CuGenDBv2

Gene ID	CSPI01G20540
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Fiber protein Fb15
Genome location	Chr1:16209001..16212312
RNA-Seq Expression	CSPI01G20540
Synteny	CSPI01G20540
Gene Ontology terms	GO:0009299 - mRNA transcription (biological process) GO:0009416 - response to light stimulus (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN65836.2 hypothetical protein Csa_019715 [Cucumis sativus]

1.6e-42

98.89

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAV+RSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_004146334.1 uncharacterized protein LOC101202935 [Cucumis sativus]

1.6e-42

98.89

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAV+RSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_008453564.1 PREDICTED: uncharacterized protein LOC103494239 [Cucumis melo]

2.2e-41

96.67

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKK VQRSLDNY+AKYIQTSSIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_023515839.1 uncharacterized protein LOC111779885 [Cucurbita pepo subsp. pepo]

2.1e-39

91.11

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QF+SEIKGLKVKELPAYVKPMLS+D  KKAVQR LDNYNAKYIQTSSIDPLLHVCFGGMI SYL+ALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_038879762.1 uncharacterized protein LOC120071511 [Benincasa hispida]

1.1e-40

94.44

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELPAYVKPMLSID+AKKAVQR LDNYNAKYIQT SIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXD4 Uncharacterized protein

7.5e-43

98.89

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAV+RSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A1S3BWJ6 uncharacterized protein LOC103494239

1.1e-41

96.67

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKK VQRSLDNY+AKYIQTSSIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A5D3DYB3 Uncharacterized protein

1.1e-41

96.67

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKK VQRSLDNY+AKYIQTSSIDPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1F109 uncharacterized protein LOC111441149

5.0e-39

88.89

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEI+GLKVKELP YVKPML+ID+ KKAVQR LDNYNAKYIQTSSIDPLLHVC+GGMI SYL+ALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1IH01 uncharacterized protein LOC111472849

2.3e-39

91.11

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEI+GLKVKELP YVKPMLSID AKKAVQR LDNYNAKYIQT SIDPLLHVC+GGMI SYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30010.1 unknown protein

3.1e-33

68.89

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Query:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MA+++ +SEI+G KV ELP Y+K   S++  K +V+R LDNYN KYIQTSS+DP+LH+CF GM FSYLVALP ERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

Sequences

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CDS sequence

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ATGGCAATGAAGCAATTCTTCTCCGAAATCAAGGGCTTGAAAGTTAAGGAGCTGCCTGCCTATGTGAAACCGATGCTCTCCATTGATGCTGCCAAGAAGGCTGTGCAGAG
AAGTCTCGACAATTACAACGCCAAGTACATTCAAACTAGTTCAATTGATCCTCTCCTTCATGTCTGCTTTGGTGGTATGATCTTTTCGTACCTCGTTGCGCTTCCTGAGG
AACGACGCCACCTTGAACATCAGCAACACGCCAAAGAACATGGCGGCCATTGA

mRNA sequence

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AAAATCCAAAGCGTCCAATCAGCAAAATAGGGCCAAAGGAATGGACGGGCACGATTAGACTGCCATTTCTCCCTGCAAAAACTCCTTTTTTGATCTCGATCTTGTATTTC
AGGGCTAGGGTTTGAGTTTTGGGCAAATTATTCAGAGATGGCAATGAAGCAATTCTTCTCCGAAATCAAGGGCTTGAAAGTTAAGGAGCTGCCTGCCTATGTGAAACCGA
TGCTCTCCATTGATGCTGCCAAGAAGGCTGTGCAGAGAAGTCTCGACAATTACAACGCCAAGTACATTCAAACTAGTTCAATTGATCCTCTCCTTCATGTCTGCTTTGGT
GGTATGATCTTTTCGTACCTCGTTGCGCTTCCTGAGGAACGACGCCACCTTGAACATCAGCAACACGCCAAAGAACATGGCGGCCATTGATTGAGTTCTTTATATTTTGA
GGGTGAAGGTGCCTCAAAGATGTTTCTGGTCAATAATTTGTTTCCCGAATGTTTTTGTATCTTAGTCTTACTGGCTGAAACTTGCAATTCTTTTCTTTTATACATGGTGC
CAGAGGAAATAAACGTACTTTTCTGTGATTTCTAATCATATATTGGCAACCATTCTTGAGTCGCAGCACATGTTCATGGCTGATTTCTTTACTTTATTGCACATTATCCT
TCCCCATACTTGTTTCTCTAGTTAGTTCTTTGCCAATGGCCTATAATACTATTGCTGCAGACTTTAGATGCAAATTGATTCTTTCATTTCCTCAAGTCGTTAGTAGTAAT
CTCTAGGATTACAGTGATGAATTTAATTTGAATACTCACTAGTTTTTTGTGATAAAAAGGATGTTGGAGTGATTCTAAATATAACAAAAGTGATTTTTACCGTT

Protein sequence

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MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVQRSLDNYNAKYIQTSSIDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

CSPI01G20540 (gene) of Cucumber (PI 183967) v1 genome