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CSPI01G21790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G21790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING/FYVE/PHD-type zinc finger family protein isoform 1
Genome locationChr1:17349461..17350341
RNA-Seq ExpressionCSPI01G21790
SyntenyCSPI01G21790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY27907.1 Uncharacterized protein TCM_029626 [Theobroma cacao]4.1e-1549.53Show/hide
Query:  MERRSSHLSSPLSI-FLISFLFFFFISCNALSPDR---KFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLP
        M   SS LS+   I FL+        S ++ SPD    K  S S YRTL  LQR    QI +CGE +S  QC Q PKCRWC S+ +D+ CF++AEA RLP
Subjt:  MERRSSHLSSPLSI-FLISFLFFFFISCNALSPDR---KFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLP

Query:  QQVFSCD
        QQVF CD
Subjt:  QQVFSCD

KAA0044701.1 hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa]1.3e-3294.59Show/hide
Query:  LSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD
        LSPDRKFNSPSSYRTLS+LQRRRDQQISNCGEKVSA QCSQT KCRWCRSD+IDDTCFTRAEALRLPQQVFSCD
Subjt:  LSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD

KAG6573331.1 hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3579.41Show/hide
Query:  RSSHLSSPLSIFLISFLFFFFI--SCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFS
        RS HL +PLSIFL+SFLFF FI  S NALS  RKFN PSS R L SLQRRRD++I NCGEKVSALQCS+TP CRWCRSD IDDTCF+RAEALRLPQQVFS
Subjt:  RSSHLSSPLSIFLISFLFFFFI--SCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFS

Query:  CD
        CD
Subjt:  CD

OMO65460.1 hypothetical protein COLO4_31211 [Corchorus olitorius]4.6e-1450.56Show/hide
Query:  LISFLFFFFISCNALS-PDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD
        L   LF    + + LS  D +    S +R+L +LQR    QI NCGE +S  QC Q PKCRWCRS+ +DD CF ++EA RLPQQVF CD
Subjt:  LISFLFFFFISCNALS-PDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD

XP_038723734.1 uncharacterized protein LOC120015395 [Tripterygium wilfordii]3.5e-1445.63Show/hide
Query:  SSHLSSPLSIFLISFLFFF-FISCNALSPDRKFNSPSSYRTLSSLQRR---RDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVF
        S  LS  L + L+ F F +   S + ++     +S +SYR++ + QRR     +QI +CG+ VS   CSQ P+CRWCRSD +DD CF++ EA RLPQQVF
Subjt:  SSHLSSPLSIFLISFLFFF-FISCNALSPDRKFNSPSSYRTLSSLQRR---RDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVF

Query:  SCD
        +CD
Subjt:  SCD

TrEMBL top hitse value%identityAlignment
A0A061GFG8 Uncharacterized protein2.0e-1549.53Show/hide
Query:  MERRSSHLSSPLSI-FLISFLFFFFISCNALSPDR---KFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLP
        M   SS LS+   I FL+        S ++ SPD    K  S S YRTL  LQR    QI +CGE +S  QC Q PKCRWC S+ +D+ CF++AEA RLP
Subjt:  MERRSSHLSSPLSI-FLISFLFFFFISCNALSPDR---KFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLP

Query:  QQVFSCD
        QQVF CD
Subjt:  QQVFSCD

A0A067JNS3 Uncharacterized protein8.4e-1448.35Show/hide
Query:  SIFLISFLFFFFISCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD
        SIFLI        S +  S  +  +  +S+R+L + QR   QQI NC   V+  QCSQ PKCRWC+S+ +DD CF++ EA RLPQQVF CD
Subjt:  SIFLISFLFFFFISCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD

A0A0A0LX55 Uncharacterized protein1.7e-51100Show/hide
Query:  MERRSSHLSSPLSIFLISFLFFFFISCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVF
        MERRSSHLSSPLSIFLISFLFFFFISCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVF
Subjt:  MERRSSHLSSPLSIFLISFLFFFFISCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVF

Query:  SCD
        SCD
Subjt:  SCD

A0A1R3H5C1 Uncharacterized protein2.2e-1450.56Show/hide
Query:  LISFLFFFFISCNALS-PDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD
        L   LF    + + LS  D +    S +R+L +LQR    QI NCGE +S  QC Q PKCRWCRS+ +DD CF ++EA RLPQQVF CD
Subjt:  LISFLFFFFISCNALS-PDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD

A0A5A7TT10 Uncharacterized protein6.2e-3394.59Show/hide
Query:  LSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD
        LSPDRKFNSPSSYRTLS+LQRRRDQQISNCGEKVSA QCSQT KCRWCRSD+IDDTCFTRAEALRLPQQVFSCD
Subjt:  LSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAAGAAGTTCCCATCTTTCATCACCGCTCTCCATTTTCCTCATCTCCTTCCTCTTTTTCTTCTTCATTTCATGTAATGCCTTATCCCCAGATCGCAAATTCAA
CTCCCCCAGTTCTTATCGTACTTTATCGAGCTTACAGAGAAGGAGAGATCAACAGATCTCTAATTGCGGCGAGAAAGTTTCGGCTTTACAGTGTTCCCAGACCCCCAAAT
GCCGGTGGTGCCGGAGTGATATCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCCTGTGATTGA
mRNA sequenceShow/hide mRNA sequence
TTTAAAAAGTTTAAGGTGAGAGTGGTATGTGACTGTATCGAGTCTCTTTTTAGTTCAAGTGGACTTTGAAAAAGGTATGGATGTATCTGATGCTAAAATTTTACTATTCA
AAAAAGATTTTAGAAAAGCATCTCATTTTATTATAATTAAAGGGAAGAGAAACAAAATTGAATAGCCAAACTCAGAACTTTGTGGAGACATTAGAAGATGCTCTAAAGCA
CCCACCCAGCTTTGAGTTCTGTAAATTTGTAGCTTTGGGATCTAATTTTCGACAACTTTTCTTCAAATTTCCATGGAAAGAAGAAGTTCCCATCTTTCATCACCGCTCTC
CATTTTCCTCATCTCCTTCCTCTTTTTCTTCTTCATTTCATGTAATGCCTTATCCCCAGATCGCAAATTCAACTCCCCCAGTTCTTATCGTACTTTATCGAGCTTACAGA
GAAGGAGAGATCAACAGATCTCTAATTGCGGCGAGAAAGTTTCGGCTTTACAGTGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGTGATATCATCGACGATACCTGC
TTCACCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCCTGTGATTGAATTTCCTCATTGTATCTCTAATTTTTTCTTCAGATCTATTCATTTCCGGTTGTGGG
TCATGTGTTTACTTCATATACTTTGATCTCCATGTACATGGCTGCTGGGTGGTTACTGGTTAGGTCTTTCCTTCTAGCCTTGGTTGGGACATTACAATTTTGAAAGATCA
ATACAATGTATTTGTTTGAGTTTATTTTAATCGAACTTGCGGATTGGTTGAGTTTTTAATATGTATCACCGATTACCTTACAGAATGTATTTGAACATTTGGATCGCATG
C
Protein sequenceShow/hide protein sequence
MERRSSHLSSPLSIFLISFLFFFFISCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD