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CSPI01G21280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G21280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr1:16832329..16833095
RNA-Seq ExpressionCSPI01G21280
SyntenyCSPI01G21280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583907.1 hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia]6.2e-8873.93Show/hide
Query:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----LPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHP
        P P PP +SLHS+FFSSLKQVEKRLKLDH SQRD L PP P     LPV   SSS+ E+SLSTPMYLH PQTNT+S+LQESS+ P EFLS+SS       
Subjt:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----LPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHP

Query:  KSESNPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLL
        KSESN P  I  G NR VDDIQRL+QLLGL DS +E+E GA++GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++  NGG E +RLEPLRLAYLL
Subjt:  KSESNPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLL

Query:  LGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA
        +GKAVFASN  D CLEGLEFPSTVEDFLLNDPPA
Subjt:  LGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA

KGN65550.1 hypothetical protein Csa_019856 [Cucumis sativus]1.8e-12799.13Show/hide
Query:  MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES
        MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQS PSHPKSES
Subjt:  MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES

Query:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
        NPPKPI RGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
Subjt:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA

Query:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
        VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL

XP_004147438.2 uncharacterized protein LOC101217056 [Cucumis sativus]1.8e-12799.13Show/hide
Query:  MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES
        MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQS PSHPKSES
Subjt:  MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES

Query:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
        NPPKPI RGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
Subjt:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA

Query:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
        VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL

XP_008444181.1 PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo]9.6e-11390.04Show/hide
Query:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES
        P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S S PSHPKS S
Subjt:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES

Query:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
        NPP  I RGQNRD+DDIQRLIQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLAYLLLGKA
Subjt:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA

Query:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
        VFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL

XP_038895328.1 uncharacterized protein LOC120083579 [Benincasa hispida]1.3e-10685.59Show/hide
Query:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSESN
        P P PP +SLHSNFFSSLKQVEKRLKLDH SQRDVLHPPP  PV TNSSS+ EDSLSTPMYLHFPQTNT S LQESS+ PLEFLS+SSQS PSHPKSESN
Subjt:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSESN

Query:  PPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKAV
        P K I RGQN  V DIQRLIQLLGL +SCDE E GAKNGCNGCEGCESGFYSKIVGLKGPKC+KEVERLNGWIEFFSNGG EE+RLEPLRLAYLL GK+V
Subjt:  PPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKAV

Query:  FASNDDDGCLEGLEFPSTVEDFLLNDPPA
        FASN DDGCLEG+EFPSTVEDFLLNDPPA
Subjt:  FASNDDDGCLEGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein8.7e-12899.13Show/hide
Query:  MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES
        MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQS PSHPKSES
Subjt:  MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES

Query:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
        NPPKPI RGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
Subjt:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA

Query:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
        VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL

A0A1S3B9V1 uncharacterized protein LOC1034875964.6e-11390.04Show/hide
Query:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES
        P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S S PSHPKS S
Subjt:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES

Query:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
        NPP  I RGQNRD+DDIQRLIQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLAYLLLGKA
Subjt:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA

Query:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
        VFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL

A0A5A7UHE6 Uncharacterized protein4.6e-11390.04Show/hide
Query:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES
        P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S S PSHPKS S
Subjt:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSES

Query:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA
        NPP  I RGQNRD+DDIQRLIQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLAYLLLGKA
Subjt:  NPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKA

Query:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
        VFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  VFASNDDDGCLEGLEFPSTVEDFLLNDPPAL

A0A6J1END4 uncharacterized protein LOC1114341554.4e-8773.5Show/hide
Query:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHP
        P P  P +SLHS+FFSSLKQVEKRLKLD+ SQRD L PP     P LPV  +SSS+ E+SLSTPMYLH PQTNT+S+LQESS+ P EFLS+SS       
Subjt:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHP

Query:  KSESNPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLL
        KSESN P  I  GQNR VDDIQRL+QLLGL DS +E+E GA++GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI +F  GG E +RLEPLRLAYLL
Subjt:  KSESNPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLL

Query:  LGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA
        +GKAVFASN  D CLEGLEFPSTVEDFLLNDPPA
Subjt:  LGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955902.0e-8773.5Show/hide
Query:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHP
        P P PP +SLHS+FFSSLKQVEKRLKLD+ SQRD L PP     P LPV  +SSS+ E+SLSTPMYLH  QTNT+S+LQESS+ P EFLS+SS       
Subjt:  PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHP

Query:  KSESNPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLL
        KSESN P  I  GQNR VDDIQRL+QLLG  DS +EKE GA++GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F  GG E +RLEPLRLAYLL
Subjt:  KSESNPPKPIYRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLL

Query:  LGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA
        +GKAVFASN  D CLEGLEFPSTVEDFLLNDPPA
Subjt:  LGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTGCCGGCACCGCCGTGTTTATCTCTTCACTCCAATTTCTTTTCCTCTCTTAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGACGTTCT
TCATCCACCACCGCCATTGCCAGTACGAACCAATTCTTCTTCAACTGAAGAAGACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCTCCACCC
TACAAGAAAGCAGCCAAGCGCCACTCGAATTCCTCTCAAGTTCCTCCCAGTCTTCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAAACCCATATATCGTGGTCAA
AATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTCGGAGCTAAGAATGGCTGTAATGGCTGTGAGGGATG
TGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTGATGAAG
AAGACAGGTTAGAGCCTCTTAGACTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGACGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCAACTGTA
GAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCTGCCGGCACCGCCGTGTTTATCTCTTCACTCCAATTTCTTTTCCTCTCTTAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGACGTTCT
TCATCCACCACCGCCATTGCCAGTACGAACCAATTCTTCTTCAACTGAAGAAGACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCTCCACCC
TACAAGAAAGCAGCCAAGCGCCACTCGAATTCCTCTCAAGTTCCTCCCAGTCTTCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAAACCCATATATCGTGGTCAA
AATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTCGGAGCTAAGAATGGCTGTAATGGCTGTGAGGGATG
TGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTGATGAAG
AAGACAGGTTAGAGCCTCTTAGACTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGACGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCAACTGTA
GAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG
Protein sequenceShow/hide protein sequence
MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSSPSHPKSESNPPKPIYRGQ
NRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTV
EDFLLNDPPAL