; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G26080 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G26080
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionExonuclease domain-containing protein
Genome locationChr1:21433764..21436047
RNA-Seq ExpressionCSPI01G26080
SyntenyCSPI01G26080
Gene Ontology termsGO:0000738 - DNA catabolic process, exonucleolytic (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR040393 - Three-prime repair exonuclease 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALG62680.1 exonuclease DPD1 [Cucumis sativus]2.5e-18399.69Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVP MQELIPIIL
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLDISDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

KAG6590475.1 Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.6e-14279.14Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS++TKAG KAKT+PSSKP+NIRNEIL+ESV  SCTV+INKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        K+ TQKLQ C+IQ TI+K KE A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI++RMV  P VPRM+ELIPI+L
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QF+KSRQKP GYVLLVAHNARTFDVPFLL EFSR SVDIPLNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKK
        TFDLKL I DL+ER+FT  DLINKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKK

XP_004135590.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus]1.1e-18399.69Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQES+LASCTVNINKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLDISDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

XP_008450585.1 PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis melo]1.3e-16388.99Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSITTKAG KAKTNPSSKPTNI NEILQES+ ASCTVN+NKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        KS TQKLQYCDIQPTIIKSKEF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+N MV S  VPRMQELIPIIL
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLD+SDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

XP_022968752.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima]2.5e-14380.12Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS+TTKAG KAKTNPSSKP+NIRNEIL+ESV  SCTV+INKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        K  TQKLQ C+IQ TIIK KE A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI++RMV  P VPRM+ELIPI+L
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIPLNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKL I DL+ER+FT  DLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LVY3 Exonuclease domain-containing protein5.4e-18499.69Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQES+LASCTVNINKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLDISDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

A0A0N9LRH7 Exonuclease DPD11.2e-18399.69Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVP MQELIPIIL
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLDISDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

A0A1S4DY73 exonuclease DPD1, chloroplastic/mitochondrial6.2e-16488.99Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSITTKAG KAKTNPSSKPTNI NEILQES+ ASCTVN+NKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        KS TQKLQYCDIQPTIIKSKEF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+N MV S  VPRMQELIPIIL
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLD+SDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

A0A6J1HDU6 exonuclease DPD1, chloroplastic/mitochondrial3.0e-14278.83Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FR YNLEGG++KRWTRKS++TKAG KAKT+PSSKP+NIRNEIL+ESV  SCTV+INKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        K+ TQKLQ C+IQ TI+K KE A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI++RMV  P VPRM+ELIPI+L
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QF+KSRQKP GYVLLVAHNARTFDVPFLL EFSR SVDIPLNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKK
        TFDLKL I DL+ER+FT  DLINKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKK

A0A6J1HUD7 exonuclease DPD1, chloroplastic/mitochondrial1.2e-14380.12Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS+TTKAG KAKTNPSSKP+NIRNEIL+ESV  SCTV+INKSE
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL
        K  TQKLQ C+IQ TIIK KE A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI++RMV  P VPRM+ELIPI+L
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
        QFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIPLNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKL I DL+ER+FT  DLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

SwissProt top hitse value%identityAlignment
Q682U6 Exonuclease DPD1, chloroplastic/mitochondrial4.7e-6042.41Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC+SI +  +  +    +   E  H   +N         L  R  +++G    RW R++++T       T   S+ +N ++ +L  +V  +  ++    E
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII
        +S T+   + ++Q  + + K+ + L+TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN++IHGI N MV  P VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP NWL  D++ LAR+ MK  +  +    +L+AL +YY +  +G AHRALSDV LLS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL

Q895K2 DNA polymerase III PolC-type3.4e-1030Show/hide
Query:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITNSNIH--GISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDV
        + FDIETTGFS   D+I+EI    +  G+    + T +NP+  I    I   GI + MV     P+++E++P  + F++         +LVAHNA  FDV
Subjt:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITNSNIH--GISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDV

Query:  PFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRLTFDLK----LDISDLVERAFTPLDL
         F+      +   I  N    DT+ L + L      ++ +  L  + ++ GI L    HRA+ D +    IL +   DLK    ++++ L E  F   D+
Subjt:  PFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRLTFDLK----LDISDLVERAFTPLDL

Q8EQU6 DNA polymerase III PolC-type4.2e-0832.04Show/hide
Query:  TVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITNSNIH--GISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTF
        T + FD+ETTG S   D I+E+A   + GGE    F++  NP   ++ + I   GI++ MV+           P +   +K      G  +LVAHNA +F
Subjt:  TVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITNSNIH--GISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTF

Query:  DVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVR----LLSSILQRL
        D+ FL   F R   +   N +  DT+ LAR L+     ++    L  L ++  I+L  + HRA+ D      LL  ++QRL
Subjt:  DVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVR----LLSSILQRL

Q8RA32 DNA polymerase III PolC-type4.1e-1132Show/hide
Query:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITN--SNIHGISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDV
        + FDIETTG S   D I+EI    +   +   TF+T +NPQ  I++  + + GI   MV     P ++E++P  L+F K         +LVAHNA  FDV
Subjt:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITN--SNIHGISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDV

Query:  PFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
         F+ S+  +  + +    L  DT+ L+R L +     +    L  L E++ +KL    HRA+ D +  + I  ++
Subjt:  PFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL

Q8XJR3 DNA polymerase III PolC-type6.9e-1131.53Show/hide
Query:  PTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITN--SNIHGISNRMVDSPSVPRMQELIPIILQFVKSRQKPG
        P +I   E +     + FDIETTGFS   D+I+EI    L  GE   +F T ++P+  I    + +  I+  MV+    P + E++P  ++FV       
Subjt:  PTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITN--SNIHGISNRMVDSPSVPRMQELIPIILQFVKSRQKPG

Query:  GYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRLTFDLK--LDI
        G  +LVAHNA  FDV F+        +   L     DT+ LAR L       + K+ L  + ++ GI L+   HRA+ D +  + IL+     +K  +DI
Subjt:  GYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRLTFDLK--LDI

Query:  SDL
         D+
Subjt:  SDL

Arabidopsis top hitse value%identityAlignment
AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-6142.41Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC+SI +  +  +    +   E  H   +N         L  R  +++G    RW R++++T       T   S+ +N ++ +L  +V  +  ++    E
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII
        +S T+   + ++Q  + + K+ + L+TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN++IHGI N MV  P VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP NWL  D++ LAR+ MK  +  +    +L+AL +YY +  +G AHRALSDV LLS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL

AT5G26940.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-6142.41Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC+SI +  +  +    +   E  H   +N         L  R  +++G    RW R++++T       T   S+ +N ++ +L  +V  +  ++    E
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII
        +S T+   + ++Q  + + K+ + L+TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN++IHGI N MV  P VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP NWL  D++ LAR+ MK  +  +    +L+AL +YY +  +G AHRALSDV LLS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL

AT5G26940.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-6142.41Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC+SI +  +  +    +   E  H   +N         L  R  +++G    RW R++++T       T   S+ +N ++ +L  +V  +  ++    E
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII
        +S T+   + ++Q  + + K+ + L+TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN++IHGI N MV  P VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP NWL  D++ LAR+ MK  +  +    +L+AL +YY +  +G AHRALSDV LLS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL

AT5G26940.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-6142.41Show/hide
Query:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE
        MC+SI +  +  +    +   E  H   +N         L  R  +++G    RW R++++T       T   S+ +N ++ +L  +V  +  ++    E
Subjt:  MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSE

Query:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII
        +S T+   + ++Q  + + K+ + L+TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN++IHGI N MV  P VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNIHGISNRMVDSPSVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP NWL  D++ LAR+ MK  +  +    +L+AL +YY +  +G AHRALSDV LLS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCTTTCAATCTTCCGATTTCCGAAATATGGAGTCCCTGTTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGGAATCATGGTCATAATTGTTGGTA
TGATCAGCTTTGTTTTAGGATCTATAACCTTGAAGGAGGGCGGAACAAGAGATGGACCAGAAAATCTATTACTACCAAAGCGGGGGAGAAGGCAAAGACCAACCCTAGCA
GTAAACCCACCAATATCAGGAATGAAATCTTGCAGGAATCGGTGTTAGCAAGCTGTACAGTTAACATTAACAAGTCCGAGAAAAGTGAAACTCAGAAGCTTCAATATTGT
GATATTCAACCAACAATTATTAAGAGCAAGGAATTCGCTCACCTGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGA
AATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAAATCCACAGTGCTATATTACAAATTCAAATATACATGGCATTTCAAACCGTATGG
TCGATAGTCCCAGTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAAAGCCGTCAGAAACCTGGTGGTTATGTATTATTGGTAGCTCATAATGCT
CGTACCTTCGACGTACCCTTTTTACTCAGTGAATTCAGCCGTTACTCCGTTGATATTCCTCTAAATTGGCTATTTTTCGATACTATGACGTTAGCCCGTCAACTGATGAA
GTTATCCGATTCGAAGATTACAAAAATAACATTACAAGCTCTTGGCGAGTATTACGGTATAAAACTGGATGGTAAAGCACATCGAGCATTGTCAGACGTGAGATTGTTGT
CATCGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATATCTCGGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAG
mRNA sequenceShow/hide mRNA sequence
CCTATTTATTAATTATTTCGGAAGAATAATTATAGAGAAAGCAACGAAGCTAAAGATTTCTCTTCCCACCTCCATGTCTCCCTAAAGCACCTCTCAATCTTCTTCCACGC
CATTTACTCCCTTAACTTACGTTTTTCCTTTGGTTTTTAAATGCAGTATAATCCTCCCTCAGATTTCATTTCAGGTTGAAGAAAATTGCTTTCGGTTGCTGGATTTTGTT
GGGTTTTCTGTCTAGATTTCCCCTTGTTGTGCTGTGAATTCGAATTTTAACAGCTCCAATGTGCCTTTCAATCTTCCGATTTCCGAAATATGGAGTCCCTGTTTTAGCTA
ACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGGAATCATGGTCATAATTGTTGGTATGATCAGCTTTGTTTTAGGATCTATAACCTTGAAGGAGGGCGGAACAAGAGA
TGGACCAGAAAATCTATTACTACCAAAGCGGGGGAGAAGGCAAAGACCAACCCTAGCAGTAAACCCACCAATATCAGGAATGAAATCTTGCAGGAATCGGTGTTAGCAAG
CTGTACAGTTAACATTAACAAGTCCGAGAAAAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAGCAAGGAATTCGCTCACCTGGTGACAG
TTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTA
ATAAATCCACAGTGCTATATTACAAATTCAAATATACATGGCATTTCAAACCGTATGGTCGATAGTCCCAGTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACA
ATTTGTCAAAAGCCGTCAGAAACCTGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGACGTACCCTTTTTACTCAGTGAATTCAGCCGTTACTCCGTTG
ATATTCCTCTAAATTGGCTATTTTTCGATACTATGACGTTAGCCCGTCAACTGATGAAGTTATCCGATTCGAAGATTACAAAAATAACATTACAAGCTCTTGGCGAGTAT
TACGGTATAAAACTGGATGGTAAAGCACATCGAGCATTGTCAGACGTGAGATTGTTGTCATCGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATATCTCGGATCT
CGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAGTTTGTTGGAGTTTTTGTTGTAATGTTCTTTACTAATTGTTGTAACTTTTGTTCATTCT
TATTTGAATAACTTTTGGTCATTTTATTTACCCTCATTAGATCCTTCTTGATGTCCATATTCTCAAGAAACGGGTGGATGAATTGAAATGTCAGGACATAGTTGTTTACA
AAGAAATATGAAAGGAAG
Protein sequenceShow/hide protein sequence
MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYC
DIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNA
RTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRLTFDLKLDISDLVERAFTPLDLINKKKK