| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004141524.1 30-kDa cleavage and polyadenylation specificity factor 30 [Cucumis sativus] | 3.4e-158 | 68.56 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPA-------LSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
DSEG+LSFDFEGGLDA TNP A +SSL ++ SDSSAPPA LS L +++ EP GAP N+G RRSFRQTVCRHWLRSLCMKGDACGF+HQY
Subjt: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPA-------LSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
Query: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPP +EEI+QKIQHL V ++NE
Subjt: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
Query: -----TIRKGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
+ +G+ G I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFD
Subjt: -----TIRKGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
Query: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
SADNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGT HYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPS+GEQLASLLYL
Subjt: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
Query: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
EPDGELMAVS+AAESKR++EKAKGVNPDIG+ENPDIV F
Subjt: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| XP_008445183.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30 [Cucumis melo] | 1.8e-167 | 72.67 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNP---TVAPSSSLHLVPSDSSAPPALSNFLPSS----LTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
DSEG+LSFDFEGGLDA TNP A SSSL L+PSDSSAPP LSN LP S L PEPLGAPTAN+GTRRSFRQTVCRHWLRSLCMKGDACGF+HQY
Subjt: DSEGILSFDFEGGLDAVLTNP---TVAPSSSLHLVPSDSSAPPALSNFLPSS----LTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
Query: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPPSVEEI+QKIQHL V ++NE
Subjt: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
Query: --------------------------------------TIRKGMNGV--------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
I+ NG I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFD
Subjt: --------------------------------------TIRKGMNGV--------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
Query: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
SADNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGTAHYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPSIGEQLASLLYL
Subjt: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
Query: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
EPDGELMAVSIAAESKR++EKAKGVNPDIGNENPDIV F
Subjt: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| XP_008459517.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30-like [Cucumis melo] | 5.2e-159 | 69.93 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPP---ALSNFLPSSLTP----EPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
DSEG+LSFDFEGGLDA TNP A +SSL L+ SDSSAPP A+SN L +L P EP GAP N+G RRSFRQTVCRHWLRSLCMKGDACGF+HQY
Subjt: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPP---ALSNFLPSSLTP----EPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
Query: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNETIR-
DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPP VEEI+QKIQHL V ++NE +
Subjt: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNETIR-
Query: --------KGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
+G+ G I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFD
Subjt: --------KGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
Query: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
+ADNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGTAHYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPSIGEQLASLLYL
Subjt: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
Query: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
EPDGELMAVSIAAESKR++EKAKGVNPDIG+ENPDIV F
Subjt: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| XP_011648522.2 LOW QUALITY PROTEIN: 30-kDa cleavage and polyadenylation specificity factor 30, partial [Cucumis sativus] | 5.6e-177 | 75.34 | Show/hide |
Query: STLFFVDSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYD
S+ DSEG+LSFDFEGGLDAVLTNPTVAPSSSL LVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGF+HQYD
Subjt: STLFFVDSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYD
Query: KSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE-----
SRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NGSDCRYRHAKLPGPPPSVEEI+QKIQHL V ++NE
Subjt: KSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE-----
Query: -------------------------------------TIRKGMNGV--------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDS
IR NG I RYFIVKSCN ENLE +GV ATQRSNEAKLNEAFDS
Subjt: -------------------------------------TIRKGMNGV--------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDS
Query: ADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLE
ADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYG+ LKWLKL ELSFQKTRHLRNTYNE+LP+KISRDCQELEPSIGEQLASLLYLE
Subjt: ADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLE
Query: PDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
PDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
Subjt: PDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| XP_038894441.1 30-kDa cleavage and polyadenylation specificity factor 30-like [Benincasa hispida] | 1.2e-163 | 71.4 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNP-TVAPSSSLHLVPSDSSAPPALSNFLPSSL----TPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDK
DS+G+LSFDFEGGLDA TNP A +SSL L+ SDSSAPPALSN +P L TPE GAPT N G+RRSFRQTVCRHWLRSLCMKGDACGF+HQYDK
Subjt: DSEGILSFDFEGGLDAVLTNP-TVAPSSSLHLVPSDSSAPPALSNFLPSSL----TPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDK
Query: SRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL-------ENVLSLRR-------NE------
SRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPPSVEEI+QKIQH+ N L L+R NE
Subjt: SRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL-------ENVLSLRR-------NE------
Query: ---TIRKGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSA
+ +G+ G I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFDSA
Subjt: ---TIRKGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSA
Query: DNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEP
DNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGTAHYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPSIGEQLASLLYLEP
Subjt: DNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEP
Query: DGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
DGELMAVSIAAE+KR++EKAKGVNPDIGNENPDIV F
Subjt: DGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KSR6 Uncharacterized protein | 1.6e-158 | 68.56 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPA-------LSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
DSEG+LSFDFEGGLDA TNP A +SSL ++ SDSSAPPA LS L +++ EP GAP N+G RRSFRQTVCRHWLRSLCMKGDACGF+HQY
Subjt: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPA-------LSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
Query: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPP +EEI+QKIQHL V ++NE
Subjt: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
Query: -----TIRKGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
+ +G+ G I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFD
Subjt: -----TIRKGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
Query: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
SADNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGT HYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPS+GEQLASLLYL
Subjt: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
Query: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
EPDGELMAVS+AAESKR++EKAKGVNPDIG+ENPDIV F
Subjt: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| A0A1S3BC28 30-kDa cleavage and polyadenylation specificity factor 30 | 8.7e-168 | 72.67 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNP---TVAPSSSLHLVPSDSSAPPALSNFLPSS----LTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
DSEG+LSFDFEGGLDA TNP A SSSL L+PSDSSAPP LSN LP S L PEPLGAPTAN+GTRRSFRQTVCRHWLRSLCMKGDACGF+HQY
Subjt: DSEGILSFDFEGGLDAVLTNP---TVAPSSSLHLVPSDSSAPPALSNFLPSS----LTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
Query: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPPSVEEI+QKIQHL V ++NE
Subjt: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
Query: --------------------------------------TIRKGMNGV--------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
I+ NG I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFD
Subjt: --------------------------------------TIRKGMNGV--------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
Query: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
SADNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGTAHYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPSIGEQLASLLYL
Subjt: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
Query: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
EPDGELMAVSIAAESKR++EKAKGVNPDIGNENPDIV F
Subjt: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| A0A1S3CAV8 30-kDa cleavage and polyadenylation specificity factor 30-like | 2.5e-159 | 69.93 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPP---ALSNFLPSSLTP----EPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
DSEG+LSFDFEGGLDA TNP A +SSL L+ SDSSAPP A+SN L +L P EP GAP N+G RRSFRQTVCRHWLRSLCMKGDACGF+HQY
Subjt: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPP---ALSNFLPSSLTP----EPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
Query: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNETIR-
DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPP VEEI+QKIQHL V ++NE +
Subjt: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNETIR-
Query: --------KGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
+G+ G I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFD
Subjt: --------KGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
Query: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
+ADNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGTAHYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPSIGEQLASLLYL
Subjt: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
Query: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
EPDGELMAVSIAAESKR++EKAKGVNPDIG+ENPDIV F
Subjt: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| A0A5D3C2W1 30-kDa cleavage and polyadenylation specificity factor 30 | 8.7e-168 | 72.67 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNP---TVAPSSSLHLVPSDSSAPPALSNFLPSS----LTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
DSEG+LSFDFEGGLDA TNP A SSSL L+PSDSSAPP LSN LP S L PEPLGAPTAN+GTRRSFRQTVCRHWLRSLCMKGDACGF+HQY
Subjt: DSEGILSFDFEGGLDAVLTNP---TVAPSSSLHLVPSDSSAPPALSNFLPSS----LTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
Query: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPPSVEEI+QKIQHL V ++NE
Subjt: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL--------------ENVLSLRRNE----
Query: --------------------------------------TIRKGMNGV--------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
I+ NG I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFD
Subjt: --------------------------------------TIRKGMNGV--------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
Query: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
SADNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGTAHYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPSIGEQLASLLYL
Subjt: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
Query: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
EPDGELMAVSIAAESKR++EKAKGVNPDIGNENPDIV F
Subjt: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| A0A6J1CE78 30-kDa cleavage and polyadenylation specificity factor 30 | 2.6e-156 | 68.11 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPS-------SLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
D EG+LSFDFEGGLDA TNP ++SL L+ SD SAPPA S S ++T E GA T N+G+RRSFRQTVCRHWLRSLCMKGDACGF+HQY
Subjt: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPS-------SLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQY
Query: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHLENVLSLRRNE------------------
DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFC NG DCRYRHAKLPGPPP VEEI+QKIQHL + N+
Subjt: DKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHLENVLSLRRNE------------------
Query: -----TIRKGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
T+ +G+ G I RYFIVKSCN ENLELSVQQGV ATQRSNEAKLNEAFD
Subjt: -----TIRKGMNGV-----------------------------------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFD
Query: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
SADNVILIFSVNRTRHFQGCA MMSRIGGSVSGGNWKYAHGTAHYGQ F LKWLKL ELSFQKTRHLRN YNE+LP+KISRDCQELEPSIGEQLASLLYL
Subjt: SADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYL
Query: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
EPDGELMAVS+AAESKR++EKAKGVNPDIG+ENPDIV F
Subjt: EPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A9LNK9 30-kDa cleavage and polyadenylation specificity factor 30 | 1.0e-133 | 60.95 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDKSRMPI
D++G LSFDFEGGLD + V ++S+ + P ++S+ A+ N P T + A A G RSFRQTVCRHWLR LCMKGDACGF+HQ+DK+RMPI
Subjt: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDKSRMPI
Query: CRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL-------------ENV-------------------
CRFFRLYGECREQDCVYKHTNEDIKECNMYK GFC NG DCRYRHAKLPGPPP VEE++QKIQ L NV
Subjt: CRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL-------------ENV-------------------
Query: ----LSLRRNETIRKGMNGV----------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQG
L ++ + ++ + V + RYF+VKS N EN ELSVQQGV ATQRSNEAKLNEAFDS +NVILIFSVNRTRHFQG
Subjt: ----LSLRRNETIRKGMNGV----------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQG
Query: CANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGELMAVSIAAESKRKD
CA M SRIGG + GGNWK+ HGTA YG+ F +KWLKL ELSF KTR+LRN YNE+LP+KISRDCQELEPS+GEQLASLLYLEPD ELMA+SIAAE+KR++
Subjt: CANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGELMAVSIAAESKRKD
Query: EKAKGVNPDIGNENPDIVLF
EKAKGVNP+ ENPDIV F
Subjt: EKAKGVNPDIGNENPDIVLF
|
|
| B2RR83 3'-5' RNA helicase YTHDC2 | 2.3e-24 | 46.15 | Show/hide |
Query: LRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQ
+RYFI+KS N NLE+S Q+G+ +T SNE KLN AF + V L+FSV + HFQG + M S IG S +W G+A G +F ++W++ L FQ
Subjt: LRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQ
Query: KTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGE
HL N +N++ ++ISRD QELEP +GEQL L P GE
Subjt: KTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGE
|
|
| Q0DA50 Zinc finger CCCH domain-containing protein 45 | 5.1e-117 | 52.14 | Show/hide |
Query: EGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDKSRMPICR
+G LSFDFEGGLD P + P+ S+ P P G G R S+RQTVCRHWLR LCMKG+ACGF+HQ+DK+RMP+CR
Subjt: EGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDKSRMPICR
Query: FFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKI----------QHLENVLSLR--------------------
FFR +GECRE DC YKH+ +D+KECNMYK GFC NG +CRY+H KLPGPPP VEE++QKI QH N + +
Subjt: FFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKI----------QHLENVLSLR--------------------
Query: ---------------------------------------RNETIRKGMNGVI--------------LRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLN
N+ ++ NG RYFIVKSCN ENLE+SVQQG+ ATQRSNEAKLN
Subjt: ---------------------------------------RNETIRKGMNGVI--------------LRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLN
Query: EAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLAS
EAF+S +NVILIFS+NRTR+FQGCA M SRIGG + GGNWK AHGTAHYG+ F ++WLKL ELSFQKT HLRN YN++LP+KISRDCQELEP IGEQLAS
Subjt: EAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLAS
Query: LLYLEPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
LLYLEPD EL A+ IAAE+K+++EKAKGV+ D +N DIVLF
Subjt: LLYLEPDGELMAVSIAAESKRKDEKAKGVNPDIGNENPDIVLF
|
|
| Q5R746 3'-5' RNA helicase YTHDC2 | 3.0e-24 | 46.15 | Show/hide |
Query: LRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQ
+RYFI+KS N NLE+S Q+G+ +T SNE KLN AF + V L+FSV + HFQG + M S IG S +W G+A G +F ++W++ L FQ
Subjt: LRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQ
Query: KTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGE
HL N +N++ ++ISRD QELEP +GEQL L P GE
Subjt: KTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGE
|
|
| Q9H6S0 3'-5' RNA helicase YTHDC2 | 6.7e-24 | 46.15 | Show/hide |
Query: LRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQ
+RYFI+KS N NLE+S Q+G+ +T SNE KLN AF + V L+FSV + HFQG + M S IG S +W G+A G +F ++W++ L FQ
Subjt: LRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQ
Query: KTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGE
HL N +N++ ++ISRD QELEP +GEQL L P GE
Subjt: KTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGE
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G30460.1 cleavage and polyadenylation specificity factor 30 | 7.3e-135 | 60.95 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDKSRMPI
D++G LSFDFEGGLD + V ++S+ + P ++S+ A+ N P T + A A G RSFRQTVCRHWLR LCMKGDACGF+HQ+DK+RMPI
Subjt: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDKSRMPI
Query: CRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL-------------ENV-------------------
CRFFRLYGECREQDCVYKHTNEDIKECNMYK GFC NG DCRYRHAKLPGPPP VEE++QKIQ L NV
Subjt: CRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL-------------ENV-------------------
Query: ----LSLRRNETIRKGMNGV----------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQG
L ++ + ++ + V + RYF+VKS N EN ELSVQQGV ATQRSNEAKLNEAFDS +NVILIFSVNRTRHFQG
Subjt: ----LSLRRNETIRKGMNGV----------------------ILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQG
Query: CANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGELMAVSIAAESKRKD
CA M SRIGG + GGNWK+ HGTA YG+ F +KWLKL ELSF KTR+LRN YNE+LP+KISRDCQELEPS+GEQLASLLYLEPD ELMA+SIAAE+KR++
Subjt: CANMMSRIGGSVSGGNWKYAHGTAHYGQIFLLKWLKLRELSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLLYLEPDGELMAVSIAAESKRKD
Query: EKAKGVNPDIGNENPDIVLF
EKAKGVNP+ ENPDIV F
Subjt: EKAKGVNPDIGNENPDIVLF
|
|
| AT1G30460.2 cleavage and polyadenylation specificity factor 30 | 3.5e-60 | 67.88 | Show/hide |
Query: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDKSRMPI
D++G LSFDFEGGLD + V ++S+ + P ++S+ A+ N P T + A A G RSFRQTVCRHWLR LCMKGDACGF+HQ+DK+RMPI
Subjt: DSEGILSFDFEGGLDAVLTNPTVAPSSSLHLVPSDSSAPPALSNFLPSSLTPEPLGAPTANLGTRRSFRQTVCRHWLRSLCMKGDACGFIHQYDKSRMPI
Query: CRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL
CRFFRLYGECREQDCVYKHTNEDIKECNMYK GFC NG DCRYRHAKLPGPPP VEE++QKIQ L
Subjt: CRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCLNGSDCRYRHAKLPGPPPSVEEIIQKIQHL
|
|
| AT4G11970.1 YTH family protein | 3.9e-27 | 49.29 | Show/hide |
Query: GVILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAH-YGQIFLLKWLKLRE
G RYFI+KS N +N+++SV++G+ ATQ NE L AF + VILIFSVN + FQG A M+S +G W G + +G+ F +KWL+L E
Subjt: GVILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAH-YGQIFLLKWLKLRE
Query: LSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLL
L FQKT HL+N N+ P+KISRDCQEL IGE L LL
Subjt: LSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLL
|
|
| AT4G11970.2 YTH family protein | 3.9e-27 | 49.29 | Show/hide |
Query: GVILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAH-YGQIFLLKWLKLRE
G RYFI+KS N +N+++SV++G+ ATQ NE L AF + VILIFSVN + FQG A M+S +G W G + +G+ F +KWL+L E
Subjt: GVILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAH-YGQIFLLKWLKLRE
Query: LSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLL
L FQKT HL+N N+ P+KISRDCQEL IGE L LL
Subjt: LSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLL
|
|
| AT4G11970.3 YTH family protein | 3.9e-27 | 49.29 | Show/hide |
Query: GVILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAH-YGQIFLLKWLKLRE
G RYFI+KS N +N+++SV++G+ ATQ NE L AF + VILIFSVN + FQG A M+S +G W G + +G+ F +KWL+L E
Subjt: GVILRYFIVKSCN-ENLELSVQQGVCATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCANMMSRIGGSVSGGNWKYAHGTAH-YGQIFLLKWLKLRE
Query: LSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLL
L FQKT HL+N N+ P+KISRDCQEL IGE L LL
Subjt: LSFQKTRHLRNTYNEDLPIKISRDCQELEPSIGEQLASLL
|
|
