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CSPI01G22560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G22560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:18143976..18144811
RNA-Seq ExpressionCSPI01G22560
SyntenyCSPI01G22560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583459.1 hypothetical protein SDJN03_19391, partial [Cucurbita argyrosperma subsp. sororia]6.6e-6188.97Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MT+MLTFLFCL+SFTFLSIA+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ P+ KDPCG SKCSPLPLAAQVQSTPAKESKYSTTIQ   HRVGAGGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPS
        GIVFGITFAV L MGVYYVLRTRQANANRA++AQPS
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPS
KAG7019217.1 hypothetical protein SDJN02_18175, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6189.71Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MT+MLTFLFCL+SFTFLSIA+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ P+ KDPCG SKCSPLPLAAQVQSTPAKESKYSTTIQ   HRVGAGGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPS
        GIVFGITFAVFL MGVYYVLRTRQANANRA++AQPS
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPS
XP_008457527.1 PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]7.5e-6593.48Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MTRMLTFLFCL+SFTFLS+ARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNP+GKDPCGDSKCSPLPLAAQVQSTPA+ESKYSTTIQ+S HRVGAGGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
        GIVFGITFAVFL MGVYYVLRTRQANANRA+ AAQPSA
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
XP_011657962.2 uncharacterized protein LOC105435923 [Cucumis sativus]8.0e-6797.1Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MTRMLTFLFCLASFTFLSIA+ADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQ+SNHRVGAGGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
        GIVFGITFAVFLTMGVYYVLRTRQANANRA+ AAQPSA
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
XP_038876402.1 uncharacterized protein LOC120068840 [Benincasa hispida]2.5e-6091.6Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MTRMLTFLFCL SFTFLSIARA GRAPHGLVYESPVAFSPMAYDFFHPSTQNP+GKD CG+SKCSPLPLAAQVQSTPA+ESKYSTTIQ  NHRVGAGGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI
        GIVFGITFAVFL MGVYYVL TRQANANRA+
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI
TrEMBL top hitse value%identityAlignment
A0A0A0LV85 Uncharacterized protein6.0e-6898.55Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
        GIVFGITFAVFLTMGVYYVLRTRQANANRA+ AAQPSA
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
A0A1S3C6E2 uncharacterized protein LOC1034971983.6e-6593.48Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MTRMLTFLFCL+SFTFLS+ARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNP+GKDPCGDSKCSPLPLAAQVQSTPA+ESKYSTTIQ+S HRVGAGGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
        GIVFGITFAVFL MGVYYVLRTRQANANRA+ AAQPSA
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
A0A5A7SXJ1 Uncharacterized protein3.6e-6593.48Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MTRMLTFLFCL+SFTFLS+ARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNP+GKDPCGDSKCSPLPLAAQVQSTPA+ESKYSTTIQ+S HRVGAGGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
        GIVFGITFAVFL MGVYYVLRTRQANANRA+ AAQPSA
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAI-AAQPSA
A0A6J1DWP3 uncharacterized protein LOC1110250997.6e-5578.83Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        MT+MLTFLFCL+S TFLS+ARA+GRAPHGLVYESP+AFSPMAYDFFHPS QN + KDPC  SKCSPLPLAAQVQSTPA++SKYST +Q   H +GAGG+L
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPSA
        GIV GI FAVFL MGVYYVLRTRQANANRA++ QP A
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPSA
A0A6J1GD80 uncharacterized protein LOC1114528842.8e-4975.18Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL
        M + LTFLF L+SF+FLSI RA+GRAPHGLVYE+PVAFSPMAYDFFHP T++P+ +DPCG SKCSPLPLAAQ+QS PA+ESKYSTT Q      G GGIL
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGIL

Query:  GIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPSA
        GIVFGITFAVFL MGVYYVLRTR AN NRA++A+P A
Subjt:  GIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28410.1 unknown protein3.5e-2045.22Show/hide
Query:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGK-DPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVG--AG
        MT     +F  +S    + A A  RAPHGL YE+PVAFSP A+DFFH   +NP    +PC +S CSPLP+AA+VQ   AK  +      S+  R G    
Subjt:  MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGK-DPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVG--AG

Query:  GILGIVFGITFAVFL
        G++GI+FG+ FAV +
Subjt:  GILGIVFGITFAVFL
AT5G60650.1 unknown protein2.0e-1536.3Show/hide
Query:  MTRMLTFLF-CLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHP----STQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYS----TTIQSSN
        +T  L F F CL+    +SI  A  R  HG  Y +P AFSP AYDFFHP    S  N   K        SP P    +    ++ SK S    TT +S  
Subjt:  MTRMLTFLF-CLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHP----STQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYS----TTIQSSN

Query:  HRVGAGGILGIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPSA
           G G  +G+V G++F  FL++G+Y+V++ ++AN  R I     A
Subjt:  HRVGAGGILGIVFGITFAVFLTMGVYYVLRTRQANANRAIAAQPSA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGAATGCTTACTTTCCTGTTCTGTCTCGCTTCCTTCACATTTCTTTCCATTGCCCGAGCTGACGGCAGAGCTCCTCATGGCTTGGTATATGAGAGCCCGGTGGC
CTTTTCTCCAATGGCATATGATTTCTTCCATCCAAGCACTCAGAATCCCAGTGGGAAAGACCCATGTGGTGATTCCAAATGTTCCCCCCTTCCCCTTGCGGCACAAGTGC
AATCCACCCCTGCAAAAGAAAGCAAATACTCCACAACGATCCAGAGCAGTAACCACCGCGTGGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTG
TTTTTGACAATGGGAGTGTACTATGTTCTACGTACACGCCAAGCCAATGCAAACCGAGCTATTGCTGCACAACCTAGCGCTTGA
mRNA sequenceShow/hide mRNA sequence
CAACTTTCCTCTCCTGCTTCTGCTTCTATTTCAAGGCTCTTGGTTGAGGCAAATCGACAAACATGACTCGAATGCTTACTTTCCTGTTCTGTCTCGCTTCCTTCACATTT
CTTTCCATTGCCCGAGCTGACGGCAGAGCTCCTCATGGCTTGGTATATGAGAGCCCGGTGGCCTTTTCTCCAATGGCATATGATTTCTTCCATCCAAGCACTCAGAATCC
CAGTGGGAAAGACCCATGTGGTGATTCCAAATGTTCCCCCCTTCCCCTTGCGGCACAAGTGCAATCCACCCCTGCAAAAGAAAGCAAATACTCCACAACGATCCAGAGCA
GTAACCACCGCGTGGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTGTTTTTGACAATGGGAGTGTACTATGTTCTACGTACACGCCAAGCCAAT
GCAAACCGAGCTATTGCTGCACAACCTAGCGCTTGACATGGGCAAAGCCAACATGTTTATCAGATTAGACAAACACTTCGGCACTTCACTTCTCTTCCTTTGTGTAATTC
TTCACTCTTTCTTGCCATGGCTTTACATATTTATTGTTCTGTTATAGAAGTAGGAGGCTAATCTAAAGCTATCATCAAAATTTCCCTAAACTTTTCATCTTCATCCCTCC
TCTCCCTCAGTGTGTAAAATCAAGTTTGTAAAATTTTTGCCCCCTTGGAGTTTCTAGATTTGCTCCTACTAATATAGCATGCAACAAATGTCAAAGAAAATCCACAATTT
TGCATTGAGAGCTTTGAGAAATTAAAGCACATTCAATCAACACTGCCAAAGAATAATCAAATGAAG
Protein sequenceShow/hide protein sequence
MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCGDSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGILGIVFGITFAV
FLTMGVYYVLRTRQANANRAIAAQPSA