; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G22110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G22110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDUF4228 domain-containing protein
Genome locationChr1:17636449..17637731
RNA-Seq ExpressionCSPI01G22110
SyntenyCSPI01G22110
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583958.1 hypothetical protein SDJN03_19890, partial [Cucurbita argyrosperma subsp. sororia]9.9e-7378.17Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        M+NSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPSSSAA  D ASALPKIVIVPPEADLQRGKIYFLMPLPP+PDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  R-----RRKKR----EYSNNHHRTTTAASTASAVPDT-------TTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        R     RRKKR       NNHH   T  + ASA  D+         N+ISM+NLLVSD YLSEILS+KASTHRERRRGRVGVWRPHL+SICESPSD+
Subjt:  R-----RRKKR----EYSNNHHRTTTAASTASAVPDT-------TTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

KGN65978.2 hypothetical protein Csa_019723 [Cucumis sativus]1.6e-9499.44Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR

Query:  RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRKKREYSNNHHRTTTAASTASAVPDTTTN+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_004150211.1 uncharacterized protein LOC101205379 [Cucumis sativus]1.6e-9499.44Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR

Query:  RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRKKREYSNNHHRTTTAASTASAVPDTTTN+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_008443296.1 PREDICTED: uncharacterized protein LOC103486913 [Cucumis melo]2.0e-8995.63Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SSSAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREYSNNHHRTTTAASTASAVPDTTT--NTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T ASTASAVPDTTT  N ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREYSNNHHRTTTAASTASAVPDTTT--NTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_038894960.1 uncharacterized protein LOC120083324 [Benincasa hispida]4.3e-7685.41Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPL---PPDPD
        MKNSIRCCISCILPCG LDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP SSAAHDAA+A PKIVIVPPEADLQRGKIYFLMPL   PP+PD
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPL---PPDPD

Query:  KPRRRKKREYSN--NHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        KPRRRKKR+ +N  NHH   T A+ ++AVP+   N ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  KPRRRKKREYSN--NHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

TrEMBL top hitse value%identityAlignment
A0A0A0M094 Uncharacterized protein7.6e-9599.44Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR

Query:  RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRKKREYSNNHHRTTTAASTASAVPDTTTN+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A1S3B8G2 uncharacterized protein LOC1034869139.6e-9095.63Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SSSAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREYSNNHHRTTTAASTASAVPDTTT--NTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T ASTASAVPDTTT  N ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREYSNNHHRTTTAASTASAVPDTTT--NTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A5A7UMG1 DUF4228 domain-containing protein9.6e-9095.63Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SSSAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  RRRKKREYSNNHHRTTTAASTASAVPDTTT--NTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T ASTASAVPDTTT  N ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREYSNNHHRTTTAASTASAVPDTTT--NTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A6J1KLR7 rhoGEF domain-containing protein gxcI-like1.7e-7076.88Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP
        M+NSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPSSSAA  D ASALPKIVIVPPEADLQRGKIYFLMPLPP+PDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKP

Query:  R-----RRKKREYSNN-----HHRTTTAASTASAVPDTTTN--------TISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        R     RRKKR  +NN     H   T  A+ ASA  DT  N        +ISM+NL VSD YLSEILS+KASTHRERRRGRVGVWRPHL+SICESPS +
Subjt:  R-----RRKKREYSNN-----HHRTTTAASTASAVPDTTTN--------TISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A6P5WYR0 ELMO domain-containing protein F-like6.3e-5765.08Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
        MKN+IRCCISCILPCGALDVIRI+HSNG VEEI+GSIKAS++MKAHPKHVLKKPSSPS          +PKIVIVPP+A+LQRGKIYFLMP+P  P+K R
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR

Query:  ----------RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSD
                  RR   + SNN++  + + S ++A  +   NTISMTNLL+SD YLSEILS+K ST R+RRRGRVGVWRPHL+SI E+P+D
Subjt:  ----------RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein9.3e-2941.44Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
        M NS+RCC++C+LPCGALD+IRIVH NGYVEEIT SI A ++++A+P HVL KP S            + KI+I+ PE++L+RG IYFL+P    P+K R
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR

Query:  RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKAS--THRERRR----GRVGVWRPHLQSICE
        RRK       + +  +A +    +            + + + YL E++S  ++   HR RRR      V  WRP L SI E
Subjt:  RRKKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKAS--THRERRR----GRVGVWRPHLQSICE

AT1G29195.1 unknown protein7.6e-4755.32Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDP----
        MK +IRCCI+CILPCGALDVIRIVHSNG+VEEI+G+I AS++MKAHPKHVLKKPSSP+S        +  KIVIVPPEA+LQRGKIYFLMP         
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDP----

Query:  -DKPRRR--------KKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE
          K RR         KKR      HR            D          L+ SD YL+EILS+K +T ++RR+GRVGVWRPHL+SI E
Subjt:  -DKPRRR--------KKREYSNNHHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE

AT2G30230.1 unknown protein1.0e-2738.25Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR
        M NS+RCC++C+LPCGALD+IRIVH NG+V+EIT  + A ++++A+P HVL KP S            + KI+I+ PE++L+RG IYFL+P    P+K +
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPR

Query:  RRKKREYSNNHHRTTTA----ASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRR----GRVGVWRPHLQSICE
         +K++E         +     +   S   D   + +++    + D  LSE +S     +R RR+      V  WRPHL SI E
Subjt:  RRKKREYSNNHHRTTTA----ASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRR----GRVGVWRPHLQSICE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATAGCATAAGATGCTGCATATCCTGCATTCTTCCTTGCGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAAATCACCGGCTCCAT
CAAAGCTTCCGATGTCATGAAAGCCCATCCTAAACACGTCCTTAAAAAGCCCTCCTCCCCTTCCTCCTCCGCCGCTCACGACGCCGCCTCTGCCCTCCCCAAGATCGTCA
TCGTCCCACCCGAAGCTGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAGAATATTCCAATAAT
CATCATCGAACAACAACCGCCGCCTCCACCGCCTCCGCCGTACCCGACACCACCACCAACACCATTTCCATGACTAATCTCCTCGTTTCCGATCACTACCTCTCCGAAAT
ACTCTCCGACAAAGCTTCCACCCACCGCGAACGGCGGCGCGGCCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCAGTGATATCTAA
mRNA sequenceShow/hide mRNA sequence
AATATAAACATAAACAAAAAAGTGTAAAAACGTAATTGAAACTTAGAAAGTAAGTCAAAACCTCCTTTCATTCTTGACATTTTCCAAGACAGATGTAGTGTTCGTTGCAA
CCAAAATATAAAACAAAAACCAAATAAAAGAAGAATGAAAAAACGAAAAAACGAAGAGAGATCAAGAAGAAAATGAAGAACAACTACTTTCTCTCTCTCCATCTCTCTCC
CTTCTCTCTTCCTCTCCCATATTTCAATATTTCATTAATCTCTCTCTCCTCCAATACACAAAACAAACTCAAAATTTAAATTTAAAATTTTTTGCTTTCTTTTTCCTTTT
TTTGTATTAAGGCAATGAAAAATAGCATAAGATGCTGCATATCCTGCATTCTTCCTTGCGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAA
ATCACCGGCTCCATCAAAGCTTCCGATGTCATGAAAGCCCATCCTAAACACGTCCTTAAAAAGCCCTCCTCCCCTTCCTCCTCCGCCGCTCACGACGCCGCCTCTGCCCT
CCCCAAGATCGTCATCGTCCCACCCGAAGCTGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAG
AATATTCCAATAATCATCATCGAACAACAACCGCCGCCTCCACCGCCTCCGCCGTACCCGACACCACCACCAACACCATTTCCATGACTAATCTCCTCGTTTCCGATCAC
TACCTCTCCGAAATACTCTCCGACAAAGCTTCCACCCACCGCGAACGGCGGCGCGGCCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCAGTGA
TATCTAAAAAAAAACGGCTATTCAGGTTGTGGGTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTAAACATAAATATATATATCATCATAATTAAATTCCATT
TCTTCTACATATCATGATCGTTCATAAATAAATTTTTTAGCAAAAAACTTTTTTTCTAGAGGGATCTGAATTTTAATTAAGACCTAATGTGGTAATTAAATCTCATTAGT
TACAGATTTATGCTTAATTAATTTCCAGAGTTTTATTTTTTTGAATTTGTGGAGAATTTTGAGTGCTTGTAGAGAGAGAAGTCATGTGTGTATGTGCATGAACATAATTT
TGAGTGATTGTGATATGATGATATGATTGTACAGCCTCCAATTATCTACCTTTCTTTTCTTTTCTTTTCTTTC
Protein sequenceShow/hide protein sequence
MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPPDPDKPRRRKKREYSNN
HHRTTTAASTASAVPDTTTNTISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI