; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G21400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G21400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprefoldin subunit 6
Genome locationChr1:17002921..17003861
RNA-Seq ExpressionCSPI01G21400
SyntenyCSPI01G21400
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0043622 - cortical microtubule organization (biological process)
GO:0051131 - chaperone-mediated protein complex assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653194.1 hypothetical protein Csa_019528 [Cucumis sativus]4.1e-39100Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

XP_004147411.1 prefoldin subunit 6 [Cucumis sativus]4.1e-39100Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

XP_008444032.1 PREDICTED: prefoldin subunit 6 [Cucumis melo]7.7e-3895.65Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSS++ALRE+QRELEAKANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

XP_022140149.1 prefoldin subunit 6-like [Momordica charantia]5.5e-3692.39Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSS++ALRE+QRELEAKAN+LSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

XP_038895368.1 prefoldin subunit 6 [Benincasa hispida]2.5e-3693.48Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSS++ALRE+QRELE KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

TrEMBL top hitse value%identityAlignment
A0A1S3B9I1 prefoldin subunit 63.7e-3895.65Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSS++ALRE+QRELEAKANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

A0A200QNM8 Prefoldin beta-like3.5e-3692.39Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSS++ALRE+QRELE KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL DD NV+KLIGPVLVKQDLAEANANVRKRIEYISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

A0A5B6YMY9 Putative prefoldin subunit 64.6e-3692.39Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        M SSTALRE+QRELE KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL +D NVYKLIGPVLVKQD+AEANANVRKRIEYISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

A0A6J1CEX4 prefoldin subunit 6-like2.7e-3692.39Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSS++ALRE+QRELEAKAN+LSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

A0A6J1EGS1 prefoldin subunit 6-like4.6e-3690.22Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSS++A+RE+QRELE+KANDLSKLQKDIAKNHQ+RKKYTIQLGENELVLKELDLL+DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

SwissProt top hitse value%identityAlignment
O15212 Prefoldin subunit 64.0e-1346.99Show/hide
Query:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+
Subjt:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

Q03958 Prefoldin subunit 64.0e-1346.99Show/hide
Query:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+
Subjt:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

Q17Q89 Prefoldin subunit 64.0e-1346.99Show/hide
Query:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+
Subjt:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

Q5TJE6 Prefoldin subunit 64.0e-1346.99Show/hide
Query:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+
Subjt:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

Q9VW56 Probable prefoldin subunit 67.6e-1250Show/hide
Query:  SSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        S+   +++Q E+E+  N    LQK   K  + R     QL EN+ VL EL+LL  D  VYKL GPVLVKQ+L E+  NV KRIEYIS EL
Subjt:  SSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL

Arabidopsis top hitse value%identityAlignment
AT1G29990.1 prefoldin 62.6e-3685.87Show/hide
Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
        MSSST +R++QR+LE KANDL K+QKDI KNHQ+RKKYTIQLGENELVLKELDLL++D NVYKLIGPVLVKQDLAEANANVRKRIEYISAEL
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTTCAACCGCTCTTCGAGAGGTACAGCGCGAGTTGGAGGCGAAAGCCAACGATCTCAGCAAGCTACAGAAAGATATTGCGAAGAATCACCAAGTGAGGAAGAA
GTACACTATTCAGCTGGGTGAGAACGAGCTCGTTCTTAAGGAATTGGATTTACTTCAAGACGACACAAATGTATATAAACTGATTGGTCCAGTGCTCGTGAAGCAAGATT
TGGCAGAAGCAAATGCGAATGTCCGCAAGAGAATTGAATACATCTCCGCAGAATTGTGTGTTTCTTCATCTGTTTTCCATATAGTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
GCCCCCTTTGGCGTTAATTCCTACCATTTCTGTTCTCCAAAACCTTCCGCTCGCAGGTTTTCCCAGGGACACAGAGGAAGTAGACGATTCTCAGTCGGAATGAGTTCTTC
AACCGCTCTTCGAGAGGTACAGCGCGAGTTGGAGGCGAAAGCCAACGATCTCAGCAAGCTACAGAAAGATATTGCGAAGAATCACCAAGTGAGGAAGAAGTACACTATTC
AGCTGGGTGAGAACGAGCTCGTTCTTAAGGAATTGGATTTACTTCAAGACGACACAAATGTATATAAACTGATTGGTCCAGTGCTCGTGAAGCAAGATTTGGCAGAAGCA
AATGCGAATGTCCGCAAGAGAATTGAATACATCTCCGCAGAATTGTGTGTTTCTTCATCTGTTTTCCATATAGTTTTTTAG
Protein sequenceShow/hide protein sequence
MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELCVSSSVFHIVF