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CSPI01G24180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G24180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description6,7-dimethyl-8-ribityllumazine synthase
Genome locationChr1:19583843..19584497
RNA-Seq ExpressionCSPI01G24180
SyntenyCSPI01G24180
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036509.1 uncharacterized protein E6C27_scaffold6629G00010 [Cucumis melo var. makuwa]8.4e-7087.82Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPL AA+ILQANPGH+LTTPSS DHRLVRRVNILSP+SHLRRGGIYFLIPADHSD  HR  PAKKQ
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPES-------EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SSAVS  GVFPES       EDVIVLKKDKP RRDRRRSRSYGGAWQPHLHSISED
Subjt:  SSAVSGAGVFPES-------EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

XP_011658739.1 uncharacterized protein LOC105436080 [Cucumis sativus]4.8e-81100Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
Subjt:  SSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

XP_022949253.1 uncharacterized protein LOC111452664 [Cucurbita moschata]2.6e-5074.67Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSL HCLGC+LPCGALDLIRVVHLNG VQ FSPPL A +IL +NPGH+LTTPSS DH L+RR  +LSPQSHLRRG IYFLIPA  SD  HRKPP K  
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPESE-DVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SS  S A  FP+S  DVIVLKK K   R+RRRSRS GGAWQPHLHSISED
Subjt:  SSAVSGAGVFPESE-DVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

XP_022964962.1 uncharacterized protein LOC111464913 [Cucurbita moschata]1.5e-5069.87Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSL+HCLGC+LPCGALDLIRVVHLNG VQEFSPP+ AA+IL ANPGH+LTTPS   H LVR V ILSP+SHLRRGGIYFLIPA  SDH   +  AK  
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPE-------SEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SSA S   VFPE        EDVIV KK KP RRDRR SR+  GAW+PHL SI+ED
Subjt:  SSAVSGAGVFPE-------SEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

XP_038895775.1 uncharacterized protein LOC120083938 [Benincasa hispida]2.0e-5877.56Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSL++CLGCILPCGALDLIRVVHLNG VQEFSPPL+AA+IL ANPGH+LTTPSS DHRLVRRV ILSP+SHLRRGGIYFLIPAD SDH       +K 
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPES-------EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        +   SGAGVFPES       EDVIVLKK KP RRDRRRSRSYGG W+PHLHSISED
Subjt:  SSAVSGAGVFPES-------EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

TrEMBL top hitse value%identityAlignment
A0A0A0LYB2 Uncharacterized protein2.3e-81100Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
Subjt:  SSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

A0A5A7T586 Uncharacterized protein4.1e-7087.82Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPL AA+ILQANPGH+LTTPSS DHRLVRRVNILSP+SHLRRGGIYFLIPADHSD  HR  PAKKQ
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPES-------EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SSAVS  GVFPES       EDVIVLKKDKP RRDRRRSRSYGGAWQPHLHSISED
Subjt:  SSAVSGAGVFPES-------EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

A0A6J1GBI2 uncharacterized protein LOC1114526641.2e-5074.67Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSL HCLGC+LPCGALDLIRVVHLNG VQ FSPPL A +IL +NPGH+LTTPSS DH L+RR  +LSPQSHLRRG IYFLIPA  SD  HRKPP K  
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPESE-DVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SS  S A  FP+S  DVIVLKK K   R+RRRSRS GGAWQPHLHSISED
Subjt:  SSAVSGAGVFPESE-DVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

A0A6J1HJ26 uncharacterized protein LOC1114649137.3e-5169.87Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSL+HCLGC+LPCGALDLIRVVHLNG VQEFSPP+ AA+IL ANPGH+LTTPS   H LVR V ILSP+SHLRRGGIYFLIPA  SDH   +  AK  
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPE-------SEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SSA S   VFPE        EDVIV KK KP RRDRR SR+  GAW+PHL SI+ED
Subjt:  SSAVSGAGVFPE-------SEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

A0A6J1HZ69 uncharacterized protein LOC1114694381.2e-5069.87Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSL+HCLGC+LPCGALDLIRVVHLNG VQEFSPP+ AA+IL ANPGH+LTTPS   H LVR V ILSP+S+LRRGGIYFLIPA  SDH   +  AKK 
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  SSAVSGAGVFPE-------SEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED
        SSA S   VFPE        EDVIV KK KP RRDRR SR+  GAW+PHL SI+ED
Subjt:  SSAVSGAGVFPE-------SEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein7.0e-3044.97Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPAD--------HSDHGH
        MGNSL+ CL C+LPCGALDLIR+VHLNG V+E +  +TA +ILQANP H+L+ P S    +VR++ ILSP+S L+RG IYFLIP            D   
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPAD--------HSDHGH

Query:  RKPPAKKQSSAVSGAGVFPESEDVIVLKK-----------DKPRRRDRRRSRSYG-GAWQPHLHSISED
        RK   +  S+  +G  +  + E V + +K            K  R  RR SRS     W+P L SISED
Subjt:  RKPPAKKQSSAVSGAGVFPESEDVIVLKK-----------DKPRRRDRRRSRSYG-GAWQPHLHSISED

AT1G29195.1 unknown protein1.6e-2135.26Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSS----HDHRLV---RRVNILSPQSHLRRGGIYFLIPADHSDH---
        M  +++ C+ CILPCGALD+IR+VH NG V+E S  +TA++I++A+P H+L  PSS    HD R V    ++ I+ P++ L+RG IYFL+PA  SD    
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSS----HDHRLV---RRVNILSPQSHLRRGGIYFLIPADHSDH---

Query:  -GHRKPPAKKQSSAVSGAGVF-------------PESEDV------------------IVLKKDKPRRRDRRRSRSYGGAWQPHLHSISE
         G  +      ++ V     +              ES DV                   +L +    ++DRR+ R   G W+PHL SISE
Subjt:  -GHRKPPAKKQSSAVSGAGVF-------------PESEDV------------------IVLKKDKPRRRDRRRSRSYGGAWQPHLHSISE

AT2G30230.1 unknown protein4.5e-2943.82Show/hide
Query:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ
        MGNSL+ CL C+LPCGALDLIR+VHLNG V E + P+TA +ILQANP H+L+ P S    +VR++ ILSP+S L+RG IYFLIP D S    +K   +K+
Subjt:  MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQ

Query:  -----SSAVSGAGVFPES-------------------EDVIVLKK----DKPRRRDRRRSRSYG-GAWQPHLHSISED
                 SG  +  +                    EDV++ +K     K  R  R+ SRS     W+PHL SI+ED
Subjt:  -----SSAVSGAGVFPES-------------------EDVIVLKK----DKPRRRDRRRSRSYG-GAWQPHLHSISED

AT5G50090.1 unknown protein6.4e-0730.38Show/hide
Query:  CGALDLIRVV--HLNGLVQEFSPPLTAAQILQANPGH----------LLTTPSSHDHRL-VRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQS
        C A+D  RVV  H NG  ++ S P++A+ +++ NPGH          L +  S H   L + R+ +L P   L  G +Y LI       G       K  
Subjt:  CGALDLIRVV--HLNGLVQEFSPPLTAAQILQANPGH----------LLTTPSSHDHRL-VRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQS

Query:  SAVSGA-----------GVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISE
            G+               ++ED + +KK +  R   R SRS    WQP L SISE
Subjt:  SAVSGA-----------GVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISE

AT5G50090.2 unknown protein2.2e-0730.41Show/hide
Query:  CGALDLIRVV--HLNGLVQEFSPPLTAAQILQANPGH----------LLTTPSSHDHRL-VRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQS
        C A+D  RVV  H NG  ++ S P++A+ +++ NPGH          L +  S H   L + R+ +L P   L  G +Y LI       G       K  
Subjt:  CGALDLIRVV--HLNGLVQEFSPPLTAAQILQANPGH----------LLTTPSSHDHRL-VRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQS

Query:  SAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRS-YGGAWQPHLHSISE
            G+    + E V  +   K    D+ + RS    +WQP L SISE
Subjt:  SAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRS-YGGAWQPHLHSISE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCT
CACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACC
TCCGACGAGGCGGCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTC
CCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAG
TGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
CTCTTTTTGTGTTTTATTATATAAATCTAATCTTGTTTTCCTCTTCATATAATCTCTTCTCATCATCAGTTCTTCAAATTCGGTGTCGTCCTGGTGAAATGGGTAATAGT
TTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCA
GATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCG
GCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAG
GATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAGTT
AATTAATTAATACCGAGAAAACACCCTCCTATACACACACACATATGGTTGTTTTTTTAACCATATGGACTTTGACGGCGGCGGCCGATGAAGAGAGATGGGAAT
Protein sequenceShow/hide protein sequence
MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVF
PESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED