| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043826.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 2.0e-290 | 71.05 | Show/hide |
Query: MDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGRSEKKSWKGKE
MDQSK LEENL+EFQKI+VDLNNIGEKMSDENQA VKAAIKYGRDSLTMS+VLDALKTR+LEIKKE KD ELLM RGRSEKKSWKGKE
Subjt: MDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGRSEKKSWKGKE
Query: KSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV-------------------------------------------------
+S ++ G ++ TS ANV DGY+SAE+
Subjt: KSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV-------------------------------------------------
Query: ----------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAI
+ G GS+QIATHDGM+R+ TNV YVP+LKRNLIS+G+LDRSG T KSENGVMKVTKGSLVKL+GTLR+GL+VLEGTTVS SAAI
Subjt: ----------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAI
Query: ASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYFLSIIDDFSR-
AS KVTDMSMLWHKRLAHVSERGLQALSQQGLL GVK+VELPFCEHCIM KSTRV+FGKGKH T GILDYVHSDLWGP K SM GSRYF+SIIDDFSR
Subjt: ASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYFLSIIDDFSR-
Query: -------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
KKQVENQTGRKVKYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: -------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTFNETEMSYCVI
AQT CYLINRS STAL+LKTPQEVWTGKAPSL+HLR FGC+ YAHVKDGKLNKR LKC+FIGYPQGVKGYKLWC+EKG+NKCII DVTFNETEM YCV
Subjt: AQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTFNETEMSYCVI
Query: EQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQAPIRYGYADL
EQQKQ+ DHV TEVR+ SE+RPS+ LD +Q PLVS+ E T Q E DGIQSQQERILIDEG E+SSSNN+LQNYQLTRDRVQRER APIRYGYADL
Subjt: EQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQAPIRYGYADL
Query: VAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
VAYALTCAA+SIEAE LTFEEAIVSDSKKQWKDAME ELFSL KNQTWSLVPKPPNQKLI
Subjt: VAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
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| KAA0045141.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-285 | 67.94 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
M STRFEV+KF+ GDFALWRKKIR ILVQ KVAKILDEE LPE I ESEK+DMDEM YSTILLYL D+V RLVD+ATTTG LWKKLESLYLTKSLPNK+
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
Query: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQAVKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGRSEKKSWKGKEKSS
Y+KEKFFG KMDQSK LEENL+EFQKIIVDLNNI VLDALKTR+LEIKKE KD+ELLM RGRSEKKS KGKE+SS
Subjt: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQAVKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGRSEKKSWKGKEKSS
Query: SKEASGSQYGPGETSSANVIDGYDSAEV----------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENG
+ ++ +SA ++DGYDS E + G GS+QIATHDGM+R+ TNVRYVP+L RNLIS+G+LDRSG T KSEN
Subjt: SKEASGSQYGPGETSSANVIDGYDSAEV----------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENG
Query: VMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNG
VMKVTKGSLVKLRGTLR+GL+VLE T VS SAAIAS KVTDM MLWHKRLAHVSERGLQALSQQGLL GVK+VEL FCEHCIM KSTRV+FGKGKHT G
Subjt: VMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNG
Query: ILDYVHSDLWGPMKVPSMEGSRYFLSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTP
ILDYVHSDLWG MK SM G RYF+SIIDDFSR KKQVE QTGRK+KYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTP
Subjt: ILDYVHSDLWGPMKVPSMEGSRYFLSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTP
Query: QQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQG
QQNGLAERFN+TIME TRCLLTNASLPLKFWGEAAQT CYLINRS S AL+LKTP EVW GKAPSLDHL FGC+TY HVKDGKLNKR LKCMFIGYPQG
Subjt: QQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQG
Query: VKGYKLWCLEKGINKCIIGIDVTFNETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHS
VKGYKLWCLEKG+ KCII DVTFNETEM YCV EQQKQ+ DH
Subjt: VKGYKLWCLEKGINKCIIGIDVTFNETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHS
Query: EKSSSNNNLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVP
LTRDR QRER APIRYGYADLVAYALTCA + IEAE LTFEEAIVSDSKKQWKDAMEAELFSL KNQTWSLVP
Subjt: EKSSSNNNLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVP
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| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 0.0e+00 | 72.53 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
M STRFEV+KF+ GDFALWRKKIRAILVQ KVAKILDEE LP+ I ESEK+DMDEM Y TILLYL D+V RLVDEATTTG LWKKLESLYLTKSLPNK+
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
Query: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Y+KEKFFGYKMDQSK LEENL+EFQKI+VDLNNIGEKMSDENQA VKAAIKYG DSLTMS+VLDALKTR+LEIKKE KD ELLM RGR
Subjt: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Query: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
SEKKSWKGKE+S ++ G ++ TS ANV DGY+SAE+
Subjt: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
Query: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
+ G GS+QIATHDGM+R+ TNVRYVP+LKRNLIS+G+LDRSG T KSENGVMKVTKGSLVKLRGTLR+GL+VLE
Subjt: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
Query: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
GTTVS SAAIAS KVT+MSMLWHKRLAHVSERGLQALSQQGLL GVK+VELPFCEHCIM KSTRV+FGKGKHTT GILDY+HSDLWGP K SM GSRYF
Subjt: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
Query: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
+SIIDDFSR KKQVENQTGRKVKYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Subjt: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Query: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
SLPLKFWGEAAQT CYLINRS STAL+LKTPQEVWTGKAPSL+HLR FGC+ YAHVKDGKLNKR LKCMFIGYPQGVKGYKLWC+EKG+NKCII DVTF
Subjt: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
Query: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
NETEM YCV EQQKQ+ DHV TEVR+ SE+RPS+ LD +Q PLVS+ E T Q E DGIQSQQERILIDE E+SSSNN+LQNYQLTRDRVQRER
Subjt: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
Query: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
APIRYGYADLVAYALTCAA+SIEAE LTFEEAIVSDSKKQWKDAME ELFSL KNQTWSLVPKPPNQKLI
Subjt: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0e+00 | 72.87 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
M STRFEV+KF+ GDF+LWRKKIRAILVQ KVAKILDEE LP+ I ESEK+DMDEM YSTILLYL D+V RLVDEATTTG LWKKLESLYLTKSL NK+
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
Query: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Y+KEKFFGYKMDQSK LEENL+EFQKI+VDLNNIGEKMSDENQA VKAAIKYGRDSLTMS+VLDALKTR+LEIKKE KD ELLM RGR
Subjt: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Query: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
SEKKSWKGKE+S ++ G ++ TS ANV DGY+SAE+
Subjt: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
Query: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
+ G GS+QIATHDGM+R+ TNVRYVP+LKRNLIS+G+LDRSG T KSENGVMKVTKGSLVKLRGTLR+GL+VLE
Subjt: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
Query: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
GTTVS SAAIAS KVTDMSMLWHKRLAHVSERGLQALSQQGLL GVK+VELPFCEHCIM KSTRV+FGKGKHTT GILDYVHSDLWGP K SM GSRYF
Subjt: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
Query: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
+SIIDDFSR KKQVENQTGRKVKYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Subjt: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Query: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
SLPLKFWGEAAQT CYLINRS STAL+LKTPQEVWTGKAPSL+HLR FGC+ YAHVKDGKLNKR LKCMFIGYPQGVKGYKLWC+EKG+NKCII DVTF
Subjt: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
Query: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
NETEM YCV EQQKQ+ DHV TEVR+ SE+RPS+ LD +Q PLVS+ E T Q E DGIQSQQERILIDEG E+SSSNN+LQNYQLTRDRVQRER
Subjt: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
Query: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
APIRYGYADLVAYALTCAA+SIEAE LTFEEAIVSDSKKQWKDAME ELFSL KNQTWSLVPKPPNQKLI
Subjt: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0e+00 | 73.1 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
M STRFEV+KF+ GDFALWRKKIRAILVQ KVAKILDEE LP+ I ESEK+DMDEM YSTILLYL D+V RLVDEATTTG LWKKLESLYLTKSLPNK+
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
Query: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Y+KEKFFGYKMDQSK LEENL+EFQKI+VDLNNIGEKMSDENQA VKAAIKYGRDSLTMS+VLDALKTR+LEIKKE KD ELLM RGR
Subjt: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Query: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
SEKKSWKGKE+S ++ G ++ TS ANV DGY+SAE+
Subjt: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
Query: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
+ G GS+QIATHDGM+R+ TNVRYVP+LKRNLIS+G+LDRSG T KSENGVMKVTKGSLVKLRGTLR+GL+VLE
Subjt: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
Query: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
GTTVS SAAIAS KVTDMSMLWHKRLAHVSERGLQALSQQGLL GVK+VELPFCEHCIM KSTRV+FGKGKHTT GILDYVHSDLWGP K SM GSRYF
Subjt: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
Query: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
+SIIDDFSR KKQVENQTGRKVKYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Subjt: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Query: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
SLPLKFWGEAAQT CYLINRS STAL+LKTPQEVWTGKAPSL+HLR FGC+ YAHVKDGKLNKR LKCMFIGYPQGVKGYKLWC+EKG+NKCII DVTF
Subjt: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
Query: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
NETEM YCV EQQKQ+ DHV TEVR+ SE+RPS+ LD +Q PLVS+ E T Q E DGIQSQQERILIDEG E+SSSNN+LQNYQLTRDRVQRER
Subjt: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
Query: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
APIRYGYADLVAYALTCAA+SIEAE LTFEEAIVSDSKKQWKDAME ELFSL KNQTWSLVPKPPNQKLI
Subjt: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7TP18 Putative gag-pol polyprotein | 9.8e-291 | 71.05 | Show/hide |
Query: MDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGRSEKKSWKGKE
MDQSK LEENL+EFQKI+VDLNNIGEKMSDENQA VKAAIKYGRDSLTMS+VLDALKTR+LEIKKE KD ELLM RGRSEKKSWKGKE
Subjt: MDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGRSEKKSWKGKE
Query: KSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV-------------------------------------------------
+S ++ G ++ TS ANV DGY+SAE+
Subjt: KSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV-------------------------------------------------
Query: ----------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAI
+ G GS+QIATHDGM+R+ TNV YVP+LKRNLIS+G+LDRSG T KSENGVMKVTKGSLVKL+GTLR+GL+VLEGTTVS SAAI
Subjt: ----------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAI
Query: ASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYFLSIIDDFSR-
AS KVTDMSMLWHKRLAHVSERGLQALSQQGLL GVK+VELPFCEHCIM KSTRV+FGKGKH T GILDYVHSDLWGP K SM GSRYF+SIIDDFSR
Subjt: ASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYFLSIIDDFSR-
Query: -------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
KKQVENQTGRKVKYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: -------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTFNETEMSYCVI
AQT CYLINRS STAL+LKTPQEVWTGKAPSL+HLR FGC+ YAHVKDGKLNKR LKC+FIGYPQGVKGYKLWC+EKG+NKCII DVTFNETEM YCV
Subjt: AQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTFNETEMSYCVI
Query: EQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQAPIRYGYADL
EQQKQ+ DHV TEVR+ SE+RPS+ LD +Q PLVS+ E T Q E DGIQSQQERILIDEG E+SSSNN+LQNYQLTRDRVQRER APIRYGYADL
Subjt: EQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQAPIRYGYADL
Query: VAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
VAYALTCAA+SIEAE LTFEEAIVSDSKKQWKDAME ELFSL KNQTWSLVPKPPNQKLI
Subjt: VAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
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| A0A5A7TUE4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.6e-286 | 67.94 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
M STRFEV+KF+ GDFALWRKKIR ILVQ KVAKILDEE LPE I ESEK+DMDEM YSTILLYL D+V RLVD+ATTTG LWKKLESLYLTKSLPNK+
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
Query: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQAVKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGRSEKKSWKGKEKSS
Y+KEKFFG KMDQSK LEENL+EFQKIIVDLNNI VLDALKTR+LEIKKE KD+ELLM RGRSEKKS KGKE+SS
Subjt: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQAVKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGRSEKKSWKGKEKSS
Query: SKEASGSQYGPGETSSANVIDGYDSAEV----------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENG
+ ++ +SA ++DGYDS E + G GS+QIATHDGM+R+ TNVRYVP+L RNLIS+G+LDRSG T KSEN
Subjt: SKEASGSQYGPGETSSANVIDGYDSAEV----------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENG
Query: VMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNG
VMKVTKGSLVKLRGTLR+GL+VLE T VS SAAIAS KVTDM MLWHKRLAHVSERGLQALSQQGLL GVK+VEL FCEHCIM KSTRV+FGKGKHT G
Subjt: VMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNG
Query: ILDYVHSDLWGPMKVPSMEGSRYFLSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTP
ILDYVHSDLWG MK SM G RYF+SIIDDFSR KKQVE QTGRK+KYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTP
Subjt: ILDYVHSDLWGPMKVPSMEGSRYFLSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTP
Query: QQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQG
QQNGLAERFN+TIME TRCLLTNASLPLKFWGEAAQT CYLINRS S AL+LKTP EVW GKAPSLDHL FGC+TY HVKDGKLNKR LKCMFIGYPQG
Subjt: QQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQG
Query: VKGYKLWCLEKGINKCIIGIDVTFNETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHS
VKGYKLWCLEKG+ KCII DVTFNETEM YCV EQQKQ+ DH
Subjt: VKGYKLWCLEKGINKCIIGIDVTFNETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHS
Query: EKSSSNNNLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVP
LTRDR QRER APIRYGYADLVAYALTCA + IEAE LTFEEAIVSDSKKQWKDAMEAELFSL KNQTWSLVP
Subjt: EKSSSNNNLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVP
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 0.0e+00 | 72.53 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
M STRFEV+KF+ GDFALWRKKIRAILVQ KVAKILDEE LP+ I ESEK+DMDEM Y TILLYL D+V RLVDEATTTG LWKKLESLYLTKSLPNK+
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
Query: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Y+KEKFFGYKMDQSK LEENL+EFQKI+VDLNNIGEKMSDENQA VKAAIKYG DSLTMS+VLDALKTR+LEIKKE KD ELLM RGR
Subjt: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Query: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
SEKKSWKGKE+S ++ G ++ TS ANV DGY+SAE+
Subjt: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
Query: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
+ G GS+QIATHDGM+R+ TNVRYVP+LKRNLIS+G+LDRSG T KSENGVMKVTKGSLVKLRGTLR+GL+VLE
Subjt: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
Query: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
GTTVS SAAIAS KVT+MSMLWHKRLAHVSERGLQALSQQGLL GVK+VELPFCEHCIM KSTRV+FGKGKHTT GILDY+HSDLWGP K SM GSRYF
Subjt: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
Query: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
+SIIDDFSR KKQVENQTGRKVKYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Subjt: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Query: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
SLPLKFWGEAAQT CYLINRS STAL+LKTPQEVWTGKAPSL+HLR FGC+ YAHVKDGKLNKR LKCMFIGYPQGVKGYKLWC+EKG+NKCII DVTF
Subjt: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
Query: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
NETEM YCV EQQKQ+ DHV TEVR+ SE+RPS+ LD +Q PLVS+ E T Q E DGIQSQQERILIDE E+SSSNN+LQNYQLTRDRVQRER
Subjt: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
Query: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
APIRYGYADLVAYALTCAA+SIEAE LTFEEAIVSDSKKQWKDAME ELFSL KNQTWSLVPKPPNQKLI
Subjt: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
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| A0A5A7UB25 Putative gag-pol polyprotein | 0.0e+00 | 72.87 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
M STRFEV+KF+ GDF+LWRKKIRAILVQ KVAKILDEE LP+ I ESEK+DMDEM YSTILLYL D+V RLVDEATTTG LWKKLESLYLTKSL NK+
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
Query: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Y+KEKFFGYKMDQSK LEENL+EFQKI+VDLNNIGEKMSDENQA VKAAIKYGRDSLTMS+VLDALKTR+LEIKKE KD ELLM RGR
Subjt: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Query: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
SEKKSWKGKE+S ++ G ++ TS ANV DGY+SAE+
Subjt: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
Query: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
+ G GS+QIATHDGM+R+ TNVRYVP+LKRNLIS+G+LDRSG T KSENGVMKVTKGSLVKLRGTLR+GL+VLE
Subjt: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
Query: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
GTTVS SAAIAS KVTDMSMLWHKRLAHVSERGLQALSQQGLL GVK+VELPFCEHCIM KSTRV+FGKGKHTT GILDYVHSDLWGP K SM GSRYF
Subjt: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
Query: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
+SIIDDFSR KKQVENQTGRKVKYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Subjt: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Query: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
SLPLKFWGEAAQT CYLINRS STAL+LKTPQEVWTGKAPSL+HLR FGC+ YAHVKDGKLNKR LKCMFIGYPQGVKGYKLWC+EKG+NKCII DVTF
Subjt: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
Query: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
NETEM YCV EQQKQ+ DHV TEVR+ SE+RPS+ LD +Q PLVS+ E T Q E DGIQSQQERILIDEG E+SSSNN+LQNYQLTRDRVQRER
Subjt: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
Query: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
APIRYGYADLVAYALTCAA+SIEAE LTFEEAIVSDSKKQWKDAME ELFSL KNQTWSLVPKPPNQKLI
Subjt: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
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| A0A5D3DNU1 Putative gag-pol polyprotein | 0.0e+00 | 73.1 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
M STRFEV+KF+ GDFALWRKKIRAILVQ KVAKILDEE LP+ I ESEK+DMDEM YSTILLYL D+V RLVDEATTTG LWKKLESLYLTKSLPNK+
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKL
Query: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Y+KEKFFGYKMDQSK LEENL+EFQKI+VDLNNIGEKMSDENQA VKAAIKYGRDSLTMS+VLDALKTR+LEIKKE KD ELLM RGR
Subjt: YLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQA-------------VKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMVRGR
Query: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
SEKKSWKGKE+S ++ G ++ TS ANV DGY+SAE+
Subjt: SEKKSWKGKEKSSSKEASG--------------------SQYGPGETSSANVIDGYDSAEV---------------------------------------
Query: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
+ G GS+QIATHDGM+R+ TNVRYVP+LKRNLIS+G+LDRSG T KSENGVMKVTKGSLVKLRGTLR+GL+VLE
Subjt: --------------------------LMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLE
Query: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
GTTVS SAAIAS KVTDMSMLWHKRLAHVSERGLQALSQQGLL GVK+VELPFCEHCIM KSTRV+FGKGKHTT GILDYVHSDLWGP K SM GSRYF
Subjt: GTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYF
Query: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
+SIIDDFSR KKQVENQTGRKVKYLRTDNGLEFVNNKFN FCKS+GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Subjt: LSIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Query: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
SLPLKFWGEAAQT CYLINRS STAL+LKTPQEVWTGKAPSL+HLR FGC+ YAHVKDGKLNKR LKCMFIGYPQGVKGYKLWC+EKG+NKCII DVTF
Subjt: SLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
Query: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
NETEM YCV EQQKQ+ DHV TEVR+ SE+RPS+ LD +Q PLVS+ E T Q E DGIQSQQERILIDEG E+SSSNN+LQNYQLTRDRVQRER
Subjt: NETEMSYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQLTRDRVQRERQ
Query: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
APIRYGYADLVAYALTCAA+SIEAE LTFEEAIVSDSKKQWKDAME ELFSL KNQTWSLVPKPPNQKLI
Subjt: APIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQKLI
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 8.8e-55 | 25.88 | Show/hide |
Query: FALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKLYLKEKFFGYKMDQSKG
+A+W+ +IRA+L +Q V K++D +P + +S KK + STI+ YL D T + + L+++Y KSL ++L L+++ K+
Subjt: FALWRKKIRAILVQQKVAKILDEENLPETIAESEKKDMDEMVYSTILLYLPDDVFRLVDEATTTGVLWKKLESLYLTKSLPNKLYLKEKFFGYKMDQSKG
Query: LEENLNEFQKIIVDLNNIGEKMSDENQ--------------AVKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKD------------------EELLMV
L + + F ++I +L G K+ + ++ + A ++LT++ V + L + ++IK +H D L
Subjt: LEENLNEFQKIIVDLNNIGEKMSDENQ--------------AVKAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKD------------------EELLMV
Query: RGRSEKKSWKG------------------------------KEKSSSKE-----ASGSQYGPGETSSANVIDG--------------------YDSAEVL
R KK +KG K K + K+ + G + E ++ +V+D DS EV+
Subjt: RGRSEKKSWKG------------------------------KEKSSSKE-----ASGSQYGPGETSSANVIDG--------------------YDSAEVL
Query: MGI-------GSIQIATHDGMIRV-------FTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGT-LRNGLHVLEGTTVSDSAAIAS
+ G AT G++R+ +V + E NL+S+ L +G + + + + ++K L+ ++ + + N + V+ S +A
Subjt: MGI-------GSIQIATHDGMIRV-------FTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGT-LRNGLHVLEGTTVSDSAAIAS
Query: DKVTDMSMLWHKRLAHVSERGL------QALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTN--GILDYVHSDLWGPMKVPSMEGSRYFLSII
K + LWH+R H+S+ L S Q LL + ++ CE C+ K R+ F + K T+ L VHSD+ GP+ +++ YF+ +
Subjt: DKVTDMSMLWHKRLAHVSERGL------QALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTN--GILDYVHSDLWGPMKVPSMEGSRYFLSII
Query: DDFSR---------KKQV-----------ENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPL
D F+ K V E KV YL DNG E+++N+ FC KGI+ H TV +TPQ NG++ER RTI E+ R +++ A L
Subjt: DDFSR---------KKQV-----------ENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPL
Query: KFWGEAAQTVCYLINRSHSTAL--DLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKD--GKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
FWGEA T YLINR S AL KTP E+W K P L HLR FG + Y H+K+ GK + + K +F+GY G+KLW + K I+ DV
Subjt: KFWGEAAQTVCYLINRSHSTAL--DLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKD--GKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVTF
Query: NETEM-SYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEG--VHSEKSSSNNNLQNYQLTRD
+ET M + ++ + + D E+E ++ P+ + + P S+ QF D +S+ + D + +E + + N Q +D
Subjt: NETEM-SYCVIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEG--VHSEKSSSNNNLQNYQLTRD
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.3e-105 | 32.88 | Show/hide |
Query: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILD-EENLPETIAESEKKDMDEMVYSTILLYLPDDVF-RLVDEATTTGVLWKKLESLYLTKSLPN
M+ ++EVAKF+ F+ W++++R +L+QQ + K+LD + P+T+ + D+DE S I L+L DDV ++DE T G+ W +LESLY++K+L N
Subjt: MTSTRFEVAKFDDMGDFALWRKKIRAILVQQKVAKILD-EENLPETIAESEKKDMDEMVYSTILLYLPDDVF-RLVDEATTTGVLWKKLESLYLTKSLPN
Query: KLYLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQAV-------------KAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMV-
KLYLK++ + M + +LN F +I L N+G K+ +E++A+ I +G+ ++ + V AL KK + L+
Subjt: KLYLKEKFFGYKMDQSKGLEENLNEFQKIIVDLNNIGEKMSDENQAV-------------KAAIKYGRDSLTMSVVLDALKTRSLEIKKEHKDEELLMV-
Query: -RGRSEKKS--------WKGKEKSSSKEASGSQY-----------------GPGETS-----------------------------------SANVID--
RGRS ++S +GK K+ SK + Y G GETS S V+D
Subjt: -RGRSEKKS--------WKGKEKSSSKEASGSQY-----------------GPGETS-----------------------------------SANVID--
Query: -------------------------GYDSAEVLMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRN
G S + GIG I I T+ G V +VR+VP+L+ NLIS LDR GY N ++TKGSLV +G R
Subjt: -------------------------GYDSAEVLMGIGSIQIATHDGMIRVFTNVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRN
Query: GLHVLEGTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSM
L+ A D+++ LWHKR+ H+SE+GLQ L+++ L+ K + C++C+ K RV F ILD V+SD+ GPM++ SM
Subjt: GLHVLEGTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSM
Query: EGSRYFLSIIDDFSRK--------------------KQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTR
G++YF++ IDD SRK VE +TGRK+K LR+DNG E+ + +F +C S GI TV TPQ NG+AER NRTI+E+ R
Subjt: EGSRYFLSIIDDFSRK--------------------KQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTR
Query: CLLTNASLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHV---KDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINK
+L A LP FWGEA QT CYLINRS S L + P+ VWT K S HL+ FGC +AHV + KL+ + + C+FIGY GY+LW K K
Subjt: CLLTNASLPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHV---KDGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINK
Query: CIIGIDVTFNETEMSYC--VIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQ
I DV F E+E+ + E+ K I+ + T PS + +S +S + E + Q E G +Q L DEGV + + Q+
Subjt: CIIGIDVTFNETEMSYC--VIEQQKQKIVDHVETEVRVDSEIRPSVGLDVSSDQSPLVSQTEATHQFESDGIQSQQERILIDEGVHSEKSSSNNNLQNYQ
Query: LTRDRVQRERQAPIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQK
L R +R R RY + V S + E + +E + K Q AM+ E+ SLQKN T+ LV P ++
Subjt: LTRDRVQRERQAPIRYGYADLVAYALTCAANSIEAEALTFEEAIVSDSKKQWKDAMEAELFSLQKNQTWSLVPKPPNQK
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 6.8e-23 | 45.3 | Show/hide |
Query: GVMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTN
GV+KV KG L+G + L++L+G+ + + +A + D + LWH RLAH+S+RG++ L ++G L K L FCE CI K+ RV F G+HTT
Subjt: GVMKVTKGSLVKLRGTLRNGLHVLEGTTVSDSAAIASDKVTDMSMLWHKRLAHVSERGLQALSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTN
Query: GILDYVHSDLWGPMKVP
LDYVHSDLWG VP
Subjt: GILDYVHSDLWGPMKVP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.8e-32 | 27.54 | Show/hide |
Query: EVLMGIGSIQIATHDGMIRVFT--------NVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLEGTT--------VSDSA
+V++ GS +H G + T N+ YVP + +NLIS+ Y + NGV + +++ L G+ +L+G T ++ S
Subjt: EVLMGIGSIQIATHDGMIRVFT--------NVRYVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSLVKLRGTLRNGLHVLEGTT--------VSDSA
Query: AIA-----SDKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYFLS
++ S K T S WH RL H + L + +S L + C C++ KS +V F + + L+Y++SD+W + S + RY++
Subjt: AIA-----SDKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYFLS
Query: IIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASL
+D F+R K +EN+ ++ +DNG EFV + GI+ + +TP+ NGL+ER +R I+E LL++AS+
Subjt: IIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASL
Query: PLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVK---DGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVT
P +W A YLINR + L L++P + G +P+ D LR FGC+ Y ++ KL+ + +C+F+GY Y CL ++ I V
Subjt: PLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVK---DGKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDVT
Query: FNE
F+E
Subjt: FNE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.2e-32 | 28.47 | Show/hide |
Query: EVLMGIGSIQIATHDGMIRVFTNVR--------YVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSL-VKLRGTLRNGLHVLEGTT--------VSDS
+V++ GS TH G + T+ R YVP + +NLIS+ L C + ++ S VK L G+ +L+G T ++ S
Subjt: EVLMGIGSIQIATHDGMIRVFTNVR--------YVPELKRNLISIGDLDRSGYTCKSENGVMKVTKGSL-VKLRGTLRNGLHVLEGTT--------VSDS
Query: AAIA-----SDKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYFL
A++ K T S WH RL H S L + +S L +L C C + KS +V F T++ L+Y++SD+W + S++ RY++
Subjt: AAIA-----SDKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLRGVKDVELPFCEHCIMRKSTRVRFGKGKHTTNGILDYVHSDLWGPMKVPSMEGSRYFL
Query: SIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNAS
+D F+R K VEN+ ++ L +DNG EFV + GI+ + +TP+ NGL+ER +R I+E LL++AS
Subjt: SIIDDFSR--------------------KKQVENQTGRKVKYLRTDNGLEFVNNKFNTFCKSKGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNAS
Query: LPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKD---GKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDV
+P +W A YLINR + L L++P + G+ P+ + L+ FGC+ Y ++ KL + +C F+GY Y CL + V
Subjt: LPLKFWGEAAQTVCYLINRSHSTALDLKTPQEVWTGKAPSLDHLRAFGCSTYAHVKD---GKLNKRVLKCMFIGYPQGVKGYKLWCLEKGINKCIIGIDV
Query: TFNE
F+E
Subjt: TFNE
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