; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G22340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G22340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:17888172..17888971
RNA-Seq ExpressionCSPI01G22340
SyntenyCSPI01G22340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652729.1 hypothetical protein Csa_014074 [Cucumis sativus]4.7e-2588.24Show/hide
Query:  MKNKRRWRSCGSRRRNIDGSSTGDEVSDESAEYFFSHESRQSCGINKALKNLSFDTTAFWWKGRDLPL
        MKNK RWR CG RRR+IDGSS GDEVSD SAEYFFSHESRQSCGINKALKNLSFDTTA WWKG+DLPL
Subjt:  MKNKRRWRSCGSRRRNIDGSSTGDEVSDESAEYFFSHESRQSCGINKALKNLSFDTTAFWWKGRDLPL
TrEMBL top hitse value%identityAlignment
A0A0A0LV64 Uncharacterized protein7.2e-56100Show/hide
Query:  MKNLLQKSIALAKNEQEHTAETPYLSPSRDPISLAHQLKGASMKNKRRWRSCGSRRRNIDGSSTGDEVSDESAEYFFSHESRQSCGINKALKNLSFDTTA
        MKNLLQKSIALAKNEQEHTAETPYLSPSRDPISLAHQLKGASMKNKRRWRSCGSRRRNIDGSSTGDEVSDESAEYFFSHESRQSCGINKALKNLSFDTTA
Subjt:  MKNLLQKSIALAKNEQEHTAETPYLSPSRDPISLAHQLKGASMKNKRRWRSCGSRRRNIDGSSTGDEVSDESAEYFFSHESRQSCGINKALKNLSFDTTA

Query:  FWWKGRDLPL
        FWWKGRDLPL
Subjt:  FWWKGRDLPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATTTATTACAAAAGTCTATAGCTCTTGCAAAAAATGAGCAAGAACACACAGCAGAAACCCCATATCTCTCCCCCAGCAGAGATCCCATATCTCTCGCCCACCA
ATTAAAAGGAGCTTCCATGAAAAATAAGAGGAGGTGGCGGTCGTGCGGGAGTAGGCGGAGGAACATCGACGGTTCTAGCACCGGTGACGAGGTCTCGGATGAGTCTGCAG
AGTATTTCTTCAGCCATGAAAGCCGCCAAAGCTGCGGAATTAACAAGGCTCTCAAAAATTTGAGCTTTGATACGACCGCGTTTTGGTGGAAGGGTAGAGATCTTCCCCTT
TGA
mRNA sequenceShow/hide mRNA sequence
GGAATCAAACCTAAATTAAAATTTATTCATTAATTAACTTTAAGATAAACATAGAAACCAACAAAGCTTCGAGGCATTCTATCCTTAAAAACCAAAGCTTTGAGGTTAAG
TACAATCCACACACCAAATTCATCACTAAAATCACTCTTTTTTTTTTTTCTCTCTTAATTTTATCATCTTGCAATGTAATAGAAAAAACATCTATCTCACCCCAATTTTA
AAGCTTAAGAGAACAGTGAACACACAACCAATTTGAACATAGTTCAACTCGATTATCATAGCATTATAGTCGGAAATTCAAATCTCGTACTCAGAAAAAACACACCAGAA
AATATTTTTAAGAAAGATGAAGAATTTATTACAAAAGTCTATAGCTCTTGCAAAAAATGAGCAAGAACACACAGCAGAAACCCCATATCTCTCCCCCAGCAGAGATCCCA
TATCTCTCGCCCACCAATTAAAAGGAGCTTCCATGAAAAATAAGAGGAGGTGGCGGTCGTGCGGGAGTAGGCGGAGGAACATCGACGGTTCTAGCACCGGTGACGAGGTC
TCGGATGAGTCTGCAGAGTATTTCTTCAGCCATGAAAGCCGCCAAAGCTGCGGAATTAACAAGGCTCTCAAAAATTTGAGCTTTGATACGACCGCGTTTTGGTGGAAGGG
TAGAGATCTTCCCCTTTGAAGATGTGGAAGAAGCTGCTGCCATGGCTGAAGAAGAAGTAAAAAGAGAAGAGCTCGAGAGAAGAAGAAGAAGAAGAGAAGGAGGGAAGAAT
AGAAGGACTCCAAAGATGTGGGGACTTATA
Protein sequenceShow/hide protein sequence
MKNLLQKSIALAKNEQEHTAETPYLSPSRDPISLAHQLKGASMKNKRRWRSCGSRRRNIDGSSTGDEVSDESAEYFFSHESRQSCGINKALKNLSFDTTAFWWKGRDLPL