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CSPI01G23040 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G23040
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr1:18712838..18713281
RNA-Seq ExpressionCSPI01G23040
SyntenyCSPI01G23040
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067735.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa]6.0e-6075.16Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-
        MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFS YREAK SEN 
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-

Query:  ----DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
            DDDYECVICLNKFED QKC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Subjt:  ----DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

KAE8653246.1 hypothetical protein Csa_019623 [Cucumis sativus]1.9e-5397.06Show/hide
Query:  KTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVV
        K GNNESE DTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH SCIDRWLRTERECPLCRSCVCVVV
Subjt:  KTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVV

Query:  NP
        NP
Subjt:  NP

XP_004151032.1 RING-H2 finger protein ATL66 [Cucumis sativus]1.8e-8097.96Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICL
        MSPPPYIAASPMPTNGFEAIFDD+ELLAAICFAIIVYFLSFTFYFKTGNNESE DTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICL
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICL

Query:  NKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
        NKFEDGQKCQWMKKCGHIFH SCIDRWLRTERECPLCRSCVCVVVNP
Subjt:  NKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

XP_008457571.1 PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo]4.6e-6075.62Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-
        MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFS YREAK SEN 
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-

Query:  ---DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
           DDDYECVICLNKFED QKC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Subjt:  ---DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]1.2e-3153.85Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYEL--------LAAICFAIIVYFLSFTFYFKTGNNESEVDTGT-VEDRLPVFREREIVQIETMVFSYYREAKGSEND
        M  PP  AASP P     AI   Y L        L AICF II+Y +   F+      +SE+++G+     LPV RE EIV+IE  VFS YREA G  +D
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYEL--------LAAICFAIIVYFLSFTFYFKTGNNESEVDTGT-VEDRLPVFREREIVQIETMVFSYYREAKGSEND

Query:  DDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
           EC ICL++FEDGQKC+ M KCGHIFHR CIDRWL+ +R CPLCRSCVCVVV+P
Subjt:  DDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

TrEMBL top hitse value%identityAlignment
A0A0A0LXE1 RING-type domain-containing protein8.7e-8197.96Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICL
        MSPPPYIAASPMPTNGFEAIFDD+ELLAAICFAIIVYFLSFTFYFKTGNNESE DTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICL
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICL

Query:  NKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
        NKFEDGQKCQWMKKCGHIFH SCIDRWLRTERECPLCRSCVCVVVNP
Subjt:  NKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

A0A1S3C6H7 RING-H2 finger protein ATL66-like2.2e-6075.62Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-
        MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFS YREAK SEN 
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-

Query:  ---DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
           DDDYECVICLNKFED QKC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Subjt:  ---DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

A0A5A7VPW6 RING-H2 finger protein ATL66-like2.9e-6075.16Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-
        MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFS YREAK SEN 
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-

Query:  ----DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
            DDDYECVICLNKFED QKC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Subjt:  ----DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

A0A5D3BGV5 RING-H2 finger protein ATL66-like2.2e-6075.62Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-
        MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFS YREAK SEN 
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-

Query:  ---DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
           DDDYECVICLNKFED QKC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Subjt:  ---DDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

A0A6J1KAT3 RING-type E3 ubiquitin transferase5.7e-3253.85Show/hide
Query:  MSPPPYIAASPMPTNGFEAIFDDYEL--------LAAICFAIIVYFLSFTFYFKTGNNESEVDTGT-VEDRLPVFREREIVQIETMVFSYYREAKGSEND
        M  PP  AASP P     AI   Y L        L AICF II+Y +   F+      +SE+++G+     LPV RE EIV+IE  VFS YREA G  +D
Subjt:  MSPPPYIAASPMPTNGFEAIFDDYEL--------LAAICFAIIVYFLSFTFYFKTGNNESEVDTGT-VEDRLPVFREREIVQIETMVFSYYREAKGSEND

Query:  DDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
           EC ICL++FEDGQKC+ M KCGHIFHR CIDRWL+ +R CPLCRSCVCVVV+P
Subjt:  DDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

SwissProt top hitse value%identityAlignment
Q8RXX9 E3 ubiquitin-protein ligase ATL65.3e-1129.79Show/hide
Query:  ASPMPTN---GFEAIFDDYELLAAICFAIIVYFLSFTFYFK--TGNNESEVD-TGTVEDRLPV---FREREIVQIETMVFSYYREAKGSE-NDDDYECVI
        + P PTN    +  +     ++  I  A + +   F+ YF+  +G  ++ V   G    R  V    R  ++  +ET     Y + K  +    + EC I
Subjt:  ASPMPTN---GFEAIFDDYELLAAICFAIIVYFLSFTFYFK--TGNNESEVD-TGTVEDRLPV---FREREIVQIETMVFSYYREAKGSE-NDDDYECVI

Query:  CLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRS
        CLN+FED +  + + KC H+FH  CID WL     CP+CR+
Subjt:  CLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRS

Q9LF64 RING-H2 finger protein ATL529.1e-1138.67Show/hide
Query:  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
        E+M+   + Y+   G    D  +C +CL++FE+ +  + + KC H FH  CID WL++   CPLCR+ V  V NP
Subjt:  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

Q9LRB7 E3 ubiquitin-protein ligase EL51.8e-1145.76Show/hide
Query:  ENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
        E+DD  EC +CL + EDG++ +++ +CGH FH  C+D WL +   CPLCR  V V   P
Subjt:  ENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

Q9LX93 E3 ubiquitin-protein ligase RING12.4e-1143.55Show/hide
Query:  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
        KG    D  EC +CLN+FE+ +  + + KC H FH +CID WL + + CPLCR+ V ++  P
Subjt:  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

Q9SRM0 RING-H2 finger protein ATL664.1e-1131.67Show/hide
Query:  AAICFAIIVYFLSFTFYFKTG--NNESEVDTGTVEDRLPVFREREI--VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSC
        A   F+++++F   T Y        +S     +  DRL   R   +   +I ++     R  + +E +++ EC ICL  FE+G+K + +  C H +H  C
Subjt:  AAICFAIIVYFLSFTFYFKTG--NNESEVDTGTVEDRLPVFREREI--VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSC

Query:  IDRWLRTERECPLCRSCVCV
        +DRWL+TE  CPLCR  + V
Subjt:  IDRWLRTERECPLCRSCVCV

Arabidopsis top hitse value%identityAlignment
AT3G05200.1 RING/U-box superfamily protein3.8e-1229.79Show/hide
Query:  ASPMPTN---GFEAIFDDYELLAAICFAIIVYFLSFTFYFK--TGNNESEVD-TGTVEDRLPV---FREREIVQIETMVFSYYREAKGSE-NDDDYECVI
        + P PTN    +  +     ++  I  A + +   F+ YF+  +G  ++ V   G    R  V    R  ++  +ET     Y + K  +    + EC I
Subjt:  ASPMPTN---GFEAIFDDYELLAAICFAIIVYFLSFTFYFK--TGNNESEVD-TGTVEDRLPV---FREREIVQIETMVFSYYREAKGSE-NDDDYECVI

Query:  CLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRS
        CLN+FED +  + + KC H+FH  CID WL     CP+CR+
Subjt:  CLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRS

AT3G11110.1 RING/U-box superfamily protein2.9e-1231.67Show/hide
Query:  AAICFAIIVYFLSFTFYFKTG--NNESEVDTGTVEDRLPVFREREI--VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSC
        A   F+++++F   T Y        +S     +  DRL   R   +   +I ++     R  + +E +++ EC ICL  FE+G+K + +  C H +H  C
Subjt:  AAICFAIIVYFLSFTFYFKTG--NNESEVDTGTVEDRLPVFREREI--VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSC

Query:  IDRWLRTERECPLCRSCVCV
        +DRWL+TE  CPLCR  + V
Subjt:  IDRWLRTERECPLCRSCVCV

AT3G61460.1 brassinosteroid-responsive RING-H26.5e-1244.07Show/hide
Query:  YREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWL-RTERECPLCRS
        + E   S  D    C +CL +FE  Q+ +W++ C HIFHRSC+DRW+   ++ CPLCR+
Subjt:  YREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWL-RTERECPLCRS

AT5G10380.1 RING/U-box superfamily protein1.7e-1243.55Show/hide
Query:  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
        KG    D  EC +CLN+FE+ +  + + KC H FH +CID WL + + CPLCR+ V ++  P
Subjt:  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP

AT5G17600.1 RING/U-box superfamily protein6.5e-1238.67Show/hide
Query:  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP
        E+M+   + Y+   G    D  +C +CL++FE+ +  + + KC H FH  CID WL++   CPLCR+ V  V NP
Subjt:  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCCCCGCCGTATATTGCCGCTTCTCCAATGCCAACGAACGGGTTCGAAGCCATTTTTGATGACTATGAGCTTTTGGCAGCCATATGTTTTGCCATTATAGTCTA
CTTCCTCTCCTTCACTTTCTACTTCAAAACCGGAAATAATGAATCAGAAGTCGACACTGGGACGGTCGAAGATCGATTGCCTGTGTTCCGAGAGCGGGAGATTGTACAGA
TTGAGACAATGGTTTTCAGTTATTACAGGGAAGCTAAGGGAAGTGAGAATGATGATGATTACGAATGTGTGATTTGCTTGAATAAATTCGAAGATGGCCAAAAATGCCAA
TGGATGAAAAAGTGTGGTCATATATTTCATCGTAGCTGCATCGATCGGTGGCTCAGGACGGAGCGGGAATGTCCGCTTTGCCGAAGCTGCGTTTGCGTCGTCGTCAATCC
ATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCCCCGCCGTATATTGCCGCTTCTCCAATGCCAACGAACGGGTTCGAAGCCATTTTTGATGACTATGAGCTTTTGGCAGCCATATGTTTTGCCATTATAGTCTA
CTTCCTCTCCTTCACTTTCTACTTCAAAACCGGAAATAATGAATCAGAAGTCGACACTGGGACGGTCGAAGATCGATTGCCTGTGTTCCGAGAGCGGGAGATTGTACAGA
TTGAGACAATGGTTTTCAGTTATTACAGGGAAGCTAAGGGAAGTGAGAATGATGATGATTACGAATGTGTGATTTGCTTGAATAAATTCGAAGATGGCCAAAAATGCCAA
TGGATGAAAAAGTGTGGTCATATATTTCATCGTAGCTGCATCGATCGGTGGCTCAGGACGGAGCGGGAATGTCCGCTTTGCCGAAGCTGCGTTTGCGTCGTCGTCAATCC
ATAA
Protein sequenceShow/hide protein sequence
MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQ
WMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP