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CSPI01G23010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G23010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationChr1:18685305..18685745
RNA-Seq ExpressionCSPI01G23010
SyntenyCSPI01G23010
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653244.1 hypothetical protein Csa_019886, partial [Cucumis sativus]2.9e-6295.28Show/hide
Query:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
        SPSPLPSLHSLILL RYIEDLLM SMFLSI+LLLFISILCRKRSAKSDVEEFPENVDIEA IFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
Subjt:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK

Query:  DCIDRWFKVDAHCPICRTSVCVVVVDR
        DCI RWFKVD HCPICRTSVCVVVVDR
Subjt:  DCIDRWFKVDAHCPICRTSVCVVVVDR

XP_011648512.2 RING-H2 finger protein ATL79 [Cucumis sativus]1.7e-5475Show/hide
Query:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
        SPSPLP LHS ILL  +   L+ +SM L I+L LFI+ILC KRSAKSD EE  EN+DIEA IFHY G EG EQ+C ICLCEIEEGEKCRKMKTCGHVFHK
Subjt:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK

Query:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN
        DCIDRWFKV+ HCPICRTSVC+VV+DRGGNAM SS+SLL P++N
Subjt:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN

XP_011648513.1 RING-H2 finger protein ATL39 [Cucumis sativus]6.8e-7295.14Show/hide
Query:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
        SPSPLPSLHSLILL RYIEDLLM SMFLSI+LLLFISILCRKRSAKSDVEEFPENVDIEA IFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
Subjt:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK

Query:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN
        DCI RWFKVD HCPICRTSVCVVVVDRGGNA+TSSTSLLIPYMN
Subjt:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN

XP_011659772.1 RING-H2 finger protein ATL39 [Cucumis sativus]9.5e-5879.17Show/hide
Query:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
        SPSP+PSLHSLILL  +I DLL + M L I+L  FI ILCRKRSAKSD EE PEN+DIEA IFHY G EG EQ+CAICLCEIEEGEKCRKMKTCGHVFHK
Subjt:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK

Query:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN
        DCIDRWFKVD HCPICRTSVCVVVVD GGNAM SS+SL  P++N
Subjt:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN

XP_011659858.1 E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]5.8e-5576.39Show/hide
Query:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
        SPSPLP LHS ILL  +   LL +SM L I+L LFI+ILC KRSAKSD EE  EN+DIEA IFHY   EGGEQ+CAICLCEIEEGEKCRKMKTCGHVFHK
Subjt:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK

Query:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN
        DCIDRWFKV+ HCPICRTSVCVVV+DRGGNAM SS+SL  P++N
Subjt:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN

TrEMBL top hitse value%identityAlignment
A0A0A0K790 RING-type domain-containing protein4.6e-5879.17Show/hide
Query:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
        SPSP+PSLHSLILL  +I DLL + M L I+L  FI ILCRKRSAKSD EE PEN+DIEA IFHY G EG EQ+CAICLCEIEEGEKCRKMKTCGHVFHK
Subjt:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK

Query:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN
        DCIDRWFKVD HCPICRTSVCVVVVD GGNAM SS+SL  P++N
Subjt:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN

A0A0A0LUU6 RING-type E3 ubiquitin transferase1.9e-4875.81Show/hide
Query:  LLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV
        L+ +SM L I+L LFI+ILC KRSAK D EE  +N+DIEA IFHY G EGGEQ+C ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+ HCPICRTSV
Subjt:  LLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV

Query:  CVVVVDRGGNAMTSSTSLLIPYMN
        C+VV+DRGGNAM SS+SL  P++N
Subjt:  CVVVVDRGGNAMTSSTSLLIPYMN

A0A0A0LY10 RING-type E3 ubiquitin transferase3.3e-7295.14Show/hide
Query:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
        SPSPLPSLHSLILL RYIEDLLM SMFLSI+LLLFISILCRKRSAKSDVEEFPENVDIEA IFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK
Subjt:  SPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHK

Query:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN
        DCI RWFKVD HCPICRTSVCVVVVDRGGNA+TSSTSLLIPYMN
Subjt:  DCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN

A0A0A0LY13 RING-type E3 ubiquitin transferase9.0e-5484.43Show/hide
Query:  MLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCV
        M+SMFL I+LL FISI+C KR AKSDVEE P+NVD+EA +FHY GDEGGEQ+ AICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVD HCPICRTSVCV
Subjt:  MLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCV

Query:  VVVDRGGNAMTSSTSLLIPYMN
        VVVD GGNAM SSTSL IPYMN
Subjt:  VVVDRGGNAMTSSTSLLIPYMN

A0A5A7VKL1 RING-type E3 ubiquitin transferase1.3e-4773.33Show/hide
Query:  SPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDC
        SPLP LHS I+L R IEDLLMLSMFL ++L+L I+ILC KRSAKSD +E  +N+DI+ASIFHYG D   +Q+CAICLCEIEEGEKCRKMKTCGHVFHKDC
Subjt:  SPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDC

Query:  IDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTS
        IDRWF V+ HCP+CRT VC VVVDR  N M SS+S
Subjt:  IDRWFKVDAHCPICRTSVCVVVVDRGGNAMTSSTS

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL445.3e-1143.28Show/hide
Query:  DEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTS
        +EG   +CAICL +  +GE+ R +  CGH FH +CID+W    + CP CR  +  V  DR G+A T+
Subjt:  DEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTS

O82353 RING-H2 finger protein ATL676.9e-1148.33Show/hide
Query:  ASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTS
        AS   +GG  GG+  C+ICLCE +E E  R M  C H FH  C+D W K++  CP+CR S
Subjt:  ASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTS

P93823 RING-H2 finger protein ATL11.2e-1056.25Show/hide
Query:  QDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV
        Q+C++CL E +E EK R +  C HVFH DCID W + +A+CP+CRTSV
Subjt:  QDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV

Q9LSW9 RING-H2 finger protein ATL169.0e-1141.1Show/hide
Query:  EFPENVDIEASIFHYGGDEGGE---QDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV
        +F +  D    +F   G+E  E   Q+C++CL E ++ EK R +  C H+FH DCID W + +A+CP+CRT V
Subjt:  EFPENVDIEASIFHYGGDEGGE---QDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV

Q9SRM0 RING-H2 finger protein ATL661.5e-1045.45Show/hide
Query:  DEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCV
        +E  E++C ICL   EEGEK + +  C H +H +C+DRW K ++ CP+CR S+ V
Subjt:  DEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCV

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein8.4e-1256.25Show/hide
Query:  QDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV
        Q+C++CL E +E EK R +  C HVFH DCID W + +A+CP+CRTSV
Subjt:  QDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV

AT2G17450.1 RING-H2 finger A3A3.8e-1243.28Show/hide
Query:  DEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTS
        +EG   +CAICL +  +GE+ R +  CGH FH +CID+W    + CP CR  +  V  DR G+A T+
Subjt:  DEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCVVVVDRGGNAMTS

AT2G46160.1 RING/U-box superfamily protein4.9e-1248.33Show/hide
Query:  ASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTS
        AS   +GG  GG+  C+ICLCE +E E  R M  C H FH  C+D W K++  CP+CR S
Subjt:  ASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTS

AT3G11110.1 RING/U-box superfamily protein1.1e-1145.45Show/hide
Query:  DEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCV
        +E  E++C ICL   EEGEK + +  C H +H +C+DRW K ++ CP+CR S+ V
Subjt:  DEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSVCV

AT5G43420.1 RING/U-box superfamily protein6.4e-1241.1Show/hide
Query:  EFPENVDIEASIFHYGGDEGGE---QDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV
        +F +  D    +F   G+E  E   Q+C++CL E ++ EK R +  C H+FH DCID W + +A+CP+CRT V
Subjt:  EFPENVDIEASIFHYGGDEGGE---QDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDAHCPICRTSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCACCGTCGCCTCTGCCGTCGTTGCACTCACTGATCCTACTTTCTCGCTACATTGAGGATTTGCTGATGCTCTCCATGTTTCTTTCCATTATACTACTTTTATT
CATTTCCATTTTATGTAGAAAACGATCCGCCAAATCTGACGTGGAAGAGTTTCCGGAGAATGTGGACATTGAAGCATCGATTTTTCATTATGGCGGAGATGAAGGCGGCG
AACAAGATTGTGCAATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAAACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGGTGGTTTAAG
GTGGATGCTCACTGTCCAATTTGTCGGACCTCCGTTTGTGTAGTAGTCGTTGATCGCGGTGGAAATGCCATGACTTCTTCTACATCCTTACTGATCCCCTACATGAACTG
A
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCACCGTCGCCTCTGCCGTCGTTGCACTCACTGATCCTACTTTCTCGCTACATTGAGGATTTGCTGATGCTCTCCATGTTTCTTTCCATTATACTACTTTTATT
CATTTCCATTTTATGTAGAAAACGATCCGCCAAATCTGACGTGGAAGAGTTTCCGGAGAATGTGGACATTGAAGCATCGATTTTTCATTATGGCGGAGATGAAGGCGGCG
AACAAGATTGTGCAATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAAACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGGTGGTTTAAG
GTGGATGCTCACTGTCCAATTTGTCGGACCTCCGTTTGTGTAGTAGTCGTTGATCGCGGTGGAAATGCCATGACTTCTTCTACATCCTTACTGATCCCCTACATGAACTG
A
Protein sequenceShow/hide protein sequence
MSSPSPLPSLHSLILLSRYIEDLLMLSMFLSIILLLFISILCRKRSAKSDVEEFPENVDIEASIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFK
VDAHCPICRTSVCVVVVDRGGNAMTSSTSLLIPYMN