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CSPI01G25790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G25790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:21181869..21182243
RNA-Seq ExpressionCSPI01G25790
SyntenyCSPI01G25790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050974.1 hypothetical protein E6C27_scaffold761G001040 [Cucumis melo var. makuwa]1.4e-0688.24Show/hide
Query:  RIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLH
        ++PSVETK LLRRQIKGARDDSKGFLDSPA NLH
Subjt:  RIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLH
KGN46602.1 hypothetical protein Csa_005079 [Cucumis sativus]3.7e-1866.67Show/hide
Query:  FHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARDDSKGFLDS
        FHL+HLDF  +SKS ETHTN++T G TN+P     TR+ITPR   IHLPTIL R+ S+ETK LLR QIKGA DD+KGFLDS
Subjt:  FHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARDDSKGFLDS
KGN66003.1 hypothetical protein Csa_006997 [Cucumis sativus]1.3e-6096.77Show/hide
Query:  MSRGEAIASKESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARD
        MSRGEAIAS+ESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSIT RR SIHLPTILRRIPSVETKPLLRRQIKGARD
Subjt:  MSRGEAIASKESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARD

Query:  DSKGFLDSPAMNLHQARHQQTTPA
        DSKG LDSPAMNLHQARHQQTTPA
Subjt:  DSKGFLDSPAMNLHQARHQQTTPA
TrEMBL top hitse value%identityAlignment
A0A0A0KDY3 Uncharacterized protein1.8e-1866.67Show/hide
Query:  FHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARDDSKGFLDS
        FHL+HLDF  +SKS ETHTN++T G TN+P     TR+ITPR   IHLPTIL R+ S+ETK LLR QIKGA DD+KGFLDS
Subjt:  FHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARDDSKGFLDS
A0A0A0LW98 Uncharacterized protein6.4e-6196.77Show/hide
Query:  MSRGEAIASKESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARD
        MSRGEAIAS+ESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSIT RR SIHLPTILRRIPSVETKPLLRRQIKGARD
Subjt:  MSRGEAIASKESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARD

Query:  DSKGFLDSPAMNLHQARHQQTTPA
        DSKG LDSPAMNLHQARHQQTTPA
Subjt:  DSKGFLDSPAMNLHQARHQQTTPA
A0A5A7U6P5 Uncharacterized protein7.0e-0788.24Show/hide
Query:  RIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLH
        ++PSVETK LLRRQIKGARDDSKGFLDSPA NLH
Subjt:  RIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCGCGGAGAGGCAATAGCTTCCAAAGAATCAGATTCAATGTGCAGCGAGGGAATAGAGTTACCAAACTGTTCACGCTTTCACCTCGACCACCTTGATTTTCCACA
TTATTCTAAATCTTTTGAAACCCACACCAATCAAAGAACCAGGGGAGTCACCAACGATCCAAACAATTTCTCCCAAACCAGAAGCATTACACCAAGACGCAGCAGCATTC
ATCTTCCAACTATCCTCCGACGGATTCCAAGTGTCGAGACTAAACCCCTTCTTAGGCGCCAAATCAAGGGAGCTCGAGACGATAGCAAAGGATTCTTGGATAGTCCTGCA
ATGAATTTGCACCAAGCTCGACACCAACAGACAACACCGGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCGCGGAGAGGCAATAGCTTCCAAAGAATCAGATTCAATGTGCAGCGAGGGAATAGAGTTACCAAACTGTTCACGCTTTCACCTCGACCACCTTGATTTTCCACA
TTATTCTAAATCTTTTGAAACCCACACCAATCAAAGAACCAGGGGAGTCACCAACGATCCAAACAATTTCTCCCAAACCAGAAGCATTACACCAAGACGCAGCAGCATTC
ATCTTCCAACTATCCTCCGACGGATTCCAAGTGTCGAGACTAAACCCCTTCTTAGGCGCCAAATCAAGGGAGCTCGAGACGATAGCAAAGGATTCTTGGATAGTCCTGCA
ATGAATTTGCACCAAGCTCGACACCAACAGACAACACCGGCGTAA
Protein sequenceShow/hide protein sequence
MSRGEAIASKESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARDDSKGFLDSPA
MNLHQARHQQTTPA