CuGenDBv2

Gene ID	CSPI01G25260
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	twinkle homolog protein, chloroplastic/mitochondrial isoform X1
Genome location	Chr1:20718150..20725487
RNA-Seq Expression	CSPI01G25260
Synteny	CSPI01G25260
Gene Ontology terms	GO:0006260 - DNA replication (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0003697 - single-stranded DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0043139 - 5'-3' DNA helicase activity (molecular function)
InterPro domains	IPR006171 - TOPRIM domain IPR007694 - DNA helicase, DnaB-like, C-terminal IPR027032 - Twinkle-like protein IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK05076.1 twinkle-like protein [Cucumis melo var. makuwa]

5.0e-157

88.85

Show/hide

Query:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE
        Q +K+Q+LWNCK+YLNKA RIILATDGDTPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLF FKDYFHE
Subjt:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE

Query:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM
        IDAYYHKKFG EFGVPTGW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCS+ENKV EH RKLLEKH+KKPFF GRYGGSVERM
Subjt:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM

Query:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        SVEELEQGKQWL+DTFF+LR E  SL SISWVLDLAKAAVLRHGVSGLVIDPY+ELDHQRLPNQ+ETEYVSQMLT+VK+FA H+ CH+WFVAHP Q
Subjt:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

XP_008445781.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucumis melo]

5.0e-157

88.85

Show/hide

Query:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE
        Q +K+Q+LWNCK+YLNKA RIILATDGDTPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLF FKDYFHE
Subjt:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE

Query:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM
        IDAYYHKKFG EFGVPTGW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCS+ENKV EH RKLLEKH+KKPFF GRYGGSVERM
Subjt:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM

Query:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        SVEELEQGKQWL+DTFF+LR E  SL SISWVLDLAKAAVLRHGVSGLVIDPY+ELDHQRLPNQ+ETEYVSQMLT+VK+FA H+ CH+WFVAHP Q
Subjt:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

XP_011659233.2 twinkle homolog protein, chloroplastic/mitochondrial [Cucumis sativus]

9.7e-161

91.16

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Query:  RKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEID
        +KFQ+LWNCKDYLNKA RIILATDGDTPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEID
Subjt:  RKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEID

Query:  AYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSV
        AYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNAS GWKFALCS+ENKV EH RKLLEKHIKKPFF GRYGGSVER+S 
Subjt:  AYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSV

Query:  EELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        EELEQGKQWL+DTFF+LR E  SL SISWVLDLAKAAVLRHGVSGLVIDPY+ELDHQRLPNQ+ETEYVSQMLT+VK+FAQH+ CH+WFVAHP Q
Subjt:  EELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

XP_011659237.2 twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]

3.7e-176

99.32

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Query:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE
        QARKFQYLWNC+DYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE
Subjt:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE

Query:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM
        IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM
Subjt:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM

Query:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACH+WFVAHPMQ
Subjt:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

XP_031736080.1 twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]

3.7e-176

99.32

Show/hide

Query:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE
        QARKFQYLWNC+DYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE
Subjt:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE

Query:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM
        IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM
Subjt:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM

Query:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACH+WFVAHPMQ
Subjt:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY49 SF4 helicase domain-containing protein

2.1e-185

99.03

Show/hide

Query:  MGSYCGQARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRF
        MGSYCGQARKFQYLWNC+DYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRF
Subjt:  MGSYCGQARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRF

Query:  KDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYG
        KDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYG
Subjt:  KDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYG

Query:  GSVERMSVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHP
        GSVERMSVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPY+ELDHQRLPNQSETEYVSQMLTEVKQFAQHNACH+WFVAHP
Subjt:  GSVERMSVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHP

Query:  MQNKYTRLLD
        MQNKYTRLLD
Subjt:  MQNKYTRLLD

A0A0A0LYM8 Uncharacterized protein

4.7e-161

91.16

Show/hide

Query:  RKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEID
        +KFQ+LWNCKDYLNKA RIILATDGDTPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEID
Subjt:  RKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEID

Query:  AYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSV
        AYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNAS GWKFALCS+ENKV EH RKLLEKHIKKPFF GRYGGSVER+S 
Subjt:  AYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSV

Query:  EELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        EELEQGKQWL+DTFF+LR E  SL SISWVLDLAKAAVLRHGVSGLVIDPY+ELDHQRLPNQ+ETEYVSQMLT+VK+FAQH+ CH+WFVAHP Q
Subjt:  EELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

A0A1S3BDI3 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

2.4e-157

88.85

Show/hide

Query:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE
        Q +K+Q+LWNCK+YLNKA RIILATDGDTPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLF FKDYFHE
Subjt:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE

Query:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM
        IDAYYHKKFG EFGVPTGW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCS+ENKV EH RKLLEKH+KKPFF GRYGGSVERM
Subjt:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM

Query:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        SVEELEQGKQWL+DTFF+LR E  SL SISWVLDLAKAAVLRHGVSGLVIDPY+ELDHQRLPNQ+ETEYVSQMLT+VK+FA H+ CH+WFVAHP Q
Subjt:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

A0A5D3C3S4 Twinkle-like protein

2.4e-157

88.85

Show/hide

Query:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE
        Q +K+Q+LWNCK+YLNKA RIILATDGDTPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLF FKDYFHE
Subjt:  QARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE

Query:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM
        IDAYYHKKFG EFGVPTGW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCS+ENKV EH RKLLEKH+KKPFF GRYGGSVERM
Subjt:  IDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERM

Query:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        SVEELEQGKQWL+DTFF+LR E  SL SISWVLDLAKAAVLRHGVSGLVIDPY+ELDHQRLPNQ+ETEYVSQMLT+VK+FA H+ CH+WFVAHP Q
Subjt:  SVEELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

A0A6J1CKU2 twinkle homolog protein, chloroplastic/mitochondrial isoform X2

9.8e-151

86.01

Show/hide

Query:  KFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDA
        K+QYLWNCK+YL+KA RIILATDGD PGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAEL+PI GLF FKDYF EIDA
Subjt:  KFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDA

Query:  YYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVE
        YY KKFGNEFG  TGW+ LN LYNVVPGELTIVTG+PNSGKSEWIDALLCNLNASVGWKF LCS+ENKV EHARKLLEK IKKPFF  RYG SVERMS E
Subjt:  YYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVE

Query:  ELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        ELE GKQWLNDTFF++RCEN+SL SI+WVLDLAKAAVLRHGV+GLVIDPY+ELDHQR PNQ+ETEYVSQMLT+VK+FAQH+ACH+WFVAHP Q
Subjt:  ELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

SwissProt top hits

e value

%identity

Alignment

B5X582 Twinkle homolog protein, chloroplastic/mitochondrial

3.0e-133

73.04

Show/hide

Query:  KFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDA
        K+++LWNC DYL KA RI++ATDGD PGQA+AEEIARR+GKERCWRVKWPKK E +HFKDANEVLM  GP  LKE + +AE YPI GLF FKD+F EIDA
Subjt:  KFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDA

Query:  YYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVE
        YY +  G+E+GV TGW+ L++LY+VVPGELT+VTG+PNSGKSEWIDA+LCNLN SVGWKFALCS+ENKV +HARKLLEKHIKKPFF   YG SV+RMSVE
Subjt:  YYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVE

Query:  ELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        E ++GK+WLNDTF+ +RCE  SL SI WVL+ AKAAVLR+G+ GLVIDPY+ELDHQR P Q+ETEYVSQMLT++K+F+QH++CH+WFVAHP Q
Subjt:  ELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

F4I6E6 Primase homolog protein

6.8e-32

72.62

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Query:  FQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPI
        F+Y+WNC DYL KA RI++ATDGD PGQALAEE+ARR+GKERCW VKWPKK E +HFKDANEVLM  GP  LKE + NAE YP+
Subjt:  FQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPI

Arabidopsis top hits

e value

%identity

Alignment

AT1G30660.1 nucleic acid binding;nucleic acid binding

4.8e-33

72.62

Show/hide

Query:  FQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPI
        F+Y+WNC DYL KA RI++ATDGD PGQALAEE+ARR+GKERCW VKWPKK E +HFKDANEVLM  GP  LKE + NAE YP+
Subjt:  FQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPI

AT1G30680.1 toprim domain-containing protein

2.2e-134

73.04

Show/hide

Query:  KFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDA
        K+++LWNC DYL KA RI++ATDGD PGQA+AEEIARR+GKERCWRVKWPKK E +HFKDANEVLM  GP  LKE + +AE YPI GLF FKD+F EIDA
Subjt:  KFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDA

Query:  YYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVE
        YY +  G+E+GV TGW+ L++LY+VVPGELT+VTG+PNSGKSEWIDA+LCNLN SVGWKFALCS+ENKV +HARKLLEKHIKKPFF   YG SV+RMSVE
Subjt:  YYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVE

Query:  ELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ
        E ++GK+WLNDTF+ +RCE  SL SI WVL+ AKAAVLR+G+ GLVIDPY+ELDHQR P Q+ETEYVSQMLT++K+F+QH++CH+WFVAHP Q
Subjt:  ELEQGKQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTAGTTACTGTGGGCAGGCCAGAAAGTTTCAGTATCTATGGAACTGCAAAGACTACTTGAACAAGGCCTTGCGTATTATACTTGCTACTGATGGGGATACGCCTGG
TCAAGCTTTAGCAGAGGAGATTGCACGCCGTGTTGGGAAGGAAAGATGTTGGAGGGTCAAATGGCCAAAAAAGGATGAGGTCGATCATTTCAAAGATGCAAATGAGGTTT
TGATGTACTTGGGCCCTGAGGCCCTGAAGGAAGTTGTTGACAACGCAGAGTTGTATCCTATAAGTGGATTATTTCGCTTCAAAGACTACTTCCACGAGATTGATGCATAT
TATCACAAAAAATTTGGAAATGAGTTTGGTGTGCCGACTGGATGGAGGTGTCTCAATGATTTGTACAATGTTGTCCCAGGGGAGCTTACCATTGTTACTGGTGTTCCGAA
TTCAGGCAAAAGTGAGTGGATTGATGCTCTGCTATGCAATCTTAATGCAAGTGTTGGTTGGAAATTTGCTCTCTGCTCTATAGAAAATAAGGTTGGAGAACATGCAAGAA
AACTACTGGAGAAACACATCAAGAAGCCTTTCTTTGGTGGACGTTATGGTGGCTCTGTTGAACGAATGAGTGTTGAGGAGTTGGAGCAAGGCAAGCAATGGCTAAACGAT
ACATTTTTTATTTTAAGGTGTGAAAATAAGTCCCTCCGAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTTCTGGACTGGTAATTGA
CCCTTATGATGAGCTTGACCATCAACGGCTTCCAAATCAAAGCGAAACAGAGTATGTGAGCCAGATGCTTACAGAGGTCAAACAGTTTGCTCAACATAATGCTTGCCATA
TTTGGTTCGTTGCACATCCTATGCAGAACAAGTACACAAGATTGTTGGATTAG

mRNA sequence

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Protein sequence

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MGSYCGQARKFQYLWNCKDYLNKALRIILATDGDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAY
YHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVEELEQGKQWLND
TFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEYVSQMLTEVKQFAQHNACHIWFVAHPMQNKYTRLLD

CSPI01G25260 (gene) of Cucumber (PI 183967) v1 genome