; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G20520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G20520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCadherin-4 like
Genome locationChr1:16197000..16200016
RNA-Seq ExpressionCSPI01G20520
SyntenyCSPI01G20520
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058224.1 uncharacterized protein E6C27_scaffold274G005480 [Cucumis melo var. makuwa]1.1e-8498.17Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIE+DLESSS+GADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPT
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDV+TPT
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPT

XP_004146333.1 uncharacterized protein LOC101223203 [Cucumis sativus]7.0e-92100Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED

XP_008453565.1 PREDICTED: uncharacterized protein LOC103494240 [Cucumis melo]6.6e-9097.7Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIE+DLESSS+GADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDV+TPTSKDNSN PED
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED

XP_022932487.1 uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata]3.1e-7985.08Show/hide
Query:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFIS+K Q     LS+LIPSSF LGHRNRSTRSGKVKFIE+DLESSS+GADSE+LAIRKLDDFVQ+IIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPED
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCLDFFAKESISG TRL PVD+ELETSN  ELEI+VKTPTS DNSN PED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPED

XP_038880607.1 uncharacterized protein LOC120072253 [Benincasa hispida]7.3e-8188.4Show/hide
Query:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFISSKFQ     LS+LIPSSF LGHRNRSTRSGKVKFIE+DLESSS+ ADSE+LAIRKLDDFVQRIIVERSTP+WLPFVPGSSFWVPPRR
Subjt:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPED
        NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKES SG TRLAPVDTELETSN  ELEI+VKTPTS DNSN PED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPED

TrEMBL top hitse value%identityAlignment
A0A0A0LZW6 Uncharacterized protein3.4e-92100Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED

A0A1S3BXC7 uncharacterized protein LOC1034942403.2e-9097.7Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIE+DLESSS+GADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDV+TPTSKDNSN PED
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED

A0A5D3DYD5 Uncharacterized protein5.3e-8598.17Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIE+DLESSS+GADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPT
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDV+TPT
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPT

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X11.5e-7985.08Show/hide
Query:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFIS+K Q     LS+LIPSSF LGHRNRSTRSGKVKFIE+DLESSS+GADSE+LAIRKLDDFVQ+IIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPED
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCLDFFAKESISG TRL PVD+ELETSN  ELEI+VKTPTS DNSN PED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPED

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X13.3e-7985.08Show/hide
Query:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFIS+K Q     LS+LIPSSF LGHRNRSTRSGKVKFIE+DLESSS+GADSE+LAIRKLDDFVQ+IIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPED
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCLDFFAKESISG TRL PVD ELETSN  ELEI+VKTPTS DNSN PED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.2 unknown protein7.6e-2040.43Show/hide
Query:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR
        MAR FS S S    +F    S L+PSS  +  R++S+ R G +   E+D  ++S      +  I+KL+D V RI V R+ PDWLPFVPG+S+WVPP    
Subjt:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKES
        ++   +  L  KL  P+  E+S S  ++ GWP  D+F K S
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKES

AT1G16840.3 unknown protein1.0e-1935.75Show/hide
Query:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR
        MAR FS S S    +F    S L+PSS  +  R++S+ R G +   E+D  ++S      +  I+KL+D V RI V R+ PDWLPFVPG+S+WVPP    
Subjt:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
        ++   +  L  KL  P+  E+S S  ++ GWP  D+F K           V  +L       ++ KT T+ ++ +H ED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED

AT1G16840.4 unknown protein1.0e-1935.75Show/hide
Query:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR
        MAR FS S S    +F    S L+PSS  +  R++S+ R G +   E+D  ++S      +  I+KL+D V RI V R+ PDWLPFVPG+S+WVPP    
Subjt:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
        ++   +  L  KL  P+  E+S S  ++ GWP  D+F K           V  +L       ++ KT T+ ++ +H ED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED

AT1G78890.1 unknown protein1.1e-2343.57Show/hide
Query:  MARVFSLSQSFISSKF-QLSVLIPSSFTLGHR----NRSTRSGKVKFI-EVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPR
        MAR  S S S    +F   S+L+PSS T+  R    NR + S  +  I E+D+ +           + KL+D V RI+V RS PDWLPFVPG+SFWVPP 
Subjt:  MARVFSLSQSFISSKF-QLSVLIPSSFTLGHR----NRSTRSGKVKFI-EVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPR

Query:  RNKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAK
        R++   +  L +KL  PI+ E+S S+++ RGWPC D+F K
Subjt:  RNKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAK

AT2G19180.1 unknown protein6.2e-2239.26Show/hide
Query:  IEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKE---SISG
        IE++++S +   ++E   ++KL++FV+RIIV  STPDWLPF PGSSFWVPP +    ++ +L DK+  P+ +E+S SL++  GWPC  FF      S S 
Subjt:  IEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKE---SISG

Query:  PTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED
            A V+ ++  +  LE+ +        S  PED
Subjt:  PTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGGGTTTTTTCTCTCTCCCAGTCTTTCATTTCCTCCAAGTTTCAATTATCGGTTTTGATTCCGTCTTCCTTTACTCTCGGTCATCGGAACCGCTCTACACGGTC
CGGCAAGGTCAAATTCATCGAAGTTGACCTCGAATCGTCCTCTTACGGGGCTGATTCAGAGATTCTTGCTATTAGGAAGCTCGACGACTTTGTACAAAGGATTATTGTTG
AGCGATCCACACCTGATTGGCTTCCCTTTGTGCCCGGTTCGTCTTTTTGGGTTCCTCCACGCCGTAATAAACCACGCAGGGTTGTCGACCTATTCGATAAATTGGTTGAA
CCGATCGCTAAAGAGGATTCCCCTTCCCTTGCCAACGCCCGTGGTTGGCCCTGCTTAGATTTTTTCGCCAAAGAATCTATCTCTGGACCAACTCGATTGGCTCCAGTAGA
TACTGAGTTGGAAACCTCAAACGAGTTGGAGATTGACGTGAAGACACCAACAAGTAAAGATAACTCAAATCACCCTGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ACCAACTTTGTATTATATAAATATAAATCGCACAGTGAAGAAAATTATATCATTTTTTCCAAATTTACTCATCCTCGAATCTGAAGTTCGTTCTCTTTCTCACACCCATA
GCTAAAGAGATAAAGAGACTTCATTCATCTGCTGTTCTTCGATTTATAGAGCTCAAAATTCATCTGCTGTTCTTCGCATGGCCCGGGTTTTTTCTCTCTCCCAGTCTTTC
ATTTCCTCCAAGTTTCAATTATCGGTTTTGATTCCGTCTTCCTTTACTCTCGGTCATCGGAACCGCTCTACACGGTCCGGCAAGGTCAAATTCATCGAAGTTGACCTCGA
ATCGTCCTCTTACGGGGCTGATTCAGAGATTCTTGCTATTAGGAAGCTCGACGACTTTGTACAAAGGATTATTGTTGAGCGATCCACACCTGATTGGCTTCCCTTTGTGC
CCGGTTCGTCTTTTTGGGTTCCTCCACGCCGTAATAAACCACGCAGGGTTGTCGACCTATTCGATAAATTGGTTGAACCGATCGCTAAAGAGGATTCCCCTTCCCTTGCC
AACGCCCGTGGTTGGCCCTGCTTAGATTTTTTCGCCAAAGAATCTATCTCTGGACCAACTCGATTGGCTCCAGTAGATACTGAGTTGGAAACCTCAAACGAGTTGGAGAT
TGACGTGAAGACACCAACAAGTAAAGATAACTCAAATCACCCTGAAGATTGAGAAAGAAGAACCTCATACCTCATCCACTAACGGAGTTGGGAACGTTAGATGGCTGTCA
GAGATTTGAGAGACCAAACGGGGTGGAAAGTGATGGGGACGAGAAGTCGGAGAGAAATAGGGTGCTCTACAGACGGTTCCATTTTGGTTGCTGTGGTATTCACTTCCATT
TGCTTCGCCTAAACTGTTCTGTCTACTTGAAGCCCACTCTGCACCCCTTCCCCCAAACTAATGGTTGTTTATGCTTCGTTGTTCTTGGACGAAATTCACCAGCTTGTTAT
TTAAATGAGGTGAATTATCAAGTTATCAACCCCTGTTCTATCCAATCTATGCACAGCTACAATAAAAGAAATCTCCCTTGTGTATGTATAAAGTAACTGATAAATGTTTT
CCATTTCTAGTGGTTGAAGATCAATCTAAGCTCGTAGTTGCAATATTTTCTCCGACTGTTTGGAACTTTTGTGCTATTGGTATAGCAAGTTCTCTTTTATGGGTTCATTA
TGTGTTGTTAGAACATTGATGATCTGCTTCTTGTTTATATATATATATAGATCATATATATATACATACATATACACAACATATATATCTATATATACCAAACGGGGTGG
AGTTTTTTTTACCCACTGTCGAATGCCC
Protein sequenceShow/hide protein sequence
MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVE
PIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVKTPTSKDNSNHPED