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CSPI01G25400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G25400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:20886923..20887618
RNA-Seq ExpressionCSPI01G25400
SyntenyCSPI01G25400
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043344.1 hypothetical protein E6C27_scaffold110G002580 [Cucumis melo var. makuwa]9.0e-8192.68Show/hide
Query:  MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK
        MIP+MQKV SFT+FLTSDPSPFPSLLL+LLIFTFHI KCRFFSYHHFP LPLFYYNCVGNHKILCNPIP SSPRRLPSGGWALRAAPIALLVVVSWLSQK
Subjt:  MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK

Query:  ESAGVAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
        ESAGVAARKW SQG  VSTISEHKAE EEIGGCTPWVLVG+IVLLFNMAQRQALIRHCLFVRSM
Subjt:  ESAGVAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
KAE8653331.1 hypothetical protein Csa_023242 [Cucumis sativus]1.2e-88100Show/hide
Query:  MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK
        MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK
Subjt:  MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK

Query:  ESAGVAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
        ESAGVAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
Subjt:  ESAGVAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
KAG6573437.1 hypothetical protein SDJN03_27324, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5469.51Show/hide
Query:  MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK
        MIPIM K+SS TH LTSDPSPFPSLLLLLLIFT HI  CRFFSY      P  YY+C G    LCNP+ +SSP+RLP GGW+LR APIALLVVVSWL++K
Subjt:  MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK

Query:  ESAGVAARKWRSQGFRVSTI---SEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFV
        ++ GVAAR W S+   V TI    +H+ E E IGGCTPWVLVGMI+LLFNMAQRQALIRHCLFV
Subjt:  ESAGVAARKWRSQGFRVSTI---SEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFV
TrEMBL top hitse value%identityAlignment
A0A0A0LW23 Uncharacterized protein9.0e-87100Show/hide
Query:  MQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQKESAG
        MQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQKESAG
Subjt:  MQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQKESAG

Query:  VAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
        VAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
Subjt:  VAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
A0A5A7TJ52 Uncharacterized protein4.3e-8192.68Show/hide
Query:  MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK
        MIP+MQKV SFT+FLTSDPSPFPSLLL+LLIFTFHI KCRFFSYHHFP LPLFYYNCVGNHKILCNPIP SSPRRLPSGGWALRAAPIALLVVVSWLSQK
Subjt:  MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQK

Query:  ESAGVAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
        ESAGVAARKW SQG  VSTISEHKAE EEIGGCTPWVLVG+IVLLFNMAQRQALIRHCLFVRSM
Subjt:  ESAGVAARKWRSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCAATAATGCAAAAAGTCTCATCTTTTACACATTTTCTTACTTCTGATCCCTCACCCTTCCCTTCCCTTCTCCTTCTCCTCCTCATCTTCACCTTCCATATCTC
CAAATGTCGTTTCTTCTCTTACCACCATTTTCCATTGCTGCCTCTTTTCTATTACAATTGTGTTGGCAACCATAAGATACTCTGCAATCCCATTCCAATATCCAGTCCTA
GAAGATTGCCTTCTGGTGGTTGGGCTTTACGAGCAGCACCAATCGCCTTGCTCGTGGTCGTGAGTTGGTTGAGTCAGAAGGAATCAGCAGGAGTTGCTGCCAGGAAGTGG
CGGTCTCAGGGCTTCCGTGTTTCGACCATTTCAGAACACAAGGCAGAGTATGAAGAAATTGGTGGTTGTACTCCTTGGGTTCTTGTGGGAATGATAGTACTACTATTCAA
TATGGCTCAACGGCAGGCACTCATTCGGCACTGCTTGTTTGTAAGAAGTATGTGA
mRNA sequenceShow/hide mRNA sequence
GTTAATCAATCGATCCTCCACCTCCTTAACATAACCGTCAAATTACAGTTGGAATTTCAAACCTTAATTTACCCAAAACCTCTCATCTCCTATCAGAATTTCAACTTTTG
ATGAAGCATTTCCCTCTAGTCTCATGATTCCAATAATGCAAAAAGTCTCATCTTTTACACATTTTCTTACTTCTGATCCCTCACCCTTCCCTTCCCTTCTCCTTCTCCTC
CTCATCTTCACCTTCCATATCTCCAAATGTCGTTTCTTCTCTTACCACCATTTTCCATTGCTGCCTCTTTTCTATTACAATTGTGTTGGCAACCATAAGATACTCTGCAA
TCCCATTCCAATATCCAGTCCTAGAAGATTGCCTTCTGGTGGTTGGGCTTTACGAGCAGCACCAATCGCCTTGCTCGTGGTCGTGAGTTGGTTGAGTCAGAAGGAATCAG
CAGGAGTTGCTGCCAGGAAGTGGCGGTCTCAGGGCTTCCGTGTTTCGACCATTTCAGAACACAAGGCAGAGTATGAAGAAATTGGTGGTTGTACTCCTTGGGTTCTTGTG
GGAATGATAGTACTACTATTCAATATGGCTCAACGGCAGGCACTCATTCGGCACTGCTTGTTTGTAAGAAGTATGTGAATGATCGGCTCTACATGGTTAAAGAAAGAAAA
GAACTAAAAGAAGTGGGCTGGTAGAGACTGATCGAC
Protein sequenceShow/hide protein sequence
MIPIMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHISKCRFFSYHHFPLLPLFYYNCVGNHKILCNPIPISSPRRLPSGGWALRAAPIALLVVVSWLSQKESAGVAARKW
RSQGFRVSTISEHKAEYEEIGGCTPWVLVGMIVLLFNMAQRQALIRHCLFVRSM