; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G20320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G20320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReplication protein A 32 kDa subunit B-like
Genome locationChr1:16000840..16004578
RNA-Seq ExpressionCSPI01G20320
SyntenyCSPI01G20320
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453602.1 PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo]7.8e-15498.92Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTP+K YQAPIAN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

XP_011656845.1 replication protein A 32 kDa subunit B [Cucumis sativus]1.9e-155100Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

XP_022988280.1 replication protein A 32 kDa subunit B [Cucurbita maxima]1.6e-14693.14Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMT QPQM NLSNTP++ YQ P++N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

XP_023516911.1 replication protein A 32 kDa subunit B-like isoform X1 [Cucurbita pepo subsp. pepo]2.1e-14693.14Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMT QPQM NLSNTP++ YQ PI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

XP_038880298.1 replication protein A 32 kDa subunit B [Benincasa hispida]1.1e-14795.67Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG ID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQ SS+ TQPQM NLSNTPMK YQAP++N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGD WKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

TrEMBL top hitse value%identityAlignment
A0A1S4DZE3 replication protein A 32 kDa subunit B-like3.8e-15498.92Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTP+K YQAPIAN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

A0A5D3CIS3 Replication protein A 32 kDa subunit B-like3.8e-15498.92Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTP+K YQAPIAN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

A0A6J1E235 replication protein A 32 kDa subunit B-like isoform X23.6e-14492.42Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG+ID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLR QQSSSMT QPQM NLSNTP++ YQ PI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ L VPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

A0A6J1E347 replication protein A 32 kDa subunit B-like isoform X13.8e-14692.78Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG+ID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMT QPQM NLSNTP++ YQ PI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ L VPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

A0A6J1JJ51 replication protein A 32 kDa subunit B7.7e-14793.14Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMT QPQM NLSNTP++ YQ P++N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIAN

Query:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYTGQAGGD WK+LEQMVLDFLQLPSCD+ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

SwissProt top hitse value%identityAlignment
Q5RC43 Replication protein A 32 kDa subunit2.3e-2330.34Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNR-------DVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD
        M+ S F+   + S GG      TQ+P    SPA ++         Q ++P T+ Q+  A L  +    F I  V+++ V +VG++R+     T++ + +D
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNR-------DVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD

Query:  DGTGR-IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMK
        D T   +D  +WV+    S+E   +    YV+V GHL+SFQ K++L  F I P+ D NE T H +E I  H   ++   Q S+                 
Subjt:  DGTGR-IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMK

Query:  VYQAPIAN---QYTGQAGGDSWKSLEQMVLDFLQ----LPSCDSERGAHRDVIAQQLK-VPLEKLIPAMKNLEEEGLIYSTTDDFHFKST
          +API+N      G  GG+S+     + +   Q    + +C    G +   +  QLK + +  +  AM  L  EG IYST DD HFKST
Subjt:  VYQAPIAN---QYTGQAGGDSWKSLEQMVLDFLQ----LPSCDSERGAHRDVIAQQLK-VPLEKLIPAMKNLEEEGLIYSTTDDFHFKST

Q6H7J5 Replication protein A 32 kDa subunit B3.4e-5138.57Show/hide
Query:  GNAA--FSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDC
        GNA+  F GGGFMPSQ T A + +        K+R+ QALLPLTVKQI DA  ++DDKSNF ++G++V+ V+LVG + N+  R+TDV+F LDDGTGR+  
Subjt:  GNAA--FSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDC

Query:  SKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIANQ
        ++W N++ D+ E+  I +G YV V+G LK FQGKR +  +S+R +T++N++T+HF+  ++VH   TR + Q +++  T      +    M   Q+P+ NQ
Subjt:  SKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIANQ

Query:  ---YTGQAGGDSWKSLEQMVLDFLQLPS-CDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG
           ++      +  ++  +VL+    P+  + + G   D ++++L +P E +   + +  + G +Y+T DD H+KST NG
Subjt:  ---YTGQAGGDSWKSLEQMVLDFLQLPS-CDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG

Q6K9U2 Replication protein A 32 kDa subunit A1.5e-4339.43Show/hide
Query:  AFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDA---FLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNE
        AFS   F  SQ   A   S +P+K+R   + +PLTVKQI++A    ++ +  + FV+DGV+  NV+LVG+V  +  R TDV+F +DDGTGR+D  +WVN+
Subjt:  AFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDA---FLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNE

Query:  AADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR---------KQQSSSMTTQPQMTNLSNTPMKVYQAPI
         ADS E   + +GMYV V G LK  Q ++    F+IRPVTDYNE+T HFI+ + +H  NT+ +            SSS     +MT  + T +K   AP+
Subjt:  AADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR---------KQQSSSMTTQPQMTNLSNTPMKVYQAPI

Query:  ANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTAN
         +   G     S   L   VL+  + P + +SE G H D I ++ ++P  K+  A+  L + G IYST D+ H+KS  N
Subjt:  ANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTAN

Q8LFJ8 Replication protein A 32 kDa subunit B4.3e-7050.36Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY   FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMTTQPQMT-NLSNTPMKVYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI +HF E +YVH YNT+LR       + T +PQM  +   TP K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMTTQPQMT-NLSNTPMKVYQAP

Query:  IANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTAN
         +NQ+  Q   DS   ++Q VL++L  P    SE G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  IANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTAN

Q9ZQ19 Replication protein A 32 kDa subunit A2.6e-6748.18Show/hide
Query:  ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDC
        +SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC
Subjt:  ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDC

Query:  SKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NLSNTPMKVYQAPIA
         +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T     T    SNT       P+ 
Subjt:  SKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NLSNTPMKVYQAPIA

Query:  NQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFK
        +       G+  K+L+ M+LD+L+ P+C + ++G H D IAQQLK+P  KL   +++LE +GLIYST D++HFK
Subjt:  NQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A21.8e-6848.18Show/hide
Query:  ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDC
        +SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC
Subjt:  ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDC

Query:  SKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NLSNTPMKVYQAPIA
         +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T     T    SNT       P+ 
Subjt:  SKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NLSNTPMKVYQAPIA

Query:  NQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFK
        +       G+  K+L+ M+LD+L+ P+C + ++G H D IAQQLK+P  KL   +++LE +GLIYST D++HFK
Subjt:  NQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFK

AT2G24490.2 replicon protein A21.8e-6848.18Show/hide
Query:  ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDC
        +SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC
Subjt:  ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDC

Query:  SKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NLSNTPMKVYQAPIA
         +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T     T    SNT       P+ 
Subjt:  SKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMT--NLSNTPMKVYQAPIA

Query:  NQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFK
        +       G+  K+L+ M+LD+L+ P+C + ++G H D IAQQLK+P  KL   +++LE +GLIYST D++HFK
Subjt:  NQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFK

AT3G02920.1 Replication protein A, subunit RPA323.0e-7150.36Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY   FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Subjt:  MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMTTQPQMT-NLSNTPMKVYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI +HF E +YVH YNT+LR       + T +PQM  +   TP K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMTTQPQMT-NLSNTPMKVYQAP

Query:  IANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTAN
         +NQ+  Q   DS   ++Q VL++L  P    SE G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  IANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTAN

AT3G02920.2 Replication protein A, subunit RPA325.4e-6847.67Show/hide
Query:  MYASQFDGNAAFSGGGFMPSQ-TTQAPDHSF-------------------SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRN
        MY   FDGNAAF+GGGFMPSQ TTQA + S                    S  +NRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +  
Subjt:  MYASQFDGNAAFSGGGFMPSQ-TTQAPDHSF-------------------SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRN

Query:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMT
           RIT V F +DDGTG +DC +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI +HF E +YVH YNT+LR       + T
Subjt:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMT

Query:  TQPQMT-NLSNTPMKVYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTAN
         +PQM  +   TP K YQ   +NQ+  Q   DS   ++Q VL++L  P    SE G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  TQPQMT-NLSNTPMKVYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCAAGTCAATTCGACGGCAACGCTGCTTTCTCCGGTGGTGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATCATTCATTTTCTCCGGCCAAAAATCGGGA
TGTCCAGGCATTGCTTCCATTAACAGTGAAACAGATAAACGACGCATTTCTGTCTAGTGATGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAACAATGTTAAGC
TTGTAGGGATGGTGCGCAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCGTTAGACGATGGCACTGGGCGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCAGAT
TCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTCCGGGTCCATGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTTTAAATGTCTTTTCTATCAGGCCGGTGAC
AGACTATAATGAGATCACAAATCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTGCGGAAACAACAAAGTAGTAGTATGACTACTCAGCCACAGATGA
CAAATCTATCTAATACGCCCATGAAAGTATATCAAGCTCCCATTGCAAATCAATACACTGGTCAAGCAGGCGGTGATAGTTGGAAGAGCCTTGAGCAGATGGTCTTAGAT
TTTTTGCAACTTCCTTCATGCGATTCTGAAAGGGGCGCACACCGTGATGTCATTGCTCAACAGCTCAAAGTTCCACTAGAGAAGCTCATTCCGGCGATGAAAAATCTAGA
AGAGGAAGGCCTAATTTACTCAACAACTGATGATTTCCACTTCAAATCAACCGCCAACGGTTGA
mRNA sequenceShow/hide mRNA sequence
GGTGAAGTGGGATTTCTAGGTTTTACCAAAACAAAATTTCATTTCTCAAACTGCTCTTCAAACTGTTCTTCATCACTCACTTTTATTCTCTTGTAGGGTTCCCATATTCT
TCACTCCTAGCGTTACAGAGGAAGAACGATGTATGCAAGTCAATTCGACGGCAACGCTGCTTTCTCCGGTGGTGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATC
ATTCATTTTCTCCGGCCAAAAATCGGGATGTCCAGGCATTGCTTCCATTAACAGTGAAACAGATAAACGACGCATTTCTGTCTAGTGATGATAAATCAAATTTTGTTATT
GATGGTGTTGATGTTAACAATGTTAAGCTTGTAGGGATGGTGCGCAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCGTTAGACGATGGCACTGGGCGGATTGACTG
TAGCAAATGGGTCAATGAAGCTGCAGATTCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTCCGGGTCCATGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTT
TAAATGTCTTTTCTATCAGGCCGGTGACAGACTATAATGAGATCACAAATCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTGCGGAAACAACAAAGT
AGTAGTATGACTACTCAGCCACAGATGACAAATCTATCTAATACGCCCATGAAAGTATATCAAGCTCCCATTGCAAATCAATACACTGGTCAAGCAGGCGGTGATAGTTG
GAAGAGCCTTGAGCAGATGGTCTTAGATTTTTTGCAACTTCCTTCATGCGATTCTGAAAGGGGCGCACACCGTGATGTCATTGCTCAACAGCTCAAAGTTCCACTAGAGA
AGCTCATTCCGGCGATGAAAAATCTAGAAGAGGAAGGCCTAATTTACTCAACAACTGATGATTTCCACTTCAAATCAACCGCCAACGGTTGACATTTTTGTTATGGTAAC
TAAACGAATTAAAGGGAAGTTTTTTTCCTGCCGTTGTTTCGTTTCATCTATAGTTTAAGTTGGGTAAATCACTATGGCTATAGTTTAAGTTGGGTAAATCACTATGGTCA
AAATATGATCCTGAAACATCTGTTTTAGCCTTTATAACAGCGATCCAAAATCCCACATGGCTATGCCTTGTTTATAGTTGATGCAATTATTGTGATGTTTGTTTGTATTG
TTCAACATATTTAAAGTGTGCTAATACAGCACAGAGTGCCAGCAGCCTGGAGAGGTGGATTTGGCTGCCTCCAGGACTTCTTTCCAATCCGCAA
Protein sequenceShow/hide protein sequence
MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAAD
SNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPMKVYQAPIANQYTGQAGGDSWKSLEQMVLD
FLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG