CuGenDBv2

Gene ID	CSPI01G21300
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Calmodulin-binding transcription activator 3-like isoform X3
Genome location	Chr1:16847648..16848055
RNA-Seq Expression	CSPI01G21300
Synteny	CSPI01G21300
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0003690 - double-stranded DNA binding (molecular function) GO:0003712 - transcription coregulator activity (molecular function) GO:0005516 - calmodulin binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYJ96237.1 calmodulin-binding transcription activator 3-like isoform X3 [Cucumis melo var. makuwa]

3.2e-52

86.07

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEYREK PTLS PNA KCAPEDELWFQM LIRLLNLGSEENLLK SI+KCEKCQIIGLINSSR+DVAKW MT   +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

XP_008448813.1 PREDICTED: calmodulin-binding transcription activator 3-like isoform X1 [Cucumis melo]

3.2e-52

86.07

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEYREK PTLS PNA KCAPEDELWFQM LIRLLNLGSEENLLK SI+KCEKCQIIGLINSSR+DVAKW MT   +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

XP_008448822.1 PREDICTED: calmodulin-binding transcription activator 3-like isoform X2 [Cucumis melo]

3.2e-52

86.07

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEYREK PTLS PNA KCAPEDELWFQM LIRLLNLGSEENLLK SI+KCEKCQIIGLINSSR+DVAKW MT   +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

XP_008448838.1 PREDICTED: calmodulin-binding transcription activator 3-like isoform X3 [Cucumis melo]

3.2e-52

86.07

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEYREK PTLS PNA KCAPEDELWFQM LIRLLNLGSEENLLK SI+KCEKCQIIGLINSSR+DVAKW MT   +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

XP_031740246.1 calmodulin-binding transcription activator 3 isoform X3 [Cucumis sativus]

1.4e-47

81.15

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEY EK  TLS PNA KCAPEDELWFQM LIRLLNLGSEENL   S  KCEKCQIIGLINSSR+DVAKW M    +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXL3 Uncharacterized protein

9.8e-71

97.04

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Query:  MYFDVELLLCMLQPGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDV
        MYF+VELLLCMLQPGRI FY+TCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLL YSIKKCEKCQIIGLINSSRNDV
Subjt:  MYFDVELLLCMLQPGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDV

Query:  AKWRMTKGSQGSIKSDGMNHNDYMIQSLLEDKLCK
        AKWRMTKGSQGSIKSDGMNHNDYMIQSLLEDKLCK
Subjt:  AKWRMTKGSQGSIKSDGMNHNDYMIQSLLEDKLCK

A0A1S3BKL3 calmodulin-binding transcription activator 3-like isoform X2

1.6e-52

86.07

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEYREK PTLS PNA KCAPEDELWFQM LIRLLNLGSEENLLK SI+KCEKCQIIGLINSSR+DVAKW MT   +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

A0A1S3BLJ0 calmodulin-binding transcription activator 3-like isoform X3

1.6e-52

86.07

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEYREK PTLS PNA KCAPEDELWFQM LIRLLNLGSEENLLK SI+KCEKCQIIGLINSSR+DVAKW MT   +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

A0A5A7TPI2 Calmodulin-binding transcription activator 3-like isoform X2

1.6e-52

86.07

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEYREK PTLS PNA KCAPEDELWFQM LIRLLNLGSEENLLK SI+KCEKCQIIGLINSSR+DVAKW MT   +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

A0A5D3BAV0 Calmodulin-binding transcription activator 3-like isoform X3

1.6e-52

86.07

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Query:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI
        PGRI FY+TC NRLACSEVREFEYREK PTLS PNA KCAPEDELWFQM LIRLLNLGSEENLLK SI+KCEKCQIIGLINSSR+DVAKW MT   +GS+
Subjt:  PGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQGSI

Query:  KSDGMNHNDYMIQSLLEDKLCK
        KSDGMNH DYMIQSLLEDKLCK
Subjt:  KSDGMNHNDYMIQSLLEDKLCK

SwissProt top hits

e value

%identity

Alignment

Q8GSA7 Calmodulin-binding transcription activator 3

9.0e-05

71.43

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Query:  MLQPGRISFYMTCYNRLACSEVREFEYR
        M + GR+ FY+TC NRLACSEVREFEY+
Subjt:  MLQPGRISFYMTCYNRLACSEVREFEYR

Q9FYG2 Calmodulin-binding transcription activator 4

1.2e-04

28.57

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Query:  PGRISFYMTCYNRLACSEVREFEYREK----TPTLSRPNA--LKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTK
        PG+++  +T  + L CSE+REFEYREK     P  S P    +  +P + +     +  LL+  S E   K +++         L+   + D  +WR   
Subjt:  PGRISFYMTCYNRLACSEVREFEYREK----TPTLSRPNA--LKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTK

Query:  GSQGSIKSDGMNHNDYMIQSLLEDKL
        G+     +   +  D+++Q LL+DKL
Subjt:  GSQGSIKSDGMNHNDYMIQSLLEDKL

Arabidopsis top hits

e value

%identity

Alignment

AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains

8.3e-06

28.57

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Query:  PGRISFYMTCYNRLACSEVREFEYREK----TPTLSRPNA--LKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTK
        PG+++  +T  + L CSE+REFEYREK     P  S P    +  +P + +     +  LL+  S E   K +++         L+   + D  +WR   
Subjt:  PGRISFYMTCYNRLACSEVREFEYREK----TPTLSRPNA--LKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTK

Query:  GSQGSIKSDGMNHNDYMIQSLLEDKL
        G+     +   +  D+++Q LL+DKL
Subjt:  GSQGSIKSDGMNHNDYMIQSLLEDKL

AT2G22300.1 signal responsive 1

6.4e-06

71.43

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Query:  MLQPGRISFYMTCYNRLACSEVREFEYR
        M + GR+ FY+TC NRLACSEVREFEY+
Subjt:  MLQPGRISFYMTCYNRLACSEVREFEYR

AT2G22300.2 signal responsive 1

6.4e-06

71.43

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Query:  MLQPGRISFYMTCYNRLACSEVREFEYR
        M + GR+ FY+TC NRLACSEVREFEY+
Subjt:  MLQPGRISFYMTCYNRLACSEVREFEYR

Sequences

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CDS sequence

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ATGTACTTCGATGTTGAACTCCTCCTTTGCATGCTCCAGCCTGGGCGTATTTCTTTCTATATGACATGCTATAATAGGCTTGCCTGCAGTGAGGTTAGAGAGTTTGAATA
TCGTGAGAAGACACCAACCCTTTCAAGACCTAATGCTCTCAAGTGTGCACCCGAAGATGAATTATGGTTTCAAATGTGTCTGATAAGATTATTGAATTTAGGTTCAGAGG
AAAATTTGTTGAAGTACTCTATTAAAAAATGTGAGAAATGCCAAATCATAGGTTTGATAAATTCATCCAGAAATGATGTTGCAAAATGGAGAATGACAAAAGGTTCACAA
GGTTCAATAAAAAGTGATGGGATGAACCATAACGATTATATGATCCAAAGTTTGTTGGAGGACAAACTATGCAAGTAG

mRNA sequence

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Protein sequence

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MYFDVELLLCMLQPGRISFYMTCYNRLACSEVREFEYREKTPTLSRPNALKCAPEDELWFQMCLIRLLNLGSEENLLKYSIKKCEKCQIIGLINSSRNDVAKWRMTKGSQ
GSIKSDGMNHNDYMIQSLLEDKLCK

CSPI01G21300 (gene) of Cucumber (PI 183967) v1 genome