; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G22680 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G22680
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDouble-stranded RNA-binding protein 2-like
Genome locationChr1:18251293..18252272
RNA-Seq ExpressionCSPI01G22680
SyntenyCSPI01G22680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653233.1 hypothetical protein Csa_019953 [Cucumis sativus]8.6e-6999.27Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP
         AMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP

XP_008457578.1 PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo]5.1e-6190.98Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGR
        FAMVKAAA+Q SSGAL+ +FRRLLCCVAKVDGR
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGR

XP_011648508.1 uncharacterized protein LOC105434501 [Cucumis sativus]8.6e-6999.27Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP
         AMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP

XP_022970388.1 uncharacterized protein LOC111469389 [Cucurbita maxima]4.6e-4674.63Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSRED  V E+T Q C GK++RRRR PA IRGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRR
        FA+V+AAA++ SSGALL +FRRLLCCVAKVDGR+
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRR

XP_023519361.1 uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]1.9e-4473.13Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISEC+++ CI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSRED  V E+T Q C GK++RRRR PA IRGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRR
        FA+V+AAA++ SSGALL +FRRLL CVAKVDGR+
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRR

TrEMBL top hitse value%identityAlignment
A0A0A0LXY3 Uncharacterized protein4.2e-6999.27Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP
         AMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRP

A0A1S3C748 uncharacterized protein LOC1034972452.4e-6190.98Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGR
        FAMVKAAA+Q SSGAL+ +FRRLLCCVAKVDGR
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGR

A0A5A7SXG3 Uncharacterized protein2.4e-6190.98Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGR
        FAMVKAAA+Q SSGAL+ +FRRLLCCVAKVDGR
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGR

A0A6J1HP59 uncharacterized protein LOC1114647451.6e-4473.13Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTF RED VV E+T Q C GK++ RRR PA IRGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRR
        FA+V+AAA++ SSGALL +FRRLL CVAKVDGR+
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRR

A0A6J1I3Q2 uncharacterized protein LOC1114693892.2e-4674.63Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSRED  V E+T Q C GK++RRRR PA IRGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRR
        FA+V+AAA++ SSGALL +FRRLLCCVAKVDGR+
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46300.1 unknown protein8.4e-0633.81Show/hide
Query:  MASVCISECV----DNACIVSAARP--TYVNLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPA
        MAS CI +CV    D+ C+    RP  TY NL +W   E       + +  + R    D IS RQMYLRSYTFS E+    E       G+   RR   +
Subjt:  MASVCISECV----DNACIVSAARP--TYVNLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPA

Query:  TIRGGRRRSRCFAMVKAAASQVSSGALLFLFRRLLCCVA
          RGG  R +  A   A  +  +     F+FR +  C++
Subjt:  TIRGGRRRSRCFAMVKAAASQVSSGALLFLFRRLLCCVA

AT3G46310.1 unknown protein2.7e-0440.54Show/hide
Query:  MASVCISECV---DNACIVSAARPTYVNLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSRED
        MAS CI +CV   +NA  V   R T+  + +W   E       S +    R  A + +S RQMYLRSYTFSR++
Subjt:  MASVCISECV---DNACIVSAARPTYVNLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSRED

AT5G02640.1 unknown protein3.5e-1237.18Show/hide
Query:  MASVCISECVDNA----CIVSAARPTYVNLQRWSEEE-KWSTERRR----PRPRAADGISRRQMYLRSYTFSRED-----IVVPETTTQNCFGKIR---R
        M SVCIS C+++A      V   R +YVNL +W E + ++    RR    P  R  D IS RQMYLRSYTFSRED       V   T  +C G+++    
Subjt:  MASVCISECVDNA----CIVSAARPTYVNLQRWSEEE-KWSTERRR----PRPRAADGISRRQMYLRSYTFSRED-----IVVPETTTQNCFGKIR---R

Query:  RRRKPATIRG--------GRRRSRCFAMVKAAASQVSSGALLFLFRRLLCCVAKVD
         RRK     G         RRR     + +    + +   +L +FRRLL C A VD
Subjt:  RRRKPATIRG--------GRRRSRCFAMVKAAASQVSSGALLFLFRRLLCCVAKVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAAAAGTGGTCTAC
AGAGCGCCGCCGTCCAAGGCCGAGAGCGGCTGACGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACATCGTTGTCCCTGAGACTACAA
CTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCGGAAGCCAGCGACGATTCGCGGCGGTCGTAGGAGGAGCCGATGTTTCGCCATGGTGAAGGCCGCCGCCAGTCAG
GTTTCTTCCGGCGCCTTGCTCTTCTTGTTCCGAAGGTTGCTTTGTTGCGTCGCGAAAGTCGACGGTCGTCGCTCACGGCCGTAA
mRNA sequenceShow/hide mRNA sequence
ACAAAACTGTAATTAAACAAAACATAAATAAATCAATACTTAATCCATCTTTCTTAGTTGTATTTCTTTAACAATCAAACTAATCTCTCTCTCTCTTGCAATTTATTTCT
TGACATTAATCATCTTTGTTAGTTGTAATCTCAACTACACACAAAAATCCATTTCCCCATTTTCAAAATTCTCTAAAATTCTATCATTTTCGCCGGAATTTCTTCATCGA
AGCTACGATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAAAAGT
GGTCTACAGAGCGCCGCCGTCCAAGGCCGAGAGCGGCTGACGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACATCGTTGTCCCTGAG
ACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCGGAAGCCAGCGACGATTCGCGGCGGTCGTAGGAGGAGCCGATGTTTCGCCATGGTGAAGGCCGCCGC
CAGTCAGGTTTCTTCCGGCGCCTTGCTCTTCTTGTTCCGAAGGTTGCTTTGTTGCGTCGCGAAAGTCGACGGTCGTCGCTCACGGCCGTAAGTGTTTGTGAATTTTGTGA
AATCAAAGGTTTCTTTTTCTTTTTTTTTGTCTTCTTTTCAATGAAATAGGCAAATATGAAATAAAGGTAAAGGAAACATAAAAATTCAGTCCGTGGAGGGGCACCATGAT
CACCATCTAGTTGGGATGAACAATGGGTCATGTTCACTTGGCACCTATTAGTCGACGAGTCACTCTATGAGTCATCAATTAGTTTACATTCGACCTCCTCAATAATGACG
TATATACACAAGTCTAAATATTGTGAGCTTACATCTTCACTTCATTAAGGATCATCTCCACCTCCCAAATTTCATTTCCTTTTCCTAGTGTGTATGAATC
Protein sequenceShow/hide protein sequence
MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRCFAMVKAAASQ
VSSGALLFLFRRLLCCVAKVDGRRSRP