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CSPI01G24530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G24530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationChr1:19834734..19835415
RNA-Seq ExpressionCSPI01G24530
SyntenyCSPI01G24530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054015.1 hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa]2.8e-3691.3Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSS--AAAINSKYFLDQVPVPLGPFSIFEH
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRE+L SSS FKIDKFSV SPPSP SS  AAA+NSKYFLDQVPVPLGPFSIFEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSS--AAAINSKYFLDQVPVPLGPFSIFEH

KAG6583880.1 hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1980Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSV--------PSPPSPDSSAA
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED REAL SSS  KIDKFSV         SPPSP +SAA
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSV--------PSPPSPDSSAA

KAG7019500.1 hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2274.16Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSV--------PSPPSPDSSAAAINSKYFLDQVPVP
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED REAL SSS  KIDKFSV         SPPSP +++AA++SKYFL+Q   P
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSV--------PSPPSPDSSAAAINSKYFLDQVPVP

KGN65872.1 hypothetical protein Csa_023250 [Cucumis sativus]3.2e-4097.78Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSSAAAINSKYFLDQVPVPLGPFSIFEH
        MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEEDQREALVSSS FKIDKFSVPSPPSPDSSAAAINSKYFLDQVPVPLGPFSIFEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSSAAAINSKYFLDQVPVPLGPFSIFEH

PQP93653.1 hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora]3.2e-1153.93Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------REALVSSSHFKIDKFSVPSPPS-----PDSSAAAINSKYFLDQV
        M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE++       ++L+SSS FK    S  SPPS       ++AA   SKYFL +V
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------REALVSSSHFKIDKFSVPSPPS-----PDSSAAAINSKYFLDQV

TrEMBL top hitse value%identityAlignment
A0A0A0LYE6 Uncharacterized protein1.6e-4097.78Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSSAAAINSKYFLDQVPVPLGPFSIFEH
        MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEEDQREALVSSS FKIDKFSVPSPPSPDSSAAAINSKYFLDQVPVPLGPFSIFEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSSAAAINSKYFLDQVPVPLGPFSIFEH

A0A314XQS6 Uncharacterized protein1.5e-1153.93Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------REALVSSSHFKIDKFSVPSPPS-----PDSSAAAINSKYFLDQV
        M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE++       ++L+SSS FK    S  SPPS       ++AA   SKYFL +V
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------REALVSSSHFKIDKFSVPSPPS-----PDSSAAAINSKYFLDQV

A0A5A7UJX7 Uncharacterized protein1.4e-3691.3Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSS--AAAINSKYFLDQVPVPLGPFSIFEH
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRE+L SSS FKIDKFSV SPPSP SS  AAA+NSKYFLDQVPVPLGPFSIFEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSS--AAAINSKYFLDQVPVPLGPFSIFEH

A0A5E4FYK5 PREDICTED: galactosyltransferase family2.6e-1150.51Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------REALVSSSHFKIDKFSVPSPPS-----PDSSAAAINSKYFLDQVPVPLGPFSIFEH
        A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE++       ++L+SSS  K    S PSPPS       ++AA   S+YFL +V      FS+F H
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------REALVSSSHFKIDKFSVPSPPS-----PDSSAAAINSKYFLDQVPVPLGPFSIFEH

A0A6J5WYZ3 Uncharacterized protein2.0e-1153.12Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQR------EALVSSSHFKIDKFSVPSPPS--PDSSAAAINSKYFLDQVPVPLGPFSIFEH
        A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE++       ++L+SSS  K    S  SPPS    S+AA  +SKYFL +V      FS+F H
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQR------EALVSSSHFKIDKFSVPSPPS--PDSSAAAINSKYFLDQVPVPLGPFSIFEH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)7.5e-1143.75Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREAL--VSSSHFKIDK----FSVPSPPSPDSSAAAINSKYFLDQVPVP--LGPFSIFEH
        ATSRLARFI+E  PPQFV+VMRRR+ KVLDTI EE++      +  S F   K    F+ P   S  S++A+ +    L++ PV    G F +F++
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREAL--VSSSHFKIDK----FSVPSPPSPDSSAAAINSKYFLDQVPVP--LGPFSIFEH

AT4G21060.1 Galactosyltransferase family protein8.6e-0763.41Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDQRE
        ATSRLARF+SE  PPQFV+VMRR   + + LDTI EE+ +E
Subjt:  ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDQRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACTTCTCGATTGGCCAGGTTTATCAGCGAAGCTTGCCCACCTCAATTCGTCTCTGTCATGAGGCGAAGAAGCCCCAAAGTTTTAGACACCATTAACGAAGA
AGACCAAAGAGAAGCCTTAGTTTCCTCTTCCCACTTCAAGATCGACAAATTCTCTGTTCCTTCACCGCCATCTCCCGATTCTTCCGCTGCCGCCATTAATTCCAAATACT
TTCTCGATCAGGTCCCTGTACCCCTGGGGCCTTTCTCCATTTTCGAGCATTGA
mRNA sequenceShow/hide mRNA sequence
ACAACCAAAAATCCTCTTCCACAAAAACAGAAATCGTATTGCCTTCTTCGTAATCCTCTTCATTCAACATTCGAAACCCTAAATTTCATAAAGATGGCAGCCACTTCTCG
ATTGGCCAGGTTTATCAGCGAAGCTTGCCCACCTCAATTCGTCTCTGTCATGAGGCGAAGAAGCCCCAAAGTTTTAGACACCATTAACGAAGAAGACCAAAGAGAAGCCT
TAGTTTCCTCTTCCCACTTCAAGATCGACAAATTCTCTGTTCCTTCACCGCCATCTCCCGATTCTTCCGCTGCCGCCATTAATTCCAAATACTTTCTCGATCAGGTCCCT
GTACCCCTGGGGCCTTTCTCCATTTTCGAGCATTGAGAAATGGATTTTTAGTTTCGATGAGTACACTCAGAATCCGTTTCTTTTTTCCTTTTTACCTTTTCTGCGCCCAT
CGGGTCGGATTCATTCTGGCCGGAAATGGCGTTGTAGATATGAAGTCGACGACGTAGTGGCTGACGCCGGTTAAGAGATGGGTTTTTTCTTTGGTTTTTTTTCTCTTTTT
TTTTTGATGGGGTTAGTGAATTTCCGAATGCGTTTGTAATGTGTGAGTTTGATGTTTATATAAAATGAAAAAACTGCGCTGCCCTTCTAATAATTAACTTTTCAGCTAAT
CCTCAAAATCATAAATAACAAT
Protein sequenceShow/hide protein sequence
MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQREALVSSSHFKIDKFSVPSPPSPDSSAAAINSKYFLDQVPVPLGPFSIFEH