; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G20940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G20940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA polymerase epsilon subunit
Genome locationChr1:16513589..16514830
RNA-Seq ExpressionCSPI01G20940
SyntenyCSPI01G20940
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0006536 - glutamate metabolic process (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0051781 - positive regulation of cell division (biological process)
GO:0008622 - epsilon DNA polymerase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004351 - glutamate decarboxylase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0070182 - DNA polymerase binding (molecular function)
InterPro domainsIPR016266 - DNA polymerase epsilon, subunit B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036041.1 DNA polymerase epsilon subunit 2 [Cucumis melo var. makuwa]7.9e-10488.69Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSPIL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        DI KFRYDPIKKIF  HT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSSAISFTGNFYDV
        TASVEINLS+AISFTGNFYD+
Subjt:  TASVEINLSSAISFTGNFYDV

TYJ98844.1 DNA polymerase epsilon subunit 2 [Cucumis melo var. makuwa]1.8e-10389.09Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSPIL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        DI KFRYDPIKKIF  HT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSSAISFTGNFYD
        TASVEINLS+AISFTGNFYD
Subjt:  TASVEINLSSAISFTGNFYD

XP_011657177.1 DNA polymerase epsilon subunit B [Cucumis sativus]4.2e-11398.16Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLT
        DIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLT
Subjt:  DIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLT

Query:  ASVEINLSSAISFTGNF
        ASVEINLSSA   TG F
Subjt:  ASVEINLSSAISFTGNF

XP_016899382.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo]1.7e-9887.16Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSPIL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        DI KFRYDPIKKIF  HT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSSAISFTGNF
        TASVEINLS+A   TG F
Subjt:  TASVEINLSSAISFTGNF

XP_038894268.1 DNA polymerase epsilon subunit B [Benincasa hispida]2.2e-10189.45Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HG ED+AI+ VLDNLH+ESLKS ILDKDAVHRV+SIM+AAD+VGEESPNTITSTSALCII+AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        DI KFRYDPIKKIF LHT  LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSSAISFTGNF
        TASVEINLS+A   TG F
Subjt:  TASVEINLSSAISFTGNF

TrEMBL top hitse value%identityAlignment
A0A0A0LUV9 Uncharacterized protein3.1e-122100Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLT
        DIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLT
Subjt:  DIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLT

Query:  ASVEINLSSAISFTGNFYDVEKSELV
        ASVEINLSSAISFTGNFYDVEKSELV
Subjt:  ASVEINLSSAISFTGNFYDVEKSELV

A0A1S4DTQ5 DNA polymerase epsilon subunit8.3e-9987.16Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSPIL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        DI KFRYDPIKKIF  HT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSSAISFTGNF
        TASVEINLS+A   TG F
Subjt:  TASVEINLSSAISFTGNF

A0A5A7T342 Glutamate decarboxylase3.8e-10488.69Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSPIL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        DI KFRYDPIKKIF  HT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSSAISFTGNFYDV
        TASVEINLS+AISFTGNFYD+
Subjt:  TASVEINLSSAISFTGNFYDV

A0A5D3BIF9 Glutamate decarboxylase8.6e-10489.09Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSPIL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        DI KFRYDPIKKIF  HT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSSAISFTGNFYD
        TASVEINLS+AISFTGNFYD
Subjt:  TASVEINLSSAISFTGNFYD

A0A6J1KGF0 DNA polymerase epsilon subunit5.8e-9282.11Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF SR  G ED+AI+ VLD+LH+ESL+S I+DKDAVHRV+SI++AAD+ GEE P+T TSTSALCII+AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        DI K+RYDPIKKIF +HT +LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  DIPKFRYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSSAISFTGNF
        TASVEINLSSA   TG F
Subjt:  TASVEINLSSAISFTGNF

SwissProt top hitse value%identityAlignment
A7YWS7 DNA polymerase epsilon subunit 22.9e-1630Show/hide
Query:  LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK
        LR +     K+RGL  ++ EA+  +   +   +  E ++A+E ++D + ++ L S ++++  V    ++   +  V E      T      II AFDIP+
Subjt:  LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK

Query:  FRYDPIKKIFLH--TENLP---IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY
        F Y+  +K FL     N P   + G A  KA L+R+R+ +L QR  R + F+ P         GS  ++  I++L+G T   G   V+G+I+Q+++G F+
Subjt:  FRYDPIKKIFLH--TENLP---IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY

Query:  LEDLTASVEINLSSAISFTG
        LED T +++++LS A   +G
Subjt:  LEDLTASVEINLSSAISFTG

O54956 DNA polymerase epsilon subunit 27.2e-1529.09Show/hide
Query:  LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK
        LR +     K+RGL  ++ EA   +   +      E +E +  ++D + ++ L S ++++  V        A  +  +    TI       II AFDIP+
Subjt:  LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK

Query:  FRYDPIKKIFLHTENL-----PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY
        F Y+  +K FL           + G A  KA LY +R+ +L QR  R + F+ P     +   GS  ++  I++L+G T   G   V+G+I+Q+++G F+
Subjt:  FRYDPIKKIFLHTENL-----PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY

Query:  LEDLTASVEINLSSAISFTG
        LED T +V+++LS A   +G
Subjt:  LEDLTASVEINLSSAISFTG

Q500V9 DNA polymerase epsilon subunit B4.9e-5657.75Show/hide
Query:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFED-EAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKF
        RKK+Q+K K RG Y++K +ALDEI+ F  +    +D EAI+ +LDNL +E+ KS  +D ++V  +I+ ++ A    EE     TS S+L II+AF +PKF
Subjt:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFED-EAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKF

Query:  RYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE
         YD +KK F  HT +LPIHG+ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMGVISQ+EDGHFYLEDL+ASVE
Subjt:  RYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE

Query:  INLSSAISFTGNF
        I+LS A   TG F
Subjt:  INLSSAISFTGNF

Q54Y85 DNA polymerase epsilon subunit 21.6e-2232.85Show/hide
Query:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDK-DAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKF
        +K++ +   + G +SIK +A+  I++ + ++ G++   I  ++DNL +   KS  L   +   ++I  + ++D + +E         AL +I+AF+ P F
Subjt:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDK-DAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKF

Query:  RYDPIKKIFLHTENL--PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASV
         +D   K F+ +EN    +HG +++K+ LYR R+L + QR  R+ +FS P             I+P+ SL+G TGRK V+G ISQ+E+  FY+EDL  +V
Subjt:  RYDPIKKIFLHTENL--PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASV

Query:  EINLSSA
        +I++S A
Subjt:  EINLSSA

Q5ZKQ6 DNA polymerase epsilon subunit 27.2e-1528.63Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF
        M+   LR+++    ++RGL  ++ EA+  +   +       +E  E V+D + +   K P+     +  + ++  A  +  +    TI   +   II AF
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAF

Query:  DIPKFRYDPIKKIF--LHTENLPI---HGDASAKAALYRDRFLLLSQRLSRDQHFSKPAF----DIGMSHFGSCEISPIQSLVGQTGR---KWVMGVISQ
        DIP++ Y+P +K F  L   NLP+    G A  KA L+R+R+ +L QR  R + F+  A     D   S F   ++  +++L+G T +     V+G+I+Q
Subjt:  DIPKFRYDPIKKIF--LHTENLPI---HGDASAKAALYRDRFLLLSQRLSRDQHFSKPAF----DIGMSHFGSCEISPIQSLVGQTGR---KWVMGVISQ

Query:  MEDGHFYLEDLTASVEINLSSAISFTG
        +++G ++LED T  V+++LS A   +G
Subjt:  MEDGHFYLEDLTASVEINLSSAISFTG

Arabidopsis top hitse value%identityAlignment
AT5G22110.1 DNA polymerase epsilon subunit B23.5e-5757.75Show/hide
Query:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFED-EAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKF
        RKK+Q+K K RG Y++K +ALDEI+ F  +    +D EAI+ +LDNL +E+ KS  +D ++V  +I+ ++ A    EE     TS S+L II+AF +PKF
Subjt:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFED-EAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKF

Query:  RYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE
         YD +KK F  HT +LPIHG+ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMGVISQ+EDGHFYLEDL+ASVE
Subjt:  RYDPIKKIF-LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE

Query:  INLSSAISFTGNF
        I+LS A   TG F
Subjt:  INLSSAISFTGNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTC
CCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTA
TGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATA
AAAAAGATCTTTCTGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGA
TCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGG
GAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACTGGCAACTTCTATGATGTG
GAAAAATCTGAACTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTC
CCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTA
TGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATA
AAAAAGATCTTTCTGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGA
TCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGG
GAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACTGGCAACTTCTATGATGTG
GAAAAATCTGAACTTGTTTGATATTTGAAGATGACATGCCCTGCAGTTTTCATTAATAGTTAGCACAAGATAACTACAGGTCTATTTACA
Protein sequenceShow/hide protein sequence
MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPI
KKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDV
EKSELV