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CSPI01G20780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G20780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionClavata3/ESR (CLE) gene family member
Genome locationChr1:16401078..16401638
RNA-Seq ExpressionCSPI01G20780
SyntenyCSPI01G20780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058189.1 Clavata3/ESR (CLE) protein [Cucumis melo var. makuwa]2.0e-4790.99Show/hide
Query:  MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKK-MMMIDNNNGTNFEEKR
        MSGAMGLSKSSIL+FWLSVLVVCVTSVAGARK LFL HNGVRDNKNSLTTT  ETTINRCKYSKNN  NDLHCCECFFLSSKK MMMI+NNNGTNFE+KR
Subjt:  MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKK-MMMIDNNNGTNFEEKR

Query:  VVPTGPNPLHN
        VVPTGPNPLHN
Subjt:  VVPTGPNPLHN

KAG6587715.1 hypothetical protein SDJN03_16280, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1656.6Show/hide
Query:  MGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRVVPTG
        M L++SSIL+  LSV  VC+ SV GARK LFL  +  RDN NSL  T+A  +  RCK  K      L+CCECFF SS+KM+   NN  ++ EEKRVVPTG
Subjt:  MGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRVVPTG

Query:  PNPLHN
        PNPLHN
Subjt:  PNPLHN

KGN65507.1 hypothetical protein Csa_019832 [Cucumis sativus]2.0e-55100Show/hide
Query:  MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV
        MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV
Subjt:  MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV

Query:  VPTGPNPLHN
        VPTGPNPLHN
Subjt:  VPTGPNPLHN

XP_023003872.1 putative receptor-like protein kinase At4g00960 [Cucurbita maxima]1.7e-0648.91Show/hide
Query:  KSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV
        +SSIL+  LSV  VC+ SV GARK LFL  +  RDN NSL  T+A     RCK  K      L+CC CFF SS+K +   NN  ++ EEKR+
Subjt:  KSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV

TrEMBL top hitse value%identityAlignment
A0A0A0LXI1 Uncharacterized protein9.5e-56100Show/hide
Query:  MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV
        MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV
Subjt:  MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV

Query:  VPTGPNPLHN
        VPTGPNPLHN
Subjt:  VPTGPNPLHN

A0A2P5AD37 Uncharacterized protein8.4e-0434.88Show/hide
Query:  VAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSS--KKMMMIDNNNGTNFEEKRVVPTGPNPLHN
        +   R    +D+NG R   ++ TT   +  ++ C+ S    V  LH C  +F +S  K       +N ++ E+KRVVPTG NPLHN
Subjt:  VAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSS--KKMMMIDNNNGTNFEEKRVVPTGPNPLHN

A0A2P5BBD9 Uncharacterized protein6.4e-0434.88Show/hide
Query:  VAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSS--KKMMMIDNNNGTNFEEKRVVPTGPNPLHN
        +   R    +D+NG R   ++ TT   +  ++ C+ S    V  LH C  +F +S  K       +N ++ E+KRVVPTG NPLHN
Subjt:  VAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSS--KKMMMIDNNNGTNFEEKRVVPTGPNPLHN

A0A5A7UXE2 Clavata3/ESR (CLE) gene family member9.5e-4890.99Show/hide
Query:  MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKK-MMMIDNNNGTNFEEKR
        MSGAMGLSKSSIL+FWLSVLVVCVTSVAGARK LFL HNGVRDNKNSLTTT  ETTINRCKYSKNN  NDLHCCECFFLSSKK MMMI+NNNGTNFE+KR
Subjt:  MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKK-MMMIDNNNGTNFEEKR

Query:  VVPTGPNPLHN
        VVPTGPNPLHN
Subjt:  VVPTGPNPLHN

A0A6J1KNU3 putative receptor-like protein kinase At4g009608.1e-0748.91Show/hide
Query:  KSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV
        +SSIL+  LSV  VC+ SV GARK LFL  +  RDN NSL  T+A     RCK  K      L+CC CFF SS+K +   NN  ++ EEKR+
Subjt:  KSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTATTGTTTTGGCTTTCGGTTTTAGTTGTTTGTGTTACCTCCGTTGCGGGTGCTCGGAAGACGTTGTTTTTGGA
TCACAACGGTGTTAGAGACAACAAAAACAGCTTGACAACTACACTGGCAGAGACGACAATCAACAGGTGCAAGTACTCGAAGAACAACGACGTTAACGACCTCCATTGTT
GTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGATGATGATCGATAATAATAATGGCACCAACTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAAT
TAA
mRNA sequenceShow/hide mRNA sequence
TTTTAAAACTATAAATCTCATATATCATCTTTTTTTATTTTGTGGGTCTTCACCCTTTCACATGATCATCATCATTTCCAAATCATCAATTTTTCCCTTTCTTCAAAATG
AGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTATTGTTTTGGCTTTCGGTTTTAGTTGTTTGTGTTACCTCCGTTGCGGGTGCTCGGAAGACGTTGTTTTTGGATCA
CAACGGTGTTAGAGACAACAAAAACAGCTTGACAACTACACTGGCAGAGACGACAATCAACAGGTGCAAGTACTCGAAGAACAACGACGTTAACGACCTCCATTGTTGTG
AGTGCTTCTTCTTGAGCTCTAAGAAGATGATGATGATCGATAATAATAATGGCACCAACTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATTAA
GTAGAGAGGAAAAAGAACAAGTGATCAAGATCAAGATCAAAGTCAATAATATATAATATTATAGTTTATGCTGATCTTGATTATTATCATGCATGATTATGATATATATA
TATATATATAT
Protein sequenceShow/hide protein sequence
MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRVVPTGPNPLHN