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CSPI01G24990 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G24990
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein
Genome locationChr1:20425801..20426959
RNA-Seq ExpressionCSPI01G24990
SyntenyCSPI01G24990
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583852.1 hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4975.5Show/hide
Query:  SQIPSIAA----ALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRG
        S+I ++AA      ++ LA  SNARDLRPSEHGL+YQNP AI +SSP MQSFF+GNSWS+SDVALPKAMNTSLP QW NR+HR+RSGA+A    GDHIRG
Subjt:  SQIPSIAA----ALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRG

Query:  ALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
        ALLVASLVCG+IGVSLL+ASAFIY FKFRKQ+R SSSS+SVSETTNIIANK
Subjt:  ALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK

XP_008445240.1 PREDICTED: uncharacterized protein LOC103488324 [Cucumis melo]4.7e-6085.44Show/hide
Query:  MAIPVSQIPSIA------AALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADG
        MAI  S IPS A      A +ILLLA LSNARDLRPSEHGLDYQNPDAI +SSPQMQSFF+GNSWSNSDVALPKAMNTSLPPQW NR+HRNRSGASAA G
Subjt:  MAIPVSQIPSIA------AALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADG

Query:  DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR--SSSSSVSVSETTNIIANK
        DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR  SSSSS+S SETTNIIANK
Subjt:  DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR--SSSSSVSVSETTNIIANK

XP_011659106.1 uncharacterized protein LOC105436136 [Cucumis sativus]3.1e-72100Show/hide
Query:  MAIPVSQIPSIAAALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGA
        MAIPVSQIPSIAAALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGA
Subjt:  MAIPVSQIPSIAAALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGA

Query:  LLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
        LLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
Subjt:  LLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK

XP_022927447.1 uncharacterized protein LOC111434271 [Cucurbita moschata]1.3e-4975.5Show/hide
Query:  SQIPSIAA----ALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRG
        S+I ++AA      ++ LA  SNARDLRPSEHGL+YQNP AI +SSP MQSFF+GNSWS+SDVALPKAMNTSLP QW NR+HR+RSGA+A    GDHIRG
Subjt:  SQIPSIAA----ALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRG

Query:  ALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
        ALLVASLVCG+IGVSLL+ASAFIY FKFRKQ+R SSSS+SVSETTNIIANK
Subjt:  ALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK

XP_038895122.1 uncharacterized protein LOC120083432 [Benincasa hispida]1.7e-5478.85Show/hide
Query:  MAIPVSQIPSIAAAL----ILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADG
        MA   SQIPS AA      ++LLA +SNARDLRPSEHGL+YQNP A+ +SSPQMQSFF+GNSWS+SDVALPKAMNTSLPPQW NR+HRNRSGA+A    G
Subjt:  MAIPVSQIPSIAAAL----ILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADG

Query:  DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
        DHIRGALLVASLVCGIIG+SLL+ASAFIYFFKFRKQSR SSSS+SVSETTNII NK
Subjt:  DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK

TrEMBL top hitse value%identityAlignment
A0A0A0LVV5 Uncharacterized protein1.5e-72100Show/hide
Query:  MAIPVSQIPSIAAALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGA
        MAIPVSQIPSIAAALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGA
Subjt:  MAIPVSQIPSIAAALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGA

Query:  LLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
        LLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
Subjt:  LLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK

A0A1S3BC63 uncharacterized protein LOC1034883242.3e-6085.44Show/hide
Query:  MAIPVSQIPSIA------AALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADG
        MAI  S IPS A      A +ILLLA LSNARDLRPSEHGLDYQNPDAI +SSPQMQSFF+GNSWSNSDVALPKAMNTSLPPQW NR+HRNRSGASAA G
Subjt:  MAIPVSQIPSIA------AALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADG

Query:  DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR--SSSSSVSVSETTNIIANK
        DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR  SSSSS+S SETTNIIANK
Subjt:  DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR--SSSSSVSVSETTNIIANK

A0A5D3C2L6 Uncharacterized protein2.3e-6085.44Show/hide
Query:  MAIPVSQIPSIA------AALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADG
        MAI  S IPS A      A +ILLLA LSNARDLRPSEHGLDYQNPDAI +SSPQMQSFF+GNSWSNSDVALPKAMNTSLPPQW NR+HRNRSGASAA G
Subjt:  MAIPVSQIPSIA------AALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADG

Query:  DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR--SSSSSVSVSETTNIIANK
        DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR  SSSSS+S SETTNIIANK
Subjt:  DHIRGALLVASLVCGIIGVSLLVASAFIYFFKFRKQSR--SSSSSVSVSETTNIIANK

A0A6J1EH69 uncharacterized protein LOC1114342716.2e-5075.5Show/hide
Query:  SQIPSIAA----ALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRG
        S+I ++AA      ++ LA  SNARDLRPSEHGL+YQNP AI +SSP MQSFF+GNSWS+SDVALPKAMNTSLP QW NR+HR+RSGA+A    GDHIRG
Subjt:  SQIPSIAA----ALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRG

Query:  ALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
        ALLVASLVCG+IGVSLL+ASAFIY FKFRKQ+R SSSS+SVSETTNIIANK
Subjt:  ALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK

A0A6J1KLE3 uncharacterized protein LOC1114952328.9e-4974.83Show/hide
Query:  SQIPSIAA----ALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRG
        S+I + AA      ++ LA  SNARDLRPSEHGL+YQNP AI +SSP MQSFF+GNSWS+SDVALPKAMNTSLP QW NR+HR+RS A+A    GDHIRG
Subjt:  SQIPSIAA----ALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRG

Query:  ALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK
        ALLVASLVCG+IGVSLL+ASAFIY FKFRKQ+R SSSS+SVSETTNIIANK
Subjt:  ALLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein6.8e-0934.72Show/hide
Query:  SQIPSIAAALILLLAALS----NARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRG-A
        S+ P + + LI+ +  L     NAR+LRPS+HGL+Y         S +M SFF G   SN   ++    ++ LP   S      ++ +   D D +    
Subjt:  SQIPSIAAALILLLAALS----NARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRG-A

Query:  LLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETT
        L+V SLVCG+ GV+L+VASA IYF  + K   SS +   +   T
Subjt:  LLVASLVCGIIGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETT

AT4G21740.1 unknown protein7.3e-1133.08Show/hide
Query:  SQIPSIAAALILLLAALSNARDLRPSEHGLDYQ---NPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGALL
        S I  +    +++    S A +LRPS+HGL YQ    P   HS   +M+SFF  +  S+   + P+ +  +      +     R GA       +R   L
Subjt:  SQIPSIAAALILLLAALSNARDLRPSEHGLDYQ---NPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGALL

Query:  VASLVCGIIGVSLLVASAFIYFFKFRKQSRSSS
         AS++CG+ GV+LLV    IYFF++RK + S+S
Subjt:  VASLVCGIIGVSLLVASAFIYFFKFRKQSRSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCCCGTGTCTCAGATTCCCTCCATCGCCGCCGCCCTCATTCTTCTCCTCGCCGCACTCTCCAATGCCAGAGACCTCCGTCCATCAGAGCACGGCTTGGACTA
CCAAAACCCTGACGCTATCCACAGCTCCTCTCCTCAGATGCAGTCCTTCTTCAGAGGTAACTCCTGGTCCAACTCTGATGTCGCTCTTCCCAAGGCCATGAACACTTCCC
TCCCCCCACAGTGGTCCAATCGTGCCCATCGCAACCGCTCTGGAGCCTCCGCTGCGGATGGAGATCACATTCGCGGCGCATTGCTTGTCGCCAGTTTGGTATGTGGAATT
ATTGGCGTTTCTTTGCTGGTTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAGATCGTCGTCGTCGTCGGTCTCTGTCTCAGAAACTACTAACATTAT
TGCTAACAAGTGA
mRNA sequenceShow/hide mRNA sequence
CTCTACAACAATAATATGACAAAGCGAAAATCCGACGTCGTTTAACTTTTCCCCTTCCCTTCCTCCATTCCATCATAAAACCAACTGCGCCTTTCCTTACCCTTCTCTTT
CACAGATAAAATCAATATTCAACCACACACCAACCAAAACCAAATGGCCATTCCCGTGTCTCAGATTCCCTCCATCGCCGCCGCCCTCATTCTTCTCCTCGCCGCACTCT
CCAATGCCAGAGACCTCCGTCCATCAGAGCACGGCTTGGACTACCAAAACCCTGACGCTATCCACAGCTCCTCTCCTCAGATGCAGTCCTTCTTCAGAGGTAACTCCTGG
TCCAACTCTGATGTCGCTCTTCCCAAGGCCATGAACACTTCCCTCCCCCCACAGTGGTCCAATCGTGCCCATCGCAACCGCTCTGGAGCCTCCGCTGCGGATGGAGATCA
CATTCGCGGCGCATTGCTTGTCGCCAGTTTGGTATGTGGAATTATTGGCGTTTCTTTGCTGGTTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAGAT
CGTCGTCGTCGTCGGTCTCTGTCTCAGAAACTACTAACATTATTGCTAACAAGTGATTGTGATGAGGAATTTGCATGTACATATAGACGACTGTACTGAGATGAGATCTG
GTGGCTGTGTTCCGCCTGATATGATCTTATTTTGATTTGCTTCTTCTTTGATTGAATTTTTGGTGTTGCAGAGTGGAATTAATGTGTTTAGTGCTGATTTTGGAGATTAG
ATCTTCTTCTTTCAGACATTCTAAATCAGATTAATTATTTTGGCAATTATATTTGATGCGACAGATTTGGATTCCATTGAATTGAATAACGTTGAAATATTAAATTAGAG
AGGGAGAGGAATGGAGTTGAGAGTGTTTAGAAGAAGTAAGACAAAAAAGATGGGGGGAAGCAGTCTCCGACTCTCAAATTCCATGTGTATTTCTCTCTCTCTTATCCCCA
CCAATTTGATATGATATCATATTGCTTTGAGTTTTAGAAATTTGAGCTTTGAAGAGAAGTAGGTAAGTAAAGGTAGAGAGTGAGTGTGAGAGAGACAAAGGGACTGATTG
ATTCTCAATTCCCAAGTGATAACTTTTGTATTCTTATATCTATAAACTATTATCATCAA
Protein sequenceShow/hide protein sequence
MAIPVSQIPSIAAALILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSDVALPKAMNTSLPPQWSNRAHRNRSGASAADGDHIRGALLVASLVCGI
IGVSLLVASAFIYFFKFRKQSRSSSSSVSVSETTNIIANK