CuGenDBv2

Gene ID	CSPI01G23180
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Rab5-interacting
Genome location	Chr1:18807511..18809873
RNA-Seq Expression	CSPI01G23180
Synteny	CSPI01G23180
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

1.4e-65

99.21

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Query:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
        MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
Subjt:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV

Query:  LLQEGLFASITLFLLMWTLIYSLGHF
        LLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  LLQEGLFASITLFLLMWTLIYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

1.7e-63

96.85

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

2.5e-62

94.49

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

5.5e-62

93.7

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

1.7e-63

97.64

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQ QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

6.8e-66

99.21

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Query:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
        MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
Subjt:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV

Query:  LLQEGLFASITLFLLMWTLIYSLGHF
        LLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  LLQEGLFASITLFLLMWTLIYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

8.3e-64

96.85

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

A0A5A7VQ84 Rab5-interacting

1.3e-56

90.55

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLL   L   L  F
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

1.2e-62

94.49

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

2.7e-62

93.7

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

2.0e-14

36.04

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Query:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL
        NG L     +K+   + +W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL

Query:  LMWTLIYSLGH
        +     ++ GH
Subjt:  LMWTLIYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

5.6e-17

37.5

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Query:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL
        NG L     +K+   + +W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL

Query:  LMWTLIYSLGHF
        ++W + Y+  H+
Subjt:  LMWTLIYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

5.3e-47

65.41

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Query:  MKDGKSMKVNSQLQ-------QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEE
        MK+GKS K +SQ +       QN HL  F  AKLFD E SWDKDQLGDVLHW+RQ V L+CGLLWG+IPLVGGIW +LFL IS+ ++YGYYA++LK+DEE
Subjt:  MKDGKSMKVNSQLQ-------QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASITLFLLMWTLIYSLGHF
        +FGGH  LLQ+GLFAS++LFLL W L+YSL  F
Subjt:  EFGGHGVLLQEGLFASITLFLLMWTLIYSLGHF

AT5G59410.1 Rab5-interacting family protein

1.8e-50

73.08

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Query:  MKDGKSMKVNSQLQ----QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFG
        MK+ KS K+N   Q    QN HL P KLAKLFDP+ SWDKDQLGDVLHW+RQ V L+ GLLWGSIPLVGGIW ILFL IS+ ++YGYYAMILKVDEE+FG
Subjt:  MKDGKSMKVNSQLQ----QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASITLFLLMWTLIYSLGHF
        GH  LLQEGLFAS+TLFLL W L+YSL HF
Subjt:  GHGVLLQEGLFASITLFLLMWTLIYSLGHF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGGACGGGAAATCTATGAAAGTCAATTCTCAGTTGCAGCAGAATGGTCACTTGCCGCCCTTCAAATTGGCTAAGTTGTTCGATCCAGAGACTTCATGGGATAAGGA
TCAACTAGGAGATGTGTTGCATTGGATGAGACAATCAGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGG
TGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAGGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATA
ACACTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACATTTCTGA

mRNA sequence

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AAAAAGCAAAAGCTTGAAAGAGGAAAAAGGAAACAAAAAGCAAGCGAGAGAGGGGCTGTGTCGACATGTCGAAATATCAGTCGACATATCGAAATGGAGAAAAAACAAAA
GCGGCCGCCGGCCATGCGATCAAAGCACCAAAAAAGTTGTTCATGTTTTAGAGAGACATTTTGCTGACCCAATAATTTTCATTAGAAAATAAACACTACAGTTCCCAATT
CAGATTGAATCCAAATCTCATTAATTTTATTTTAGAAATTTTGAAATGGAGAGAGATTTACAGAAAGCCGTCTCCTGAATTTGTTTATACGATTTCCCTCAATTTCATGG
CGTTCTTGTTTTTTCCAAAGCCCTAGTAGTCAGTACCATTTCCCATCTTCTTACCTCTCCATATTCTTCACTGGGTATCTCGAATTTTCCCCCAATTTTTCGATTTCTGA
GCAGTCAGCATGAAGGACGGGAAATCTATGAAAGTCAATTCTCAGTTGCAGCAGAATGGTCACTTGCCGCCCTTCAAATTGGCTAAGTTGTTCGATCCAGAGACTTCATG
GGATAAGGATCAACTAGGAGATGTGTTGCATTGGATGAGACAATCAGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTCATCT
TATTCTTGGTGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAGGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTT
GCTTCCATAACACTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACATTTCTGATAATGGTTTTGTCATCGTTCGCAAAATCGGCCAAAGCATCGGTCGAGAGG
TTGGTTGCCATTGTTGCTTGCTCTTTTATTAGTGAATGTGCAGTCCCTTACTGTTATGGAGTGAAAACGCTTTTAGAAGTGGATTAATTTGATTAGGATTACAACTAACA
AAAGCTTAGAAATTATTGACTGTTAAATCCAATCCAATCCAATCCAATCTTAAATTAATAAAATCTTCATCAAAATGCCGTTCTTTTTCACTGC

Protein sequence

Show/hide protein sequence

MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASI
TLFLLMWTLIYSLGHF

CSPI01G23180 (gene) of Cucumber (PI 183967) v1 genome