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CSPI01G25900 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G25900
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlycine-rich protein family
Genome locationChr1:21275034..21275706
RNA-Seq ExpressionCSPI01G25900
SyntenyCSPI01G25900
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050947.1 uncharacterized protein E6C27_scaffold761G00740 [Cucumis melo var. makuwa]2.6e-6084.29Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MASPISFLP+VLAL V LRCPS        +  D EI GQMVVE FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRGRPYVVGQLRTL
         NFLFYNKATAQSVRNALR+GCS+SSQRGRPYVVGQL TL
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRGRPYVVGQLRTL

KAE8653344.1 hypothetical protein Csa_007318 [Cucumis sativus]8.9e-4598.88Show/hide
Query:  MVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG
        MVVEGFKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG
Subjt:  MVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG

XP_008450550.1 PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]4.7e-5483.72Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MASPISFLP+VLAL V LRCPS        +  D EI GQMVVE FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRG
         NFLFYNKATAQSVRNALR+GCS+SSQRG
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRG

XP_022158829.1 uncharacterized protein LOC111025289 [Momordica charantia]1.4e-4272.09Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MA P +FLPI+LALAV L  PS    V  E     EIPGQ+V E  +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD+ F
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRG
         NFLFYNKA AQ+VRNALR GCSYSSQRG
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRG

XP_031736077.1 uncharacterized protein LOC101204762 [Cucumis sativus]9.2e-5889.15Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MASPISFLPI LALAVLLRCPS +         D EIPGQMVVEGFKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRG
        QNFLFYNKATAQSVRNALRVGCSYSSQRG
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRG

TrEMBL top hitse value%identityAlignment
A0A0A0LYD5 Uncharacterized protein8.1e-6897.67Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MASPISFLPI LALAVLLRCPSGHLHV+RELKPDTEIPGQMVVEGFKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRG
        QNFLFYNKATAQSVRNALRVGCSYSSQRG
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRG

A0A1S3BPH6 uncharacterized protein LOC1034921172.3e-5483.72Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MASPISFLP+VLAL V LRCPS        +  D EI GQMVVE FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRG
         NFLFYNKATAQSVRNALR+GCS+SSQRG
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRG

A0A5A7U972 Uncharacterized protein1.2e-6084.29Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MASPISFLP+VLAL V LRCPS        +  D EI GQMVVE FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRGRPYVVGQLRTL
         NFLFYNKATAQSVRNALR+GCS+SSQRGRPYVVGQL TL
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRGRPYVVGQLRTL

A0A6J1E0J9 uncharacterized protein LOC1110252896.9e-4372.09Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MA P +FLPI+LALAV L  PS    V  E     EIPGQ+V E  +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD+ F
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRG
         NFLFYNKA AQ+VRNALR GCSYSSQRG
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRG

A0A6J1JMH7 uncharacterized protein LOC1114865291.1e-3765.12Show/hide
Query:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF
        MASP+  L ++   A+ L C S    V  E     E  GQ V +GF+CFDN  IYNGCESAYRLNPSG+ NVP +ATNLFCNGPCLIETQLLLNCLD+ F
Subjt:  MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRVGCSYSSQRG
         NFLFYNKAT  +V+NALR GCSYS+QRG
Subjt:  QNFLFYNKATAQSVRNALRVGCSYSSQRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)4.9e-2552.75Show/hide
Query:  GQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG
        G +V     CF+N  +Y GC  A+RLN  G F VPPE T+ FCNGPC  ET+L+L C+++   +F+FYN+AT + VRNALR GCS S  RG
Subjt:  GQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG

AT5G49350.1 Glycine-rich protein family1.4e-1939.36Show/hide
Query:  EIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG
        E P ++V +  +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC++    ++ F+N+AT   +R  L+ GCSY  +RG
Subjt:  EIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG

AT5G49350.2 Glycine-rich protein family1.4e-1939.36Show/hide
Query:  EIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG
        E P ++V +  +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC++    ++ F+N+AT   +R  L+ GCSY  +RG
Subjt:  EIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCAATTAGCTTCCTCCCCATTGTTCTCGCTCTTGCTGTCTTGCTCCGCTGCCCCTCAGGTCATCTCCATGTCGTTCGGGAACTCAAACCCGATACAGAGAT
TCCTGGACAAATGGTGGTTGAAGGCTTCAAATGTTTTGACAATAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTC
CCGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTCTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACC
GCACAAAGCGTTCGAAACGCCCTCCGTGTTGGCTGCAGCTACTCGAGCCAAAGAGGTAGGCCATACGTTGTTGGCCAGCTACGTACCTTATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCCAATTAGCTTCCTCCCCATTGTTCTCGCTCTTGCTGTCTTGCTCCGCTGCCCCTCAGGTCATCTCCATGTCGTTCGGGAACTCAAACCCGATACAGAGAT
TCCTGGACAAATGGTGGTTGAAGGCTTCAAATGTTTTGACAATAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTC
CCGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTCTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACC
GCACAAAGCGTTCGAAACGCCCTCCGTGTTGGCTGCAGCTACTCGAGCCAAAGAGGTAGGCCATACGTTGTTGGCCAGCTACGTACCTTATGTTAA
Protein sequenceShow/hide protein sequence
MASPISFLPIVLALAVLLRCPSGHLHVVRELKPDTEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKAT
AQSVRNALRVGCSYSSQRGRPYVVGQLRTLC