; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G20360 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G20360
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionU4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
Genome locationChr1:16042084..16044769
RNA-Seq ExpressionCSPI01G20360
SyntenyCSPI01G20360
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589703.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-9088.89Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDRRRDRED     RDRDRERRR++DDRD ERERGR KRS TP+R RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL

Query:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDR  RRRHRSPSPDH RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKD+VGGGE VEEAMADEDE+EMMKKLGIPVGFDSTKGKPV G
Subjt:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

XP_004146322.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus]2.7e-107100Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR

Query:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD
        TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD
Subjt:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD

Query:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
Subjt:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

XP_008453595.1 PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo]9.0e-10396.98Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD DDRDRERERGRSKRS TPDRSRSRRSRTRSPDRHRSRSLSR
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR

Query:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD
        TPEDR SRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDN G GEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPGAD
Subjt:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD

Query:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        VSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

XP_023007065.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita maxima]4.8e-8885.9Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD+DDRDRERERGRSKRS TPDR RSR  RSRTRSPD+HR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL

Query:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDR  RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

XP_023530476.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo]4.8e-8885.9Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD++DRDRERERGRSKRS TPDR RSR  RSRTRSPDRHR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL

Query:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDR  RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

TrEMBL top hitse value%identityAlignment
A0A0A0LU61 SNRNP27 domain-containing protein1.3e-107100Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR

Query:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD
        TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD
Subjt:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD

Query:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
Subjt:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

A0A1S3BW27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein4.4e-10396.98Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD DDRDRERERGRSKRS TPDRSRSRRSRTRSPDRHRSRSLSR
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR

Query:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD
        TPEDR SRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDN G GEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPGAD
Subjt:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD

Query:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        VSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

A0A5D3CK71 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein4.4e-10396.98Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD DDRDRERERGRSKRS TPDRSRSRRSRTRSPDRHRSRSLSR
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSR

Query:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD
        TPEDR SRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDN G GEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPGAD
Subjt:  TPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGAD

Query:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        VSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  VSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

A0A6J1C0K3 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein6.8e-8885.71Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRE                RDRERRRD+DDRDRERERGRSKRS TPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL

Query:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNV----GGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGK
        SRTPEDR  RRRHR+PSP+HARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQK NKD      GGGEVVEEAMADEDE+EMMKKLGIPVGFDSTKGK
Subjt:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNV----GGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGK

Query:  PVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        PV GADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
Subjt:  PVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

A0A6J1L1Y6 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like2.3e-8885.9Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD+DDRDRERERGRSKRS TPDR RSR  RSRTRSPD+HR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSL

Query:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDR  RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR

SwissProt top hitse value%identityAlignment
Q6DDA4 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein2.8e-0638.74Show/hide
Query:  RRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQ
        R R R     RER R R   R+++ R RER R R +          RRSR+RSP R RSR          S RRHRS S    R + RRD   DD+K+ +
Subjt:  RRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQ

Query:  KAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        ++       IA E  + K                  E+E+EMMK +G    FD++KGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  KAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q6DH74 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.1e-0541.09Show/hide
Query:  RERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRR
        R R R    R+RRR R         RDRERRR      RERER RS+     DR R RRSR+RSP R RSR          S RRHRS S    R++ RR
Subjt:  RERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRR

Query:  DLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNR
        D    D KE+   V      I+ E  + K                  E+E+EMMK +G    F+++KGK   G+     V V  KR+ RQYMNR+GGFNR
Subjt:  DLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNR

Query:  PL
        PL
Subjt:  PL

Q6GLZ8 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein7.4e-0738.58Show/hide
Query:  RRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQ
        R R R     RER R R   R+++ R RER R R +          RRSR+RSP R RSR          S RRHRS S   +R + RRD   DD+KE  
Subjt:  RRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQ

Query:  KAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMAD------EDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
                            K++ GGG    +  A+      E+E+EMMK +G    FDS+KGK   G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  KAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMAD------EDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein4.6e-0941.54Show/hide
Query:  RERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDE
        R R R   RE R  R   RDRERRR +  R RER+R              RRSR+RSP R RSR          S RRHRS SP  +R + RR    D+E
Subjt:  RERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDE

Query:  KERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        K+  K +        K + +Q   +D  G           E+E+EMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  KERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q8WVK2 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein3.9e-0841.03Show/hide
Query:  RERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDE
        R R R   RE R  R   R+RERRR +  R RER+R              RRSR+RSP R RSR          S RRHRS SP  +R + RR    D+E
Subjt:  RERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDE

Query:  KERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        K+  K          K + +Q   +D  G           E+E+EMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  KERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Arabidopsis top hitse value%identityAlignment
AT5G57370.1 unknown protein2.7e-3655.95Show/hide
Query:  DRDRYKDRERDRDHR-ERDRRRDREDRDHRERDRDRERRRDQDDRDRERERG---RSKRSLTPDRSRSRRSRTRSPDRHRSRSLS---RTPEDRPSRRRH
        +RDR ++RERD+D   +RDRRR R+DRD R+RDRDRER     DR+R+R+RG   +  RS TPD   +R    RSP+R+RSRS S       DR    R 
Subjt:  DRDRYKDRERDRDHR-ERDRRRDREDRDHRERDRDRERRRDQDDRDRERERG---RSKRSLTPDRSRSRRSRTRSPDRHRSRSLS---RTPEDRPSRRRH

Query:  RSPSPDHARKRHRRDLTADDEKE--RQKAVSDFVD----GIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGADVSGVR
        RSPSPD   ++  R  + DDEKE  R++ V+D VD     I K++ KQ ++  + GGGE  +E   D +E+EMMK LGIP GFDSTKGKPV GADVSG+R
Subjt:  RSPSPDHARKRHRRDLTADDEKE--RQKAVSDFVD----GIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGADVSGVR

Query:  VVTKRQPRQYMNRRGGFNRPLPAERSR
         VTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  VVTKRQPRQYMNRRGGFNRPLPAERSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGACCGTGAACGAGACAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCATCGGGAACGTGACCG
GCGTAGGGATCGAGAAGATCGTGACCACCGTGAACGTGATCGGGACCGGGAACGCCGTAGGGATCAGGACGATCGTGACCGTGAAAGGGAGCGTGGCCGGAGTAAAAGGT
CACTCACTCCCGACCGCTCAAGATCCCGCCGCTCCCGCACCCGCTCGCCGGACCGGCACCGGTCGCGGTCTCTTTCTCGTACTCCCGAGGACCGGCCATCTCGCCGCCGC
CATCGTTCTCCTTCCCCGGATCATGCTCGGAAGCGTCATCGCCGGGATTTGACTGCGGATGACGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTTGTTGATGGCATTGC
GAAAGAGCAGCACAAGCAGAAGAATAATAAAGACAACGTTGGTGGCGGAGAAGTAGTGGAGGAGGCCATGGCTGATGAAGATGAAATGGAGATGATGAAGAAATTAGGTA
TTCCCGTGGGTTTCGATTCGACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGCGTTAGGGTAGTTACCAAGAGGCAGCCTAGGCAGTACATGAATCGTCGTGGA
GGGTTCAACAGGCCGTTGCCGGCCGAGCGCAGCCGGTAG
mRNA sequenceShow/hide mRNA sequence
CACTCTGAGCTTACGGAATCGGAAATTCTTACAAATCCGCTATGGTCGACCGTGAACGAGACAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGATAC
AAAGACCGGGAGCGAGACCGTGACCATCGGGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCACCGTGAACGTGATCGGGACCGGGAACGCCGTAGGGATCAGGA
CGATCGTGACCGTGAAAGGGAGCGTGGCCGGAGTAAAAGGTCACTCACTCCCGACCGCTCAAGATCCCGCCGCTCCCGCACCCGCTCGCCGGACCGGCACCGGTCGCGGT
CTCTTTCTCGTACTCCCGAGGACCGGCCATCTCGCCGCCGCCATCGTTCTCCTTCCCCGGATCATGCTCGGAAGCGTCATCGCCGGGATTTGACTGCGGATGACGAAAAG
GAGCGGCAGAAAGCAGTTTCTGACTTTGTTGATGGCATTGCGAAAGAGCAGCACAAGCAGAAGAATAATAAAGACAACGTTGGTGGCGGAGAAGTAGTGGAGGAGGCCAT
GGCTGATGAAGATGAAATGGAGATGATGAAGAAATTAGGTATTCCCGTGGGTTTCGATTCGACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGCGTTAGGGTAG
TTACCAAGAGGCAGCCTAGGCAGTACATGAATCGTCGTGGAGGGTTCAACAGGCCGTTGCCGGCCGAGCGCAGCCGGTAGCTAATATATTTGGCTAGGTCACTGAGTGTA
GCAACCAAGACTGACATTCTTCCTGAGATATCATTGAGCGGTGGGAGATAAATGCAGACCAGGCTATTGCAATGTGCTCGAGCATATTCTGGATTTTGGTTTGCTTGACT
TTGCTGGAGAGGCCAGATGGAAGTCTTTGGGCACAGTATTGTTTGTATGTAATATATATTCATGAAACCTTAGAATTCGAGTCGAGTTGAGTTAATTGATACTCGAAGAA
CGAGGGATATTTTTGGCTATTGTAGAAATTGGAGAATTTTCTATGTTGCTTATTTGTTTTCAGTAAAAAATGGATAGTGCTTAGATCAATTGAATTGGATTTGGTTCCTC
CAAACTTGAGATTAGAGCTTTTCACAAAGGCCCGCTAACGTGCGAACACAGAAAATTTACAATCAGTTACACCAAGCAATTGCCATCACTGCTGCGAAAGCCATGCAATG
CAAAAGCCGTTATAAAGCCA
Protein sequenceShow/hide protein sequence
MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRR
HRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRG
GFNRPLPAERSR