; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G25370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G25370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like
Genome locationChr1:20849130..20850376
RNA-Seq ExpressionCSPI01G25370
SyntenyCSPI01G25370
Gene Ontology termsGO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006936 - ALOG domain
IPR040222 - ALOG family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583821.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. sororia]8.3e-7275.98Show/hide
Query:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ
        MSAAVAAAAAAAL+RR+SSSSSSSTT  RSSS SFYS YYPS SVSVR  PL SRY+C KR DW++FRQYLRSRCPTLSL+ C+G+++VEFL YLD+ G 
Subjt:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ

Query:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        +K+H  TCPNFGHRYPVDPYCDCPTQQPW ++  LI RLRVAFEENGGNPVTNPFN VDVK+YL+++K SQ  SRGIDR
Subjt:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

KAG7019447.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-7275.98Show/hide
Query:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ
        MSAAVAAAAAAAL+RR+SSSSSSSTT  RSSS SFYS YYPS SVSVR  PL SRY+C KR DW++FRQYLRSRCPTLSL+ C+G+++VEFL YLD+ G 
Subjt:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ

Query:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        +K+H  TCPNFGHRYPVDPYCDCPTQQPW ++  LI RLRVAFEENGGNPVTNPFN VDVK+YL+++K SQ  SRGIDR
Subjt:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

XP_004135751.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis sativus]2.3e-9096.65Show/hide
Query:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ
        MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSR PTLSLACCSGSNVVEFLSYLD+LGQ
Subjt:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ

Query:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        SKIHGATCP+FGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTV VKVYLN VK SQETSRGIDR
Subjt:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

XP_008459123.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucumis melo]6.1e-8388.83Show/hide
Query:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ
        MSAAVAAAAAAAL RRTSS+S      T SSSDSFYSHYYPS SVSVRP PL+SRY+CLKRRDWNRFRQYLRSRCPTLSLACCSG+NVVEFL YLD+LGQ
Subjt:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ

Query:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        SKIHGATCPNFG RYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLN+VK SQE SRGIDR
Subjt:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

XP_038894791.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Benincasa hispida]3.7e-8084.92Show/hide
Query:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ
        MSAAVAAAAAAALSRR  SSS+++TT TRS S+SFY+ YYPSVSVSVRP PL SRY+CLKRRDWNRFRQYLR+RCPTLSLACCSG+NVVEFL YLD+LGQ
Subjt:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ

Query:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        +K+H ATCPNFGH YPVDPYC+CPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVK+YLN+VK SQ+ SRGIDR
Subjt:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

TrEMBL top hitse value%identityAlignment
A0A0A0LY69 ALOG domain-containing protein1.1e-9096.65Show/hide
Query:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ
        MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSR PTLSLACCSGSNVVEFLSYLD+LGQ
Subjt:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ

Query:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        SKIHGATCP+FGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTV VKVYLN VK SQETSRGIDR
Subjt:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

A0A1S3C9J9 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like3.0e-8388.83Show/hide
Query:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ
        MSAAVAAAAAAAL RRTSS+S      T SSSDSFYSHYYPS SVSVRP PL+SRY+CLKRRDWNRFRQYLRSRCPTLSLACCSG+NVVEFL YLD+LGQ
Subjt:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ

Query:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        SKIHGATCPNFG RYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLN+VK SQE SRGIDR
Subjt:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

A0A5D3E452 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like3.0e-8388.83Show/hide
Query:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ
        MSAAVAAAAAAAL RRTSS+S      T SSSDSFYSHYYPS SVSVRP PL+SRY+CLKRRDWNRFRQYLRSRCPTLSLACCSG+NVVEFL YLD+LGQ
Subjt:  MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQ

Query:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        SKIHGATCPNFG RYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLN+VK SQE SRGIDR
Subjt:  SKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

A0A6J1EH11 protein G1-like69.9e-7175.56Show/hide
Query:  MSAAV-AAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLG
        MSAAV AAAAAAAL+RR+SSSSSSSTT  RSSS SFYS YYPS SVSVR  PL SRY+C KR DW++FRQYLRSRCPTLSL+ C+G+++VEFL YLD+ G
Subjt:  MSAAV-AAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLG

Query:  QSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
         +K+H  TCPNFGHRYPVDPYCDCPTQQPW ++  LI RLRVAFEENGGNPVTNPFN VDVK+YL+++K SQ  SRGIDR
Subjt:  QSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

A0A6J1KGB9 protein G1-like61.1e-6975.69Show/hide
Query:  MSAAV-AAAAAAALSRR-TSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQL
        MSAAV AAAAAAAL+RR +SSSSSSSTT  RSSS SFYS YYPS SVSVR  PL SRY+C KR DW++FRQYLRSRCPTLSLA C+G+++VEFL YLD+ 
Subjt:  MSAAV-AAAAAAALSRR-TSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQL

Query:  GQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR
        G +K+H  TCPNFGHRYPVDPYCDCPTQQPW ++  LI RLRVAFEENGGNPVTNPFN VDVK+YL+++K SQ  SRGIDR
Subjt:  GQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR

SwissProt top hitse value%identityAlignment
A2XVI8 Protein G1-like49.0e-3753.19Show/hide
Query:  SHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALI
        S+  PS+       P  SRY+  KRRDWN F QYLR+  P LSLA CSG++V+EFL YLDQ G++K+H A CP FGH  P  P C CP +Q W +L AL+
Subjt:  SHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALI

Query:  GRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI
        GRLR AFEENGG P +NPF    V++YL  V+  Q  +RG+
Subjt:  GRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI

B8AH02 Protein G1-like34.5e-3656.45Show/hide
Query:  SRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTN
        SRY+  KRRDWN F QYLR+  P L LA CSG++V+EFL YLDQ G++K+H A CP FGH  P  P C CP +Q W +L AL+GRLR AFEENGG P +N
Subjt:  SRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTN

Query:  PFNTVDVKVYLNNVKVSQETSRGI
        PF    V++YL  V+  Q  +RG+
Subjt:  PFNTVDVKVYLNNVKVSQETSRGI

Q0DZF3 Protein G1-like34.5e-3656.45Show/hide
Query:  SRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTN
        SRY+  KRRDWN F QYLR+  P L LA CSG++V+EFL YLDQ G++K+H A CP FGH  P  P C CP +Q W +L AL+GRLR AFEENGG P +N
Subjt:  SRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTN

Query:  PFNTVDVKVYLNNVKVSQETSRGI
        PF    V++YL  V+  Q  +RG+
Subjt:  PFNTVDVKVYLNNVKVSQETSRGI

Q7XRS1 Protein G1-like49.0e-3753.19Show/hide
Query:  SHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALI
        S+  PS+       P  SRY+  KRRDWN F QYLR+  P LSLA CSG++V+EFL YLDQ G++K+H A CP FGH  P  P C CP +Q W +L AL+
Subjt:  SHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALI

Query:  GRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI
        GRLR AFEENGG P +NPF    V++YL  V+  Q  +RG+
Subjt:  GRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI

Q9LMK2 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 68.1e-3853.28Show/hide
Query:  PSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLR
        P  S    P    SRY+  KRRDWN F QYL++  P L+L+ CSG++V+EFL YLDQ G++K+H A CP FGH+ P  P C CP +Q W +L ALIGRLR
Subjt:  PSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLR

Query:  VAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI
         A+EENGG P +NPF    V++YL  V+ SQ  +RGI
Subjt:  VAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI

Arabidopsis top hitse value%identityAlignment
AT1G07090.1 Protein of unknown function (DUF640)5.8e-3953.28Show/hide
Query:  PSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLR
        P  S    P    SRY+  KRRDWN F QYL++  P L+L+ CSG++V+EFL YLDQ G++K+H A CP FGH+ P  P C CP +Q W +L ALIGRLR
Subjt:  PSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLR

Query:  VAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI
         A+EENGG P +NPF    V++YL  V+ SQ  +RGI
Subjt:  VAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI

AT2G31160.1 Protein of unknown function (DUF640)1.5e-3448.75Show/hide
Query:  SSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPV
        S++SSS T  T   +          +S S  P    SRY+  KRRDWN F QYLR+  P LSL+ CSG++V+EFL YLDQ G++K+H   C  +GH  P 
Subjt:  SSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPV

Query:  DPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI
         P C CP +Q W +L ALIGRLR AFEENGG P TNPF    V++YL  V+  Q  +RG+
Subjt:  DPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI

AT3G04510.1 Protein of unknown function (DUF640)1.1e-3453.54Show/hide
Query:  PLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNP
        P  SRY+  KRRDWN F QYLR+  P LSLA CSG++V++FL YLDQ G++K+H   C  FG   P  P C CP +Q W +L ALIGRLR A+EENGG P
Subjt:  PLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNP

Query:  VTNPFNTVDVKVYLNNVKVSQETSRGI
         T+PF +  V+++L  V+  Q  SRG+
Subjt:  VTNPFNTVDVKVYLNNVKVSQETSRGI

AT3G23290.2 Protein of unknown function (DUF640)2.7e-3650.3Show/hide
Query:  AAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATC
        AAAA +  TSSSSSSS+  + ++                     +SRY+  KRRDWN F QYLR+  P LSL+ CSG++V+EFL YLDQ G++K+H   C
Subjt:  AAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATC

Query:  PNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI
        P FGH  P  P C CP +Q W +L ALIGRLR AFEENGG+P TNPF    V++YL  V+ SQ  +RGI
Subjt:  PNFGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI

AT5G28490.1 Protein of unknown function (DUF640)3.3e-3451.09Show/hide
Query:  PSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLR
        P+ S  + P P  SRY+  KRRDWN F QYLR+  P LSL  CSG++V+EFL YLDQ G++K+H   C  FG   P  P C CP +Q W +L ALIGRLR
Subjt:  PSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPNFGHRYPVDPYCDCPTQQPWTTLVALIGRLR

Query:  VAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI
         A+EENGG P  NPF +  V+++L  V+  Q  +RG+
Subjt:  VAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCCGCCGTCGCTGCCGCTGCCGCCGCTGCCCTCTCCCGTCGAACCTCCTCCTCATCCTCTTCCTCCACCACCATCACCCGTTCCTCCTCCGATTCTTTCTACTC
CCACTACTACCCCTCCGTTTCCGTGTCGGTTCGACCACAGCCATTGGTCAGCCGCTACGACTGCCTCAAACGTCGTGACTGGAATAGGTTCCGCCAGTACCTGAGAAGCC
GCTGTCCGACATTGAGCCTCGCCTGTTGCAGTGGATCGAATGTCGTCGAGTTTCTCTCTTATCTCGACCAACTAGGGCAGAGTAAAATTCATGGCGCCACCTGCCCTAAT
TTCGGCCACCGTTACCCGGTGGATCCTTACTGCGATTGCCCAACTCAACAGCCCTGGACTACTCTCGTTGCTCTCATCGGCCGACTCCGTGTCGCGTTTGAGGAAAACGG
CGGAAATCCAGTGACGAATCCATTTAACACCGTCGACGTCAAAGTTTATCTCAACAATGTTAAGGTTTCTCAAGAAACATCCCGAGGAATTGATCGGTAA
mRNA sequenceShow/hide mRNA sequence
CCCCCCCATTTCTCTTCTTTCCCTTTATATTCTCTTCACCTTCTCTCCCTCTTCCCTCACTTTCTTTTCATTTTTCCCTCACCTTCTTCTTCTTCTTCTTCTTCTCCTCC
TCTCTTCCCCATTTTTCCAAACAATAACTCTCTGCCTTTTCCTTGCCATGTCAGCCGCCGTCGCTGCCGCTGCCGCCGCTGCCCTCTCCCGTCGAACCTCCTCCTCATCC
TCTTCCTCCACCACCATCACCCGTTCCTCCTCCGATTCTTTCTACTCCCACTACTACCCCTCCGTTTCCGTGTCGGTTCGACCACAGCCATTGGTCAGCCGCTACGACTG
CCTCAAACGTCGTGACTGGAATAGGTTCCGCCAGTACCTGAGAAGCCGCTGTCCGACATTGAGCCTCGCCTGTTGCAGTGGATCGAATGTCGTCGAGTTTCTCTCTTATC
TCGACCAACTAGGGCAGAGTAAAATTCATGGCGCCACCTGCCCTAATTTCGGCCACCGTTACCCGGTGGATCCTTACTGCGATTGCCCAACTCAACAGCCCTGGACTACT
CTCGTTGCTCTCATCGGCCGACTCCGTGTCGCGTTTGAGGAAAACGGCGGAAATCCAGTGACGAATCCATTTAACACCGTCGACGTCAAAGTTTATCTCAACAATGTTAA
GGTTTCTCAAGAAACATCCCGAGGAATTGATCGGTAAGAAAAAGAAAGGGATTAAGGATGAAAATTGAATTTGCTCTGCTATATTCGACGCCGAGCTCGGTGTGTATGGC
GGATTCTGAACAATCATCGACGCAACTGACGTGAAAAATTTGAAGACTGTGAGGAGTTTTGGATATATTTGGATTAAAAGGATTTGATGACACTCCCAAGAAGAATTTAA
CTGATAAAAATGCTTAATTTTGGGGTTTTTTTTTTTTGTACAAATTAAAGAACTTCTAGTGGCTTATAGTGGAAATGGACTGTTGGGATTGAGAATATTTAGAGAAAGAA
AAAATGGGTTTGTTGATTTCTTTGTTTGTATTAAAATAAAATTAGTGAATTGAAGTGGAAATTAAAATTTGATGAAATGGGTATTGTTTTTGTTATAAATTTGTGTAAAG
AGTAAAGAGGATTGATTGTGCTTTATTTAGGTCATGATGTGAATTGAAGTTGGGGATAAAAGAAAAAGAAATTCCTTTGATTATGAAAAAGGAAGATAAGAAAAATGGTA
AAAGAATTAGATGGTGGATTCCAGAATACTTTCTTCC
Protein sequenceShow/hide protein sequence
MSAAVAAAAAAALSRRTSSSSSSSTTITRSSSDSFYSHYYPSVSVSVRPQPLVSRYDCLKRRDWNRFRQYLRSRCPTLSLACCSGSNVVEFLSYLDQLGQSKIHGATCPN
FGHRYPVDPYCDCPTQQPWTTLVALIGRLRVAFEENGGNPVTNPFNTVDVKVYLNNVKVSQETSRGIDR