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CSPI01G23980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G23980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein PSY3
Genome locationChr1:19423483..19424126
RNA-Seq ExpressionCSPI01G23980
SyntenyCSPI01G23980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031836.1 Protein PSY3 [Cucumis melo var. makuwa]3.1e-2078.38Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNN
        MDYSKAR  LALFLLLSF LV SARIIPHSENQEAAY+INDYPDPGANPRH P PP     EVSVVK   IK N
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNN
KAA0031838.1 hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa]1.2e-1974.67Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
        M+Y KARL +ALFLLLSFALV SARI+PHSENQEAAY+INDYPDPGANPRH P PP     E+SVVK   IK NP
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
KGN65816.1 hypothetical protein Csa_023196 [Cucumis sativus]2.0e-1973.68Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRP-PPPSRHSSEVSVVKSRLIKNNP
        MDYSKAR  LALFLLLSFAL  SARIIPHSENQEA Y++NDY DPGANPRH P PPP  HS EV+ V+ R I  NP
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRP-PPPSRHSSEVSVVKSRLIKNNP
TYJ97296.1 Protein PSY3 [Cucumis melo var. makuwa]6.9e-2077.33Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
        MDYSKAR  LALFLLLSF LVASARIIP+SEN EAAY+INDYPDPGANPRHRPPPPSR  S+VS+ K   I  +P
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
XP_011658636.1 protein PSY3 [Cucumis sativus]2.3e-3197.33Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
        MDYSKARL LALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKN P
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
TrEMBL top hitse value%identityAlignment
A0A0A0LV67 Uncharacterized protein4.4e-2075Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRP-PPPSRHSSEVSVVKSRLIKNNP
        MDYSKAR  L+L LLLSF LV SARIIPHSENQE AY+INDYPDPGANPRH P PPP RH  E+SVVK   I  NP
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRP-PPPSRHSSEVSVVKSRLIKNNP
A0A0A0LVJ6 Uncharacterized protein1.1e-3197.33Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
        MDYSKARL LALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKN P
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
A0A5A7SMH7 Uncharacterized protein5.7e-2074.67Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
        M+Y KARL +ALFLLLSFALV SARI+PHSENQEAAY+INDYPDPGANPRH P PP     E+SVVK   IK NP
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
A0A5A7SPC6 Protein PSY31.5e-2078.38Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNN
        MDYSKAR  LALFLLLSF LV SARIIPHSENQEAAY+INDYPDPGANPRH P PP     EVSVVK   IK N
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNN
A0A5D3BE66 Protein PSY33.4e-2077.33Show/hide
Query:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
        MDYSKAR  LALFLLLSF LVASARIIP+SEN EAAY+INDYPDPGANPRHRPPPPSR  S+VS+ K   I  +P
Subjt:  MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP
SwissProt top hitse value%identityAlignment
Q8S8P7 Protein PSY33.2e-0447.62Show/hide
Query:  SKARLGLALFLLLSFALVASARI-IPHSENQ-----EAAYVI--NDYPDPGANPRHRPPPPSR
        S +R+GL LFL  +FAL++SARI +  SEN+     E + ++  NDY DP AN RH PP   R
Subjt:  SKARLGLALFLLLSFALVASARI-IPHSENQ-----EAAYVI--NDYPDPGANPRHRPPPPSR
Arabidopsis top hitse value%identityAlignment
AT2G29995.1 unknown protein2.3e-0547.62Show/hide
Query:  SKARLGLALFLLLSFALVASARI-IPHSENQ-----EAAYVI--NDYPDPGANPRHRPPPPSR
        S +R+GL LFL  +FAL++SARI +  SEN+     E + ++  NDY DP AN RH PP   R
Subjt:  SKARLGLALFLLLSFALVASARI-IPHSENQ-----EAAYVI--NDYPDPGANPRHRPPPPSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATTCCAAAGCTCGTCTCGGTCTCGCCCTCTTCCTCTTGCTCTCGTTTGCCCTCGTTGCCTCGGCTCGGATCATACCCCATTCAGAAAACCAAGAAGCAGCTTA
TGTGATAAATGATTATCCTGATCCGGGAGCTAATCCAAGACATCGTCCACCACCACCATCACGACATTCGTCCGAAGTTAGCGTTGTCAAGAGTCGCCTCATCAAGAACA
ATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTTGTTCTATTCATAAATTCATTCAAAGTCACCTATTTTCAACGTAATAATAAACCTCCCATAGTTTCTTGGTTTCTCACTACCTAAATTTATATATATATACTGAT
TTCTTTACTTCATAATCTCCATCACCAATCATTCAAACCAAAGACAAAACAACAACTAGCATGGATTATTCCAAAGCTCGTCTCGGTCTCGCCCTCTTCCTCTTGCTCTC
GTTTGCCCTCGTTGCCTCGGCTCGGATCATACCCCATTCAGAAAACCAAGAAGCAGCTTATGTGATAAATGATTATCCTGATCCGGGAGCTAATCCAAGACATCGTCCAC
CACCACCATCACGACATTCGTCCGAAGTTAGCGTTGTCAAGAGTCGCCTCATCAAGAACAATCCCTAATGAAATTTTGCTTGTTTGAGGAGAAAGAAAGCATGAGCAAGG
AAACTTAAAAAGAGAAATAACCATGTACTACATGAACCAATAATAAACCAATAATAGCACTATATAAATGTTATATTATTGATTTTTATATAAATGCTATATTATTGATT
TATATAATTCCC
Protein sequenceShow/hide protein sequence
MDYSKARLGLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHSSEVSVVKSRLIKNNP