CuGenDBv2

Gene ID	CSPI01G25720
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	sister-chromatid cohesion protein 3 isoform X2
Genome location	Chr1:21126652..21135217
RNA-Seq Expression	CSPI01G25720
Synteny	CSPI01G25720
Gene Ontology terms	GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR039662 - Cohesin subunit Scc3/SA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050970.1 sister-chromatid cohesion protein 3 isoform X2 [Cucumis melo var. makuwa]

2.6e-139

96.34

Show/hide

Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIP IFLEAMKRAYHRHTVELS NSDGPST KSFLECRELAARLSGTYVGAARNKHRLDILKIVK
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK

Query:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK
        DGIEHAFSD PKNLSFLEC ILHFVSKLSTPDILEIIK VQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN+QGK
Subjt:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK

Query:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RLFDEQSTSEEEESISASDHEDVHDEEKQDEED EEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAG PST
Subjt:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

TYK10316.1 sister-chromatid cohesion protein 3 isoform X2 [Cucumis melo var. makuwa]

2.6e-139

96.34

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Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIP IFLEAMKRAYHRHTVELS NSDGPST KSFLECRELAARLSGTYVGAARNKHRLDILKIVK
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK

Query:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK
        DGIEHAFSD PKNLSFLEC ILHFVSKLSTPDILEIIK VQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN+QGK
Subjt:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK

Query:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RLFDEQSTSEEEESISASDHEDVHDEEKQDEED EEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAG PST
Subjt:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

XP_008450503.1 PREDICTED: sister-chromatid cohesion protein 3 isoform X2 [Cucumis melo]

3.0e-140

96.7

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Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIP IFLEAMKRAYHRHTVELS NSDGPST KSFLECRELAARLSGTYVGAARNKHRLDILKIVK
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK

Query:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK
        DGIEHAFSD PKNLSFLEC ILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN+QGK
Subjt:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK

Query:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RLFDEQSTSEEEESISASDHEDVHDEEKQDEED EEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAG PST
Subjt:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

XP_011659512.1 sister-chromatid cohesion protein 3 [Cucumis sativus]

1.7e-146

99.63

Show/hide

Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK

Query:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK
        DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK
Subjt:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK

Query:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
Subjt:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

XP_016900979.1 PREDICTED: sister-chromatid cohesion protein 3 isoform X1 [Cucumis melo]

1.1e-137

92.96

Show/hide

Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKR-----------AYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARN
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIP IFLEAMKR           AYHRHTVELS NSDGPST KSFLECRELAARLSGTYVGAARN
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKR-----------AYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARN

Query:  KHRLDILKIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRG
        KHRLDILKIVKDGIEHAFSD PKNLSFLEC ILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRG
Subjt:  KHRLDILKIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRG

Query:  RPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RPRKKHN+QGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEED EEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAG PST
Subjt:  RPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M1E7 Uncharacterized protein

2.7e-158

100

Show/hide

Query:  MIIIGGVGAEEPCNVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTY
        MIIIGGVGAEEPCNVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTY
Subjt:  MIIIGGVGAEEPCNVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTY

Query:  VGAARNKHRLDILKIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGN
        VGAARNKHRLDILKIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGN
Subjt:  VGAARNKHRLDILKIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGN

Query:  STRRRGRPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        STRRRGRPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
Subjt:  STRRRGRPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

A0A1S3BQ10 sister-chromatid cohesion protein 3 isoform X2

1.5e-140

96.7

Show/hide

Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIP IFLEAMKRAYHRHTVELS NSDGPST KSFLECRELAARLSGTYVGAARNKHRLDILKIVK
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK

Query:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK
        DGIEHAFSD PKNLSFLEC ILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN+QGK
Subjt:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK

Query:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RLFDEQSTSEEEESISASDHEDVHDEEKQDEED EEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAG PST
Subjt:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

A0A1S4DYB8 sister-chromatid cohesion protein 3 isoform X1

5.2e-138

92.96

Show/hide

Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKR-----------AYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARN
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIP IFLEAMKR           AYHRHTVELS NSDGPST KSFLECRELAARLSGTYVGAARN
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKR-----------AYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARN

Query:  KHRLDILKIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRG
        KHRLDILKIVKDGIEHAFSD PKNLSFLEC ILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRG
Subjt:  KHRLDILKIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRG

Query:  RPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RPRKKHN+QGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEED EEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAG PST
Subjt:  RPRKKHNLQGKRLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

A0A5A7U700 Sister-chromatid cohesion protein 3 isoform X2

1.2e-139

96.34

Show/hide

Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIP IFLEAMKRAYHRHTVELS NSDGPST KSFLECRELAARLSGTYVGAARNKHRLDILKIVK
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK

Query:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK
        DGIEHAFSD PKNLSFLEC ILHFVSKLSTPDILEIIK VQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN+QGK
Subjt:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK

Query:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RLFDEQSTSEEEESISASDHEDVHDEEKQDEED EEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAG PST
Subjt:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

A0A5D3CIX2 Sister-chromatid cohesion protein 3 isoform X2

1.2e-139

96.34

Show/hide

Query:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK
        +EYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIP IFLEAMKRAYHRHTVELS NSDGPST KSFLECRELAARLSGTYVGAARNKHRLDILKIVK
Subjt:  EEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDILKIVK

Query:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK
        DGIEHAFSD PKNLSFLEC ILHFVSKLSTPDILEIIK VQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN+QGK
Subjt:  DGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGK

Query:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST
        RLFDEQSTSEEEESISASDHEDVHDEEKQDEED EEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAG PST
Subjt:  RLFDEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

SwissProt top hits

e value

%identity

Alignment

O82265 Sister-chromatid cohesion protein 3

3.2e-68

52.85

Show/hide

Query:  NVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDIL
        +V P++YLGP IISH  +HG  V  I+K+ I  L+KK+D+I NI+LE++KRAYHR++ ELS+  +     K   E RELA  LSG Y+GAARNK+RL+IL
Subjt:  NVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDIL

Query:  KIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN
         +VK+G+E AF D PK L FLE AIL F ++LS  DI++I KDVQ R  ++NTDEDPSGWRP  TF+++L EK  K++ LQD+KE  + RRRGRPRK+  
Subjt:  KIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN

Query:  LQGKRLFDEQSTSEEEESIS-ASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREE
         + KRLFDEQS S+E+ESIS  SD ED  D         E+ PLI +IRS+++ ++L+  R +
Subjt:  LQGKRLFDEQSTSEEEESIS-ASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREE

Arabidopsis top hits

e value

%identity

Alignment

AT2G47980.1 sister-chromatid cohesion protein 3

2.3e-69

52.85

Show/hide

Query:  NVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDIL
        +V P++YLGP IISH  +HG  V  I+K+ I  L+KK+D+I NI+LE++KRAYHR++ ELS+  +     K   E RELA  LSG Y+GAARNK+RL+IL
Subjt:  NVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRLDIL

Query:  KIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN
         +VK+G+E AF D PK L FLE AIL F ++LS  DI++I KDVQ R  ++NTDEDPSGWRP  TF+++L EK  K++ LQD+KE  + RRRGRPRK+  
Subjt:  KIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHN

Query:  LQGKRLFDEQSTSEEEESIS-ASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREE
         + KRLFDEQS S+E+ESIS  SD ED  D         E+ PLI +IRS+++ ++L+  R +
Subjt:  LQGKRLFDEQSTSEEEESIS-ASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGATTATTATTGGTGGAGTGGGAGCAGAGGAGCCGTGTAATGTATATCCCGAAGAGTATCTTGGTCCAGCAATTATTTCTCATTTTCTGATACATGGGACAAGTGTAGC
AGATATTGTTAAGCATTTCATTGCCATGTTGAAAAAGAAGGATGACAATATCCCCAATATCTTTCTTGAAGCCATGAAAAGAGCCTACCATCGACATACGGTAGAACTTT
CGACAAATAGTGATGGGCCTTCAACGGGCAAATCCTTTCTAGAATGTAGGGAGTTGGCTGCTCGGCTTTCTGGAACATATGTGGGTGCAGCTAGGAACAAGCATAGATTG
GATATTTTAAAGATTGTTAAGGATGGAATTGAGCATGCCTTCTCTGATGTACCGAAGAATTTATCTTTCCTAGAATGTGCCATTCTACATTTTGTATCCAAACTGTCTAC
ACCTGATATCCTGGAAATTATCAAGGATGTCCAGAATCGAACAGGAAATATTAATACAGATGAAGACCCAAGTGGGTGGCGCCCGTATCATACATTTGTTGACAGCTTAC
GTGAAAAGTATGCTAAAAGTGATGGTTTGCAAGATGAGAAAGAAGGAAATTCTACTAGACGTAGGGGTCGGCCCCGTAAAAAACATAACTTACAGGGAAAGAGACTTTTT
GATGAGCAAAGTACAAGTGAAGAAGAAGAATCAATCAGTGCATCTGATCATGAAGATGTACATGACGAAGAGAAGCAAGACGAGGAAGATGAGGAAGAAGTTCCTCTCAT
CCATTCAATTCGGTCATCCTCTAAATTGAGGTCACTGAGAATTTCAAGAGAGGAAAAAAAAGGGACTTCTACGGGAAAAGCTGCAGGGCTTCCATCTACATGAAGAGAAC
TGATTGTCTGAATTTTGCATCGAGCGATTTATCATGATGTACAAATATCCCATATAGCAGTTGTGTATTTGTACACAAAACGAAGTCATGTTGACTTAATCTTAATTGAG
AGGTTGCTCGTGAAACTTTCTGAAGTGCTACCTAAGGAGTTGTGGCTATGTTGATAATAGTCGTTAATCTAGTTCGCCTCAAACATTTATGTGATAGGTTTAGAGTGTCA
TTAGCATGCTTTTGTGCTTAGTTTAGCTTGTTTTCTTTAATTTTCATGTTGCTTGTTTGTAAGTGGCATTTTGCACTTTGCTAGTCAGTTCAATATAAAAATGTTTAAAA
TGTACTATAGGAAAAACACACTAGTCAATTCTCTAATTAAGTCTTGTACTCTTTGCAAACCAAGCTTTCTTGTAATTGGTGGTCTTCAATGCTTTTT

Protein sequence

Show/hide protein sequence

MIIIGGVGAEEPCNVYPEEYLGPAIISHFLIHGTSVADIVKHFIAMLKKKDDNIPNIFLEAMKRAYHRHTVELSTNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRL
DILKIVKDGIEHAFSDVPKNLSFLECAILHFVSKLSTPDILEIIKDVQNRTGNINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHNLQGKRLF
DEQSTSEEEESISASDHEDVHDEEKQDEEDEEEVPLIHSIRSSSKLRSLRISREEKKGTSTGKAAGLPST

CSPI01G25720 (gene) of Cucumber (PI 183967) v1 genome