; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G23070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G23070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr1:18723116..18723565
RNA-Seq ExpressionCSPI01G23070
SyntenyCSPI01G23070
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153928.3 RING-H2 finger protein ATL67 [Cucumis sativus]6.3e-7393.29Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        MPLSPSPLPPLHSPILLPGFFMVL+T+SMLLLIVLFLFIAILCTKRSAK D EE S+NLDIEAPIFHY+ VE GEQECAICLCEIEEGEKCRKMKTCGHV
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI
        FHKDCIDRWFKVNGHCPICRTSVC+VVIDRGGNAMASSSSLPTPFINRI
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI

XP_011648512.2 RING-H2 finger protein ATL79 [Cucumis sativus]9.0e-7292.62Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        MPLSPSPLPPLHSPILLPGFFMVL+T+SMLLLIVLFLFIAILCTKRSAKSD EE SENLDIEAPIFHY+ VEG EQEC ICLCEIEEGEKCRKMKTCGHV
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI
        FHKDCIDRWFKVNGHCPICRTSVC+VVIDRGGNAMASSSSL TPFIN+I
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI

XP_011648513.1 RING-H2 finger protein ATL39 [Cucumis sativus]5.3e-5677.55Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        M LSPSPLP LHS ILLP +   LL  SM L IVL LFI+ILC KRSAKSD EE  EN+DIEAPIFHY   EGGEQ+CAICLCEIEEGEKCRKMKTCGHV
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFIN
        FHKDCI RWFKV+GHCPICRTSVCVVV+DRGGNA+ SS+SL  P++N
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFIN

XP_011659772.1 RING-H2 finger protein ATL39 [Cucumis sativus]5.1e-6787.92Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        MPLSPSP+P LHS ILLPGF M LLT+ MLLLIVLF FI ILC KRSAKSD EEL ENLDIEAPIFHYN VEG EQECAICLCEIEEGEKCRKMKTCGHV
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI
        FHKDCIDRWFKV+GHCPICRTSVCVVV+D GGNAMASSSSLPTPFIN+I
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI

XP_011659858.1 E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]2.9e-78100Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI
        FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI

TrEMBL top hitse value%identityAlignment
A0A0A0K790 RING-type domain-containing protein2.5e-6787.92Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        MPLSPSP+P LHS ILLPGF M LLT+ MLLLIVLF FI ILC KRSAKSD EEL ENLDIEAPIFHYN VEG EQECAICLCEIEEGEKCRKMKTCGHV
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI
        FHKDCIDRWFKV+GHCPICRTSVCVVV+D GGNAMASSSSLPTPFIN+I
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI

A0A0A0LUU6 RING-type E3 ubiquitin transferase2.0e-6192.19Show/hide
Query:  MVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRT
        MVL+T+SMLLLIVLFLFIAILCTKRSAK D EE S+NLDIEAPIFHY+ VEGGEQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRT
Subjt:  MVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRT

Query:  SVCVVVIDRGGNAMASSSSLPTPFINRI
        SVC+VVIDRGGNAMASSSSLPTPFINRI
Subjt:  SVCVVVIDRGGNAMASSSSLPTPFINRI

A0A0A0LY10 RING-type E3 ubiquitin transferase2.6e-5677.55Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        M LSPSPLP LHS ILLP +   LL  SM L IVL LFI+ILC KRSAKSD EE  EN+DIEAPIFHY   EGGEQ+CAICLCEIEEGEKCRKMKTCGHV
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFIN
        FHKDCI RWFKV+GHCPICRTSVCVVV+DRGGNA+ SS+SL  P++N
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFIN

A0A1S3C741 RING-type E3 ubiquitin transferase1.4e-4974.13Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        +PL PSPLPPLHSPI+LP     LL +SM LL+VL L IAILC KRSAKSD +ELS+NL+I+APIFHY      EQECAICLCEIEEGEKCRKMKTCGH 
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPT
        FHKDCIDRWF V  HCP+CRTS CVVV DR  N MASSSS PT
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPT

A0A5D3BG26 RING-type E3 ubiquitin transferase1.4e-4974.13Show/hide
Query:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV
        +PL PSPLPPLHSPI+LP     LL +SM LL+VL L IAILC KRSAKSD +ELS+NL+I+APIFHY      EQECAICLCEIEEGEKCRKMKTCGH 
Subjt:  MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHV

Query:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPT
        FHKDCIDRWF V  HCP+CRTS CVVV DR  N MASSSS PT
Subjt:  FHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPT

SwissProt top hitse value%identityAlignment
O22255 RING-H2 finger protein ATL648.4e-1235.92Show/hide
Query:  SAKSDREELSENLDIEAPIFHYNEVE----GGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSV--CVVVIDRGGNAMASSSS
        SA    + L + +  + PIF Y+         ++EC++CL E EE ++ R +  CGH FH DCID WF+    CP+CR  V     VI+ G ++ +S  +
Subjt:  SAKSDREELSENLDIEAPIFHYNEVE----GGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSV--CVVVIDRGGNAMASSSS

Query:  LPT
         PT
Subjt:  LPT

O64763 E3 ubiquitin-protein ligase ATL91.7e-1231.29Show/hide
Query:  VLLTISMLLLIVLFL-FIAILCTKRSAKSDREELSENLDIEA-----------------------PIFHYNEVEG-----GEQECAICLCEIEEGEKCRK
        V++ I++L L++ F+ F +I C + +A+  R  +  + D +A                       P F Y+EV+      G  ECA+CLCE E+ E  R 
Subjt:  VLLTISMLLLIVLFL-FIAILCTKRSAKSDREELSENLDIEA-----------------------PIFHYNEVEG-----GEQECAICLCEIEEGEKCRK

Query:  MKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSS
        M  C HVFH DC+D W   +  CP+CR     +V+++ G+   S+ S
Subjt:  MKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSS

Q9LUZ9 RING-H2 finger protein ATL632.4e-1139.53Show/hide
Query:  SAKSDREELSENLDIEAPIFHY---NEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVID
        +A  D + L  ++    P+F Y    E E  E+EC ICL   E G+  RK++ CGH FH +CID W   +  CP+CR+ V   V D
Subjt:  SAKSDREELSENLDIEAPIFHY---NEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVID

Q9LZJ6 RING-H2 finger protein ATL53.2e-1148.39Show/hide
Query:  PIFHYN--EVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSV
        PIF Y+    E   +EC++CL E EE ++ R +  CGHVFH DCID WF+    CP+CR  V
Subjt:  PIFHYN--EVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSV

Q9M313 RING-H2 finger protein ATL682.4e-1150.91Show/hide
Query:  YNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTS
        +++ EG E  C+ICLCE  E E  R M  C H FH  C+D W K+NG CP+CR S
Subjt:  YNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTS

Arabidopsis top hitse value%identityAlignment
AT2G35000.1 RING/U-box superfamily protein1.2e-1331.29Show/hide
Query:  VLLTISMLLLIVLFL-FIAILCTKRSAKSDREELSENLDIEA-----------------------PIFHYNEVEG-----GEQECAICLCEIEEGEKCRK
        V++ I++L L++ F+ F +I C + +A+  R  +  + D +A                       P F Y+EV+      G  ECA+CLCE E+ E  R 
Subjt:  VLLTISMLLLIVLFL-FIAILCTKRSAKSDREELSENLDIEA-----------------------PIFHYNEVEG-----GEQECAICLCEIEEGEKCRK

Query:  MKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSS
        M  C HVFH DC+D W   +  CP+CR     +V+++ G+   S+ S
Subjt:  MKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSS

AT2G47560.1 RING/U-box superfamily protein5.9e-1335.92Show/hide
Query:  SAKSDREELSENLDIEAPIFHYNEVE----GGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSV--CVVVIDRGGNAMASSSS
        SA    + L + +  + PIF Y+         ++EC++CL E EE ++ R +  CGH FH DCID WF+    CP+CR  V     VI+ G ++ +S  +
Subjt:  SAKSDREELSENLDIEAPIFHYNEVE----GGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSV--CVVVIDRGGNAMASSSS

Query:  LPT
         PT
Subjt:  LPT

AT3G61550.1 RING/U-box superfamily protein1.7e-1250.91Show/hide
Query:  YNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTS
        +++ EG E  C+ICLCE  E E  R M  C H FH  C+D W K+NG CP+CR S
Subjt:  YNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTS

AT3G62690.1 AtL52.3e-1248.39Show/hide
Query:  PIFHYN--EVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSV
        PIF Y+    E   +EC++CL E EE ++ R +  CGHVFH DCID WF+    CP+CR  V
Subjt:  PIFHYN--EVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSV

AT5G58580.1 TOXICOS EN LEVADURA 631.7e-1239.53Show/hide
Query:  SAKSDREELSENLDIEAPIFHY---NEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVID
        +A  D + L  ++    P+F Y    E E  E+EC ICL   E G+  RK++ CGH FH +CID W   +  CP+CR+ V   V D
Subjt:  SAKSDREELSENLDIEAPIFHY---NEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTGTCACCGTCGCCTCTGCCGCCATTGCACTCTCCAATCCTACTTCCTGGCTTCTTTATGGTTTTGTTGACGATCTCCATGCTTCTTCTCATTGTGCTATTTTT
ATTCATTGCCATTTTATGTACAAAACGATCCGCCAAATCTGATAGGGAAGAGTTGTCGGAGAATCTGGACATTGAAGCACCGATTTTTCATTACAACGAAGTTGAAGGCG
GCGAACAAGAATGTGCGATTTGCCTCTGTGAAATTGAGGAAGGAGAAAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCACAAAGACTGCATTGACCGGTGGTTT
AAAGTAAATGGCCATTGTCCAATTTGTCGGACCTCCGTTTGTGTGGTAGTCATTGATCGCGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACCGACCCCCTTCATCAA
CCGAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTGTCACCGTCGCCTCTGCCGCCATTGCACTCTCCAATCCTACTTCCTGGCTTCTTTATGGTTTTGTTGACGATCTCCATGCTTCTTCTCATTGTGCTATTTTT
ATTCATTGCCATTTTATGTACAAAACGATCCGCCAAATCTGATAGGGAAGAGTTGTCGGAGAATCTGGACATTGAAGCACCGATTTTTCATTACAACGAAGTTGAAGGCG
GCGAACAAGAATGTGCGATTTGCCTCTGTGAAATTGAGGAAGGAGAAAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCACAAAGACTGCATTGACCGGTGGTTT
AAAGTAAATGGCCATTGTCCAATTTGTCGGACCTCCGTTTGTGTGGTAGTCATTGATCGCGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACCGACCCCCTTCATCAA
CCGAATTTAA
Protein sequenceShow/hide protein sequence
MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF
KVNGHCPICRTSVCVVVIDRGGNAMASSSSLPTPFINRI