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CSPI01G24520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G24520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:19823281..19823553
RNA-Seq ExpressionCSPI01G24520
SyntenyCSPI01G24520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054012.1 hypothetical protein E6C27_scaffold318G00660 [Cucumis melo var. makuwa]1.4e-2787.34Show/hide
Query:  MANNNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
        MA NNN TTLTPS+QPSTPLTRFSAI PPRFSCASRP IQITLYTIYEEETEVK CQA SSS SSALS FRPL SVKCS
Subjt:  MANNNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
KAE8653296.1 hypothetical protein Csa_023338 [Cucumis sativus]9.4e-4098.9Show/hide
Query:  MSLRLIYPIAQEMANNNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
        MSLRLIYPIAQEMA NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
Subjt:  MSLRLIYPIAQEMANNNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
KAG6583881.1 hypothetical protein SDJN03_19813, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1656.07Show/hide
Query:  MSLRLIYPIAQEMANNNNT-TTLTP----SSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKIC-----------QAPSSSFSSALSCFRP
        MS RL+YPI+QEM NNNN+   + P    S Q S PLTRFSAIAPPR    SR  IQ+TL TIYE+E+E ++C           + PS S S+ALSCFRP
Subjt:  MSLRLIYPIAQEMANNNNT-TTLTP----SSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKIC-----------QAPSSSFSSALSCFRP

Query:  LRSVKCS
        LRS+KCS
Subjt:  LRSVKCS
TrEMBL top hitse value%identityAlignment
A0A0A0M102 Uncharacterized protein1.1e-33100Show/hide
Query:  NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
        NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
Subjt:  NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
A0A5D3DAX8 Uncharacterized protein6.8e-2887.34Show/hide
Query:  MANNNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
        MA NNN TTLTPS+QPSTPLTRFSAI PPRFSCASRP IQITLYTIYEEETEVK CQA SSS SSALS FRPL SVKCS
Subjt:  MANNNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTAAGGCTCATATATCCCATCGCACAGGAAATGGCCAACAACAACAACACCACCACCCTAACTCCTTCCTCCCAACCATCCACACCGCTAACCCGATTTTCAGC
GATTGCGCCGCCGCGCTTCAGCTGCGCTTCGAGACCCCATATTCAAATTACTCTGTACACCATTTATGAAGAAGAAACTGAGGTCAAAATTTGCCAGGCTCCTTCTTCCT
CTTTCTCCTCGGCTCTCTCTTGCTTTCGTCCACTTCGATCAGTGAAATGTTCT
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTAAGGCTCATATATCCCATCGCACAGGAAATGGCCAACAACAACAACACCACCACCCTAACTCCTTCCTCCCAACCATCCACACCGCTAACCCGATTTTCAGC
GATTGCGCCGCCGCGCTTCAGCTGCGCTTCGAGACCCCATATTCAAATTACTCTGTACACCATTTATGAAGAAGAAACTGAGGTCAAAATTTGCCAGGCTCCTTCTTCCT
CTTTCTCCTCGGCTCTCTCTTGCTTTCGTCCACTTCGATCAGTGAAATGTTCT
Protein sequenceShow/hide protein sequence
MSLRLIYPIAQEMANNNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSFSSALSCFRPLRSVKCS