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CSPI01G23080 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G23080
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-H2 finger protein ATL14-like
Genome locationChr1:18731587..18732127
RNA-Seq ExpressionCSPI01G23080
SyntenyCSPI01G23080
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583431.1 RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1639.31Show/hide
Query:  GLMLVAVICALMILFMFIFHYCYHQRLLVVHG---DIE--------------------SSQVSGTAAEETSEEIPAAV--KMGFREIKTGEIGDCDGRKC
        G+++++ I  ++ L +F+F  CYH  L+       D+E                     S V+      T+EE  A++  K+ +++IKT E  D D   C
Subjt:  GLMLVAVICALMILFMFIFHYCYHQRLLVVHG---DIE--------------------SSQVSGTAAEETSEEIPAAV--KMGFREIKTGEIGDCDGRKC

Query:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
        A+CIEGF EEEICGV++ CGH FH+ CI++WL IE RCPLCRC V
Subjt:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

XP_022158249.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]6.9e-1738.6Show/hide
Query:  PSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLV----VHGDIES----SQVSGTAAEETSEEIPAAVKM
        P+PPP        P+  +  H S F          G   V  IC  +I+  FI  Y YH+R+++    V+ DIES    S+V      E + + P+    
Subjt:  PSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLV----VHGDIES----SQVSGTAAEETSEEIPAAVKM

Query:  GFRE--------IKTGEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
           E        I+  EI D D R CA+C EGF E+++C VIE CGHFFH+DC+++WL +ER CPLCRCFV
Subjt:  GFRE--------IKTGEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

XP_022158253.1 RING-H2 finger protein ATL14-like [Momordica charantia]1.0e-3155.77Show/hide
Query:  SPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLVVHGDIESSQVSGTAAEETSEEIPAAVKMGFREIKT
        SPSPPP    TT        IH + FHLT RL +ASG M VAV+CA  I  MF+FHY Y  R   VH     SQ       +T+E+IPA+  + +RE   
Subjt:  SPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLVVHGDIESSQVSGTAAEETSEEIPAAVKMGFREIKT

Query:  GEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
         EI DC GR CA+CIEGF EEE CGVIENCGHFFH+DCI+RWL+IE RCPLCRC +
Subjt:  GEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

XP_022964751.1 RING-H2 finger protein ATL64-like [Cucurbita moschata]5.3e-1740.69Show/hide
Query:  GLMLVAVICALMILFMFIFHYCYHQRLLVVHG---DIESS----------------QVSGTAA----EETSEEIPAAV--KMGFREIKTGEIGDCDGRKC
        GL++++ I  ++ L +F+F  CYH  L+       D+E +                Q    AA      T+EE  A++  K+ +R+IKT E  D D   C
Subjt:  GLMLVAVICALMILFMFIFHYCYHQRLLVVHG---DIESS----------------QVSGTAA----EETSEEIPAAV--KMGFREIKTGEIGDCDGRKC

Query:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
        A+CIEGF EEEICGV++ CGH FH+ CI++WLRI  RCPLCRC +
Subjt:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

XP_031742489.1 RING-H2 finger protein ATL1-like [Cucumis sativus]1.6e-8598.74Show/hide
Query:  MSSPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLVVHGDIESSQVSGTAAEETSEEIPAAVKMGFREI
        MSSPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLVVHGDIESSQVSGTAAEETSEEIPA+VKMGFREI
Subjt:  MSSPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLVVHGDIESSQVSGTAAEETSEEIPAAVKMGFREI

Query:  KTGEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFVG
        KTGEIGDCDGRKCA+CIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFVG
Subjt:  KTGEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFVG

TrEMBL top hitse value%identityAlignment
A0A5A7VMH1 RING-H2 finger protein ATL52-like1.3e-1638.62Show/hide
Query:  GLMLVAVICALMILFMF-IFHYCYH-------------------QRLLVVHGDIESSQVSGTAAEETS--EEIPAAVKMGFREIKTGEIGD---CDGRKC
        G + V+V+C ++I+F+F I+HY                      Q L     +I   + + T + +T+  EE  +AV     ++K  E G    C    C
Subjt:  GLMLVAVICALMILFMF-IFHYCYH-------------------QRLLVVHGDIESSQVSGTAAEETS--EEIPAAVKMGFREIKTGEIGD---CDGRKC

Query:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
        A+CIE F +EEICGV+E+CGH FH DC+++WLRIE RCPLCRC V
Subjt:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

A0A5D3BE50 RING-type E3 ubiquitin transferase1.3e-1638.62Show/hide
Query:  GLMLVAVICALMILFMF-IFHYCYH-------------------QRLLVVHGDIESSQVSGTAAEETS--EEIPAAVKMGFREIKTGEIGD---CDGRKC
        G + V+V+C ++I+F+F I+HY                      Q L     +I   + + T + +T+  EE  +AV     ++K  E G    C    C
Subjt:  GLMLVAVICALMILFMF-IFHYCYH-------------------QRLLVVHGDIESSQVSGTAAEETS--EEIPAAVKMGFREIKTGEIGD---CDGRKC

Query:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
        A+CIE F +EEICGV+E+CGH FH DC+++WLRIE RCPLCRC V
Subjt:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

A0A6J1DVK4 RING-H2 finger protein ATL14-like4.8e-3255.77Show/hide
Query:  SPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLVVHGDIESSQVSGTAAEETSEEIPAAVKMGFREIKT
        SPSPPP    TT        IH + FHLT RL +ASG M VAV+CA  I  MF+FHY Y  R   VH     SQ       +T+E+IPA+  + +RE   
Subjt:  SPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLVVHGDIESSQVSGTAAEETSEEIPAAVKMGFREIKT

Query:  GEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
         EI DC GR CA+CIEGF EEE CGVIENCGHFFH+DCI+RWL+IE RCPLCRC +
Subjt:  GEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

A0A6J1DYV0 E3 ubiquitin-protein ligase RING1-like3.4e-1738.6Show/hide
Query:  PSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLV----VHGDIES----SQVSGTAAEETSEEIPAAVKM
        P+PPP        P+  +  H S F          G   V  IC  +I+  FI  Y YH+R+++    V+ DIES    S+V      E + + P+    
Subjt:  PSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLV----VHGDIES----SQVSGTAAEETSEEIPAAVKM

Query:  GFRE--------IKTGEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
           E        I+  EI D D R CA+C EGF E+++C VIE CGHFFH+DC+++WL +ER CPLCRCFV
Subjt:  GFRE--------IKTGEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

A0A6J1HJU0 RING-type E3 ubiquitin transferase2.6e-1740.69Show/hide
Query:  GLMLVAVICALMILFMFIFHYCYHQRLLVVHG---DIESS----------------QVSGTAA----EETSEEIPAAV--KMGFREIKTGEIGDCDGRKC
        GL++++ I  ++ L +F+F  CYH  L+       D+E +                Q    AA      T+EE  A++  K+ +R+IKT E  D D   C
Subjt:  GLMLVAVICALMILFMFIFHYCYHQRLLVVHG---DIESS----------------QVSGTAA----EETSEEIPAAV--KMGFREIKTGEIGDCDGRKC

Query:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV
        A+CIEGF EEEICGV++ CGH FH+ CI++WLRI  RCPLCRC +
Subjt:  ALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV

SwissProt top hitse value%identityAlignment
P0C041 Putative RING-H2 finger protein ATL532.7e-0839.68Show/hide
Query:  KMGFREIKTGEIG-DCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR
        K+GF ++K  + G   +G  C++C+  F E+E   ++  C H FH  CI+RWL+    CPLCR
Subjt:  KMGFREIKTGEIG-DCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR

Q6NKR1 RING-H2 finger protein ATL282.3e-0740.43Show/hide
Query:  GRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRC
        G +CA+C+  F +E+   +I  C H FH +CI+ W  + + CP+CRC
Subjt:  GRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRC

Q8AWW4 E3 ubiquitin-protein ligase RNF1285.5e-0938.89Show/hide
Query:  SEEIPAAVKMGFREIKTGE-IGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRC
        +E   A  K+  R IK G+ +   DG  CA+CIE +   ++  ++  C HFFH++CI+ WL   R CP+C+C
Subjt:  SEEIPAAVKMGFREIKTGE-IGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRC

Q9LSW9 RING-H2 finger protein ATL161.0e-0746.67Show/hide
Query:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR
        ++C++C+  F +EE   +I NC H FH DCI+ WL+    CPLCR
Subjt:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR

Q9LX93 E3 ubiquitin-protein ligase RING12.3e-0727.04Show/hide
Query:  PPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRL---LVVHGDIESSQVSGTAAEETSEE----------------IPAAVKMG
        PP PP P       L T + +   ++L      L ++F    H    +R+    V  GD    +      E    +                I +   +G
Subjt:  PPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRL---LVVHGDIESSQVSGTAAEETSEE----------------IPAAVKMG

Query:  FREIKTGEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR
        F   K GE G  DG +C++C+  F E+E   ++  C H FH +CI+ WL   + CPLCR
Subjt:  FREIKTGEIGDCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR

Arabidopsis top hitse value%identityAlignment
AT2G37150.1 RING/U-box superfamily protein1.5e-0944.44Show/hide
Query:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR
        RKCA+C+E + E+E  G ++ CGH +H  CI +WL ++  CP+C+
Subjt:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR

AT2G37150.2 RING/U-box superfamily protein1.5e-0944.44Show/hide
Query:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR
        RKCA+C+E + E+E  G ++ CGH +H  CI +WL ++  CP+C+
Subjt:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR

AT2G37150.3 RING/U-box superfamily protein1.5e-0944.44Show/hide
Query:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR
        RKCA+C+E + E+E  G ++ CGH +H  CI +WL ++  CP+C+
Subjt:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR

AT4G17905.1 RING/U-box superfamily protein2.0e-0939.68Show/hide
Query:  KMGFREIKTGEIG-DCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR
        K+GF ++K  + G   +G  C++C+  F E+E   ++  C H FH  CI+RWL+    CPLCR
Subjt:  KMGFREIKTGEIG-DCDGRKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR

AT5G43420.1 RING/U-box superfamily protein7.4e-0946.67Show/hide
Query:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR
        ++C++C+  F +EE   +I NC H FH DCI+ WL+    CPLCR
Subjt:  RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCCATCTCCTCCACCGGTACCGGAATCCACAACACGGCCACCAATTCCTCCGCTACCGATCCACCACAGTAAGTTTCACCTAACGACCAGATTAACAATCGC
AAGCGGGTTGATGTTGGTGGCGGTGATTTGTGCTCTAATGATTTTGTTCATGTTCATATTTCATTATTGTTACCATCAACGACTCCTTGTAGTCCACGGCGACATAGAGT
CAAGCCAAGTATCGGGAACTGCAGCGGAGGAGACGTCGGAGGAAATTCCGGCAGCCGTGAAGATGGGTTTTAGAGAAATAAAAACAGGGGAAATTGGGGATTGCGATGGG
AGGAAGTGTGCGTTATGTATTGAGGGATTTGGGGAAGAGGAGATTTGTGGAGTAATTGAGAATTGTGGCCATTTTTTTCATAGGGATTGTATTAATCGGTGGCTTAGAAT
TGAGAGGCGTTGCCCTCTTTGCCGCTGCTTTGTTGGTCATAGGGCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
CATTGTTTTACATAAAAGAACCAATCAAACCTTCTTCTTCAATTCAGCCATGTCTTCCCCATCTCCTCCACCGGTACCGGAATCCACAACACGGCCACCAATTCCTCCGC
TACCGATCCACCACAGTAAGTTTCACCTAACGACCAGATTAACAATCGCAAGCGGGTTGATGTTGGTGGCGGTGATTTGTGCTCTAATGATTTTGTTCATGTTCATATTT
CATTATTGTTACCATCAACGACTCCTTGTAGTCCACGGCGACATAGAGTCAAGCCAAGTATCGGGAACTGCAGCGGAGGAGACGTCGGAGGAAATTCCGGCAGCCGTGAA
GATGGGTTTTAGAGAAATAAAAACAGGGGAAATTGGGGATTGCGATGGGAGGAAGTGTGCGTTATGTATTGAGGGATTTGGGGAAGAGGAGATTTGTGGAGTAATTGAGA
ATTGTGGCCATTTTTTTCATAGGGATTGTATTAATCGGTGGCTTAGAATTGAGAGGCGTTGCCCTCTTTGCCGCTGCTTTGTTGGTCATAGGGCTTTGTGA
Protein sequenceShow/hide protein sequence
MSSPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYCYHQRLLVVHGDIESSQVSGTAAEETSEEIPAAVKMGFREIKTGEIGDCDG
RKCALCIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFVGHRAL