRV
           ++ +++  RF+ C S CE MA S     S+                     G  S H  L C PW I+ I + + RR+
Subjt:  LDLNNKNERL-RFDSCGSQCELMAESSCKGKSA-------------------PAGGSSGHWRLGCGPWRINPIKIGMGRRV

A0A5D3CJV8 Oxysterol-binding protein-related protein 4B-like3.8e-7290.6Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ--PKPKPKKNPCPLDLNNKNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVR VQNKQSLFVLFGPWRKQ  PKPKPKKNPCPLDLN  NERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ--PKPKPKKNPCPLDLNNKNERLRF

Query:  DSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
        DSCGSQCELMAESSCK +S+P G SSG WRLGCGPWRINPIKIGMGRRV
Subjt:  DSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV

A0A6J1EQV3 uncharacterized protein LOC1114366862.3e-4058.89Show/hide
Query:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ
        MK+EK+  E FVL LDN PSR SS+  SSR +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQSLF+LF PWRKQ
Subjt:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ

Query:  PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV
           K +K+ C  D    + R RF SCGSQCE + +S C+ KS+        PA  SS H RLGCGPWRINP++I +GRRV
Subjt:  PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV

A0A6J1KZJ1 uncharacterized protein LOC1114996803.5e-4159.44Show/hide
Query:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ
        MK+EK+  E FVL LDN PSR SS+  SSR +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQSLF+LF PWRKQ
Subjt:  MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQ

Query:  PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV
           K KK+ C  D   ++ R RF SCGSQCE + +S C+ KS+        PA  SS H RLGCGPWRINP++I +GRRV
Subjt:  PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40475.1 unknown protein1.2e-0441.1Show/hide
Query:  NSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLS---KPVRAVQNKQSLFV
        +S ++ SSR YY      VPF WE +PGTPK+      + LPP++PPP+  S   S   K  +A   KQ+ FV
Subjt:  NSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLS---KPVRAVQNKQSLFV

AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)2.6e-1252.94Show/hide
Query:  SSMSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQS
        SS+SR+S   +Y  R  EGVPF+WEMQPGTP N  P    ++PP+SPPPA+LSLGL KP  +++  ++
Subjt:  SSMSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQS

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B2.6e-1252.94Show/hide
Query:  SSMSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQS
        SS+SR+S   +Y  R  EGVPF+WEMQPGTP N  P    ++PP+SPPPA+LSLGL KP  +++  ++
Subjt:  SSMSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQS

AT5G01790.1 unknown protein9.8e-0437.33Show/hide
Query:  EKNSNELFVLPLDNFPSRNSSMSRSSR----FYYRRTTEGVPFQWEMQPGTPKNNPPLTEV-ILPPISPPPAVLS
        +K     F   L +   R SS+S +      +YY      VPF+WE  PGTPK+  P +E+  LPP++PPP+  S
Subjt:  EKNSNELFVLPLDNFPSRNSSMSRSSR----FYYRRTTEGVPFQWEMQPGTPKNNPPLTEV-ILPPISPPPAVLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGGAAAAGAATAGTAATGAATTATTTGTTCTTCCTTTGGATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACTAC
TGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCACTCACGGAGGTGATTCTGCCGCCGATCAGCCCTCCCCCGGCGGTGCTCAGCC
TTGGTTTATCGAAGCCGGTGAGGGCTGTTCAGAATAAACAATCATTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGAAGAATCCCTGTCCG
TTGGATCTTAATAATAAGAACGAACGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCTGAATCTTCATGCAAAGGAAAATCTGCACCGGCGGGGGGATC
TTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGGTATGGGAAGACGAGTTTAG
mRNA sequenceShow/hide mRNA sequence
TTCCCCTAATTAATCCCATATTAATCCCCCCCATTTCACTCTCTCCTTAATCCCACTTTTCAAAACCTTCCCGGCCACTATCACAAACCCCATATAAAAGATTTGCATGA
ATTTTACTTTTCAAAAATTGGGAAACTATGAAGGAGGAAAAGAATAGTAATGAATTATTTGTTCTTCCTTTGGATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTC
CTCTAGATTCTACTATAGAAGAACTACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCACTCACGGAGGTGATTCTGCCGCCGA
TCAGCCCTCCCCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGCTGTTCAGAATAAACAATCATTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAG
CCCAAGCCCAAGAAGAATCCCTGTCCGTTGGATCTTAATAATAAGAACGAACGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCTGAATCTTCATGCAA
AGGAAAATCTGCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGGTATGGGAAGACGAGTTTAG
Protein sequenceShow/hide protein sequence
MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQSLFVLFGPWRKQPKPKPKKNPCP
LDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV