; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G21690 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G21690
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationChr1:17268320..17272438
RNA-Seq ExpressionCSPI01G21690
SyntenyCSPI01G21690
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.4e-11566.76Show/hide
Query:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ
        MVT VDTSE+RM ELEKKVN+LMKA+EERD+EI  LKN IESRDA ESSHT+T+KNA+KGKAIMQESQPQNSTSIASL VQ LQEMIANSIKTQYGGP Q
Subjt:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ

Query:  IFSLYSKPYTKRIDNLRMLNG--------------------------------------------------------------WEQLERDFLNRFYSTRR
         FSLYSKPYTKRIDN+RM +G                                                              WEQLERDFLNRFYSTRR
Subjt:  IFSLYSKPYTKRIDNLRMLNG--------------------------------------------------------------WEQLERDFLNRFYSTRR

Query:  IVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVK
        IV MIELTATKQR  EPV+DYINRWRALSLDC+DRLTEL  VEMCTQGMHWGL+YILQGIKPRTFE+LATR HD+ELSIANRGNND LV E+RKEKKEVK
Subjt:  IVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVK

Query:  STQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADE
        STQK  KG TKE MV++T PLK +SKEKK EKRQ+E EKR+  +++  E
Subjt:  STQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADE

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]7.2e-6481.94Show/hide
Query:  NAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLDPMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGK
        + QLSD+DENEYV+LLKAYKDVFAWSYKEM  LDP V VH L IK EHR VKQAQR+FR +LISQIEEEVNKLIEAGFIREVK P WIANIVPVRKKNG+
Subjt:  NAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLDPMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGK

Query:  LRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRMGLED
        LRVCVDF +LNNACPKDDF LPI+EIM+DAT+ HEALSFMD SSGYN IRM LED
Subjt:  LRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRMGLED

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.0e-10662.16Show/hide
Query:  SENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSK
        S  +     KKVN+LMKA+EERD+EI  LKN I SRDA ESSHT+  KN +KGKAIMQESQPQNSTSIASL VQ LQEMI NSIKTQYGGP Q+FSLYSK
Subjt:  SENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSK

Query:  PYTKRIDNLRMLNG-----------------------------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCED
        PYTKRIDN+RM +G                                   WEQLERDFLNRFYST RIV MIELTATKQR  EPV+DYINRWRALSLDC+D
Subjt:  PYTKRIDNLRMLNG-----------------------------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCED

Query:  RLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQ
        RLTEL  VEMCTQGMHWGL+YILQGIKPRTFE+LATR +D+ELSIANRGNND LV E+RKEKKEVKSTQKV KGATKE MVI+T PLK +SKEKK EKRQ
Subjt:  RLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQ

Query:  EEDEKRQKKVEDADEG-YTLVTHQKNAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRL-DPMVVVHHLVI
        +E EKR   +++  E  Y  +       L    E + + L +  +        EM R+ DP    +H VI
Subjt:  EEDEKRQKKVEDADEG-YTLVTHQKNAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRL-DPMVVVHHLVI

KAA0047542.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.0e-10271.33Show/hide
Query:  ILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSKPYTKRIDNLRM--
        +LMKA+EERD EI  LKN IESRDA ESSHT+T+KNA+KGKAIMQESQPQNSTSIASL VQ LQEMIANSIKTQYGGP Q FSLYSKPYTKRIDN+RM  
Subjt:  ILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSKPYTKRIDNLRM--

Query:  ------LNGWEQ------------------LERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYI
               N   +                  LERDFLNRFYST RIV M ELTATKQR  EPVVDYIN WRALSLDC+ RLTEL  VEMCTQGMHWGL+YI
Subjt:  ------LNGWEQ------------------LERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYI

Query:  LQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADE
        LQGIKPRTFE+LATR HD+ELSIANR NND LV E+RKEKKEVKST+KV KGATKE M ++T PLK +SKEKK EKRQ+E EKR+  +++  E
Subjt:  LQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADE

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.3e-10567.28Show/hide
Query:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ
        MVT VDTSE+RM  LEKKVN+ MKA+EERD+EI  LKN IESRDA ESSHT+T+KNA+KGKAIMQESQPQNSTSIASL VQ LQEMIANSIKTQYGGP Q
Subjt:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ

Query:  IFSLYSKPYTK-------------------RIDNL-----RMLNG----------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYI
            ++    +                   R D L     R L G                WEQLERDFLNRFYSTRRIV MIELTATKQR  EPV+DYI
Subjt:  IFSLYSKPYTK-------------------RIDNL-----RMLNG----------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYI

Query:  NRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLK
        NRWRALSLDC+DRLTEL  VEMCTQGMHWGL+YILQGIKPRTFE+LATR HD+ELSIANRGNND LV E+RKEKKEVKSTQK  KG TKE MV++T PLK
Subjt:  NRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLK

Query:  FISKEKKFEKRQEEDEKRQKKVEDADE
         +SKEKK EKRQ+E EKR+  +++  E
Subjt:  FISKEKKFEKRQEEDEKRQKKVEDADE

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]7.2e-6481.94Show/hide
Query:  NAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLDPMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGK
        + QLSD+DENEYV+LLKAYKDVFAWSYKEM  LDP V VH L IK EHR VKQAQR+FR +LISQIEEEVNKLIEAGFIREVK P WIANIVPVRKKNG+
Subjt:  NAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLDPMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGK

Query:  LRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRMGLED
        LRVCVDF +LNNACPKDDF LPI+EIM+DAT+ HEALSFMD SSGYN IRM LED
Subjt:  LRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRMGLED

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]2.2e-10567.58Show/hide
Query:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ
        MVT VDTSE+RM  LEKKVN+ MKA+EERD+EI  LKN IESRDA ESSHT+T+KNA+KGKAIMQESQPQNSTSIASL VQ LQEMIANSIKTQYGGP Q
Subjt:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ

Query:  IFSLYSKPYTK-------------------RIDNL-----RMLNG----------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYI
            ++    +                   R D L     R L G                WEQLERDFLNRFYSTRRIV MIELTATKQR  EPV+DYI
Subjt:  IFSLYSKPYTK-------------------RIDNL-----RMLNG----------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYI

Query:  NRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLK
        N WRALSLDC+DRLTEL  VEMCTQGMHWGLMYILQGIKPRTFE+LATR HD+ELSIANRGNND LV E+RKEKKEVKSTQKV KGATKE MV++T PLK
Subjt:  NRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLK

Query:  FISKEKKFEKRQEEDEKRQKKVEDADE
         +SKEKK EK Q+E EKR+  +++  E
Subjt:  FISKEKKFEKRQEEDEKRQKKVEDADE

TrEMBL top hitse value%identityAlignment
A0A5A7TVR2 Ty3-gypsy retrotransposon protein1.4e-10271.33Show/hide
Query:  ILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSKPYTKRIDNLRM--
        +LMKA+EERD EI  LKN IESRDA ESSHT+T+KNA+KGKAIMQESQPQNSTSIASL VQ LQEMIANSIKTQYGGP Q FSLYSKPYTKRIDN+RM  
Subjt:  ILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSKPYTKRIDNLRM--

Query:  ------LNGWEQ------------------LERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYI
               N   +                  LERDFLNRFYST RIV M ELTATKQR  EPVVDYIN WRALSLDC+ RLTEL  VEMCTQGMHWGL+YI
Subjt:  ------LNGWEQ------------------LERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYI

Query:  LQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADE
        LQGIKPRTFE+LATR HD+ELSIANR NND LV E+RKEKKEVKST+KV KGATKE M ++T PLK +SKEKK EKRQ+E EKR+  +++  E
Subjt:  LQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADE

A0A5A7TZU9 Ribonuclease H1.1e-11566.76Show/hide
Query:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ
        MVT VDTSE+RM ELEKKVN+LMKA+EERD+EI  LKN IESRDA ESSHT+T+KNA+KGKAIMQESQPQNSTSIASL VQ LQEMIANSIKTQYGGP Q
Subjt:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ

Query:  IFSLYSKPYTKRIDNLRMLNG--------------------------------------------------------------WEQLERDFLNRFYSTRR
         FSLYSKPYTKRIDN+RM +G                                                              WEQLERDFLNRFYSTRR
Subjt:  IFSLYSKPYTKRIDNLRMLNG--------------------------------------------------------------WEQLERDFLNRFYSTRR

Query:  IVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVK
        IV MIELTATKQR  EPV+DYINRWRALSLDC+DRLTEL  VEMCTQGMHWGL+YILQGIKPRTFE+LATR HD+ELSIANRGNND LV E+RKEKKEVK
Subjt:  IVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVK

Query:  STQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADE
        STQK  KG TKE MV++T PLK +SKEKK EKRQ+E EKR+  +++  E
Subjt:  STQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADE

A0A5A7TZU9 Ribonuclease H3.5e-6481.94Show/hide
Query:  NAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLDPMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGK
        + QLSD+DENEYV+LLKAYKDVFAWSYKEM  LDP V VH L IK EHR VKQAQR+FR +LISQIEEEVNKLIEAGFIREVK P WIANIVPVRKKNG+
Subjt:  NAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLDPMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGK

Query:  LRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRMGLED
        LRVCVDF +LNNACPKDDF LPI+EIM+DAT+ HEALSFMD SSGYN IRM LED
Subjt:  LRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRMGLED

A0A5A7TZU9 Ribonuclease H9.7e-10762.16Show/hide
Query:  SENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSK
        S  +     KKVN+LMKA+EERD+EI  LKN I SRDA ESSHT+  KN +KGKAIMQESQPQNSTSIASL VQ LQEMI NSIKTQYGGP Q+FSLYSK
Subjt:  SENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSK

Query:  PYTKRIDNLRMLNG-----------------------------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCED
        PYTKRIDN+RM +G                                   WEQLERDFLNRFYST RIV MIELTATKQR  EPV+DYINRWRALSLDC+D
Subjt:  PYTKRIDNLRMLNG-----------------------------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCED

Query:  RLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQ
        RLTEL  VEMCTQGMHWGL+YILQGIKPRTFE+LATR +D+ELSIANRGNND LV E+RKEKKEVKSTQKV KGATKE MVI+T PLK +SKEKK EKRQ
Subjt:  RLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQ

Query:  EEDEKRQKKVEDADEG-YTLVTHQKNAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRL-DPMVVVHHLVI
        +E EKR   +++  E  Y  +       L    E + + L +  +        EM R+ DP    +H VI
Subjt:  EEDEKRQKKVEDADEG-YTLVTHQKNAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRL-DPMVVVHHLVI

A0A5D3BIH8 Uncharacterized protein6.3e-10667.28Show/hide
Query:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ
        MVT VDTSE+RM  LEKKVN+ MKA+EERD+EI  LKN IESRDA ESSHT+T+KNA+KGKAIMQESQPQNSTSIASL VQ LQEMIANSIKTQYGGP Q
Subjt:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ

Query:  IFSLYSKPYTK-------------------RIDNL-----RMLNG----------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYI
            ++    +                   R D L     R L G                WEQLERDFLNRFYSTRRIV MIELTATKQR  EPV+DYI
Subjt:  IFSLYSKPYTK-------------------RIDNL-----RMLNG----------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYI

Query:  NRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLK
        NRWRALSLDC+DRLTEL  VEMCTQGMHWGL+YILQGIKPRTFE+LATR HD+ELSIANRGNND LV E+RKEKKEVKSTQK  KG TKE MV++T PLK
Subjt:  NRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLK

Query:  FISKEKKFEKRQEEDEKRQKKVEDADE
         +SKEKK EKRQ+E EKR+  +++  E
Subjt:  FISKEKKFEKRQEEDEKRQKKVEDADE

A0A5D3BIH8 Uncharacterized protein3.5e-6481.94Show/hide
Query:  NAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLDPMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGK
        + QLSD+DENEYV+LLKAYKDVFAWSYKEM  LDP V VH L IK EHR VKQAQR+FR +LISQIEEEVNKLIEAGFIREVK P WIANIVPVRKKNG+
Subjt:  NAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLDPMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGK

Query:  LRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRMGLED
        LRVCVDF +LNNACPKDDF LPI+EIM+DAT+ HEALSFMD SSGYN IRM LED
Subjt:  LRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRMGLED

A0A5D3BIH8 Uncharacterized protein1.1e-10567.58Show/hide
Query:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ
        MVT VDTSE+RM  LEKKVN+ MKA+EERD+EI  LKN IESRDA ESSHT+T+KNA+KGKAIMQESQPQNSTSIASL VQ LQEMIANSIKTQYGGP Q
Subjt:  MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQ

Query:  IFSLYSKPYTK-------------------RIDNL-----RMLNG----------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYI
            ++    +                   R D L     R L G                WEQLERDFLNRFYSTRRIV MIELTATKQR  EPV+DYI
Subjt:  IFSLYSKPYTK-------------------RIDNL-----RMLNG----------------WEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYI

Query:  NRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLK
        N WRALSLDC+DRLTEL  VEMCTQGMHWGLMYILQGIKPRTFE+LATR HD+ELSIANRGNND LV E+RKEKKEVKSTQKV KGATKE MV++T PLK
Subjt:  NRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANRGNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLK

Query:  FISKEKKFEKRQEEDEKRQKKVEDADE
         +SKEKK EK Q+E EKR+  +++  E
Subjt:  FISKEKKFEKRQEEDEKRQKKVEDADE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.0e-0431.11Show/hide
Query:  IEEEVNKLIEAGFIREVK----CPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRM
        + +E+N+ +++G IRE K    CP+       V KK G LR+ VD+  LN     + + LP+IE ++         + +D+ S Y+ IR+
Subjt:  IEEEVNKLIEAGFIREVK----CPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRM

P0CT41 Transposon Tf2-12 polyprotein3.0e-0431.11Show/hide
Query:  IEEEVNKLIEAGFIREVK----CPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRM
        + +E+N+ +++G IRE K    CP+       V KK G LR+ VD+  LN     + + LP+IE ++         + +D+ S Y+ IR+
Subjt:  IEEEVNKLIEAGFIREVK----CPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRM

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.3e-0733.05Show/hide
Query:  VVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEAL
        V H + IK   RL +        K   +I + V KL++  FI   K P   + +V V KK+G  R+CVD+  LN A   D F LP I+ ++      +  
Subjt:  VVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEAL

Query:  SFMDVSSGYNHIRMGLED
        + +D+ SGY+ I M  +D
Subjt:  SFMDVSSGYNHIRMGLED

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.3e-0733.05Show/hide
Query:  VVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEAL
        V H + IK   RL +        K   +I + V KL++  FI   K P   + +V V KK+G  R+CVD+  LN A   D F LP I+ ++      +  
Subjt:  VVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEAL

Query:  SFMDVSSGYNHIRMGLED
        + +D+ SGY+ I M  +D
Subjt:  SFMDVSSGYNHIRMGLED

Q9UR07 Transposon Tf2-11 polyprotein3.0e-0431.11Show/hide
Query:  IEEEVNKLIEAGFIREVK----CPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRM
        + +E+N+ +++G IRE K    CP+       V KK G LR+ VD+  LN     + + LP+IE ++         + +D+ S Y+ IR+
Subjt:  IEEEVNKLIEAGFIREVK----CPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSSGYNHIRM

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACTGGCGTGGATACAAGCGAAAATAGAATGACAGAGCTTGAAAAAAAGGTCAACATACTCATGAAGGCGCTTGAAGAAAGGGACTACGAGATTAAATCTCTAAA
GAATCAGATCGAGAGTCGAGACGCTACTGAATCAAGTCACACAAATACTGTCAAGAATGCTGACAAAGGGAAGGCAATTATGCAAGAAAGTCAACCACAAAATTCGACTT
CAATTGCATCTTTATTTGTCCAGCCGTTGCAGGAGATGATTGCAAACTCCATTAAAACTCAATATGGTGGACCCACTCAAATTTTCTCTTTGTATTCCAAGCCGTATACG
AAAAGGATTGACAACCTGAGAATGCTGAATGGTTGGGAGCAGCTTGAGAGGGACTTTCTCAATCGTTTCTACAGCACTCGTCGTATTGTCGGCATGATAGAGCTAACTGC
CACCAAGCAGAGAATGAGTGAGCCAGTCGTCGATTATATCAACCGTTGGAGAGCATTAAGCCTTGATTGCGAAGATAGATTAACTGAACTGCCGACAGTAGAGATGTGTA
CTCAAGGAATGCATTGGGGACTCATGTACATCTTGCAGGGAATAAAACCCCGCACCTTTGAGAAGTTAGCAACTAGAACTCATGATATAGAACTAAGTATAGCTAATAGA
GGGAACAATGATTTTCTGGTTTCAGAAATTAGAAAAGAGAAGAAAGAAGTAAAGAGCACCCAAAAGGTATCGAAAGGTGCTACCAAGGAGGATATGGTCATCACAACGGC
CCCTTTGAAGTTTATCTCCAAAGAAAAGAAATTTGAGAAACGCCAAGAAGAAGACGAAAAAAGACAAAAGAAAGTAGAGGATGCCGATGAGGGATATACACTAGTAACGC
ATCAAAAGAACGCCCAACTTTCTGATGATGACGAAAACGAGTATGTGAGCTTACTAAAAGCGTACAAAGATGTCTTTGCATGGTCATATAAGGAAATGTCTAGACTTGAT
CCAATGGTGGTTGTTCATCATTTAGTAATCAAACTAGAGCATCGGCTTGTCAAGCAAGCCCAGAGACAATTTCGATCCAAACTCATTTCTCAAATTGAGGAAGAGGTAAA
TAAGCTCATTGAAGCTGGATTTATTCGCGAAGTCAAGTGCCCAATATGGATAGCTAATATTGTTCCAGTAAGGAAAAAGAATGGCAAGTTACGTGTTTGTGTTGATTTTC
ACAACCTAAATAACGCATGTCCAAAGGATGATTTTTCCTTGCCAATTATAGAAATCATGGTAGACGCAACTTCAAGACATGAAGCTTTGTCTTTCATGGATGTGTCATCA
GGATATAATCATATTCGAATGGGTCTTGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGACTGGCGTGGATACAAGCGAAAATAGAATGACAGAGCTTGAAAAAAAGGTCAACATACTCATGAAGGCGCTTGAAGAAAGGGACTACGAGATTAAATCTCTAAA
GAATCAGATCGAGAGTCGAGACGCTACTGAATCAAGTCACACAAATACTGTCAAGAATGCTGACAAAGGGAAGGCAATTATGCAAGAAAGTCAACCACAAAATTCGACTT
CAATTGCATCTTTATTTGTCCAGCCGTTGCAGGAGATGATTGCAAACTCCATTAAAACTCAATATGGTGGACCCACTCAAATTTTCTCTTTGTATTCCAAGCCGTATACG
AAAAGGATTGACAACCTGAGAATGCTGAATGGTTGGGAGCAGCTTGAGAGGGACTTTCTCAATCGTTTCTACAGCACTCGTCGTATTGTCGGCATGATAGAGCTAACTGC
CACCAAGCAGAGAATGAGTGAGCCAGTCGTCGATTATATCAACCGTTGGAGAGCATTAAGCCTTGATTGCGAAGATAGATTAACTGAACTGCCGACAGTAGAGATGTGTA
CTCAAGGAATGCATTGGGGACTCATGTACATCTTGCAGGGAATAAAACCCCGCACCTTTGAGAAGTTAGCAACTAGAACTCATGATATAGAACTAAGTATAGCTAATAGA
GGGAACAATGATTTTCTGGTTTCAGAAATTAGAAAAGAGAAGAAAGAAGTAAAGAGCACCCAAAAGGTATCGAAAGGTGCTACCAAGGAGGATATGGTCATCACAACGGC
CCCTTTGAAGTTTATCTCCAAAGAAAAGAAATTTGAGAAACGCCAAGAAGAAGACGAAAAAAGACAAAAGAAAGTAGAGGATGCCGATGAGGGATATACACTAGTAACGC
ATCAAAAGAACGCCCAACTTTCTGATGATGACGAAAACGAGTATGTGAGCTTACTAAAAGCGTACAAAGATGTCTTTGCATGGTCATATAAGGAAATGTCTAGACTTGAT
CCAATGGTGGTTGTTCATCATTTAGTAATCAAACTAGAGCATCGGCTTGTCAAGCAAGCCCAGAGACAATTTCGATCCAAACTCATTTCTCAAATTGAGGAAGAGGTAAA
TAAGCTCATTGAAGCTGGATTTATTCGCGAAGTCAAGTGCCCAATATGGATAGCTAATATTGTTCCAGTAAGGAAAAAGAATGGCAAGTTACGTGTTTGTGTTGATTTTC
ACAACCTAAATAACGCATGTCCAAAGGATGATTTTTCCTTGCCAATTATAGAAATCATGGTAGACGCAACTTCAAGACATGAAGCTTTGTCTTTCATGGATGTGTCATCA
GGATATAATCATATTCGAATGGGTCTTGAGGATTAA
Protein sequenceShow/hide protein sequence
MVTGVDTSENRMTELEKKVNILMKALEERDYEIKSLKNQIESRDATESSHTNTVKNADKGKAIMQESQPQNSTSIASLFVQPLQEMIANSIKTQYGGPTQIFSLYSKPYT
KRIDNLRMLNGWEQLERDFLNRFYSTRRIVGMIELTATKQRMSEPVVDYINRWRALSLDCEDRLTELPTVEMCTQGMHWGLMYILQGIKPRTFEKLATRTHDIELSIANR
GNNDFLVSEIRKEKKEVKSTQKVSKGATKEDMVITTAPLKFISKEKKFEKRQEEDEKRQKKVEDADEGYTLVTHQKNAQLSDDDENEYVSLLKAYKDVFAWSYKEMSRLD
PMVVVHHLVIKLEHRLVKQAQRQFRSKLISQIEEEVNKLIEAGFIREVKCPIWIANIVPVRKKNGKLRVCVDFHNLNNACPKDDFSLPIIEIMVDATSRHEALSFMDVSS
GYNHIRMGLED