; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G26090 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G26090
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGATA transcription factor 16-like
Genome locationChr1:21437383..21438466
RNA-Seq ExpressionCSPI01G26090
SyntenyCSPI01G26090
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10277.1 GATA transcription factor 16-like [Cucumis melo var. makuwa]4.8e-6377.22Show/hide
Query:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK-------------------SLCNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSVVATV
        MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK                   SLCNACGIRFRKR+I TR TNR  RDKKRE+V DNHSS VA V
Subjt:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK-------------------SLCNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSVVATV

Query:  SATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        SATTTSSSGTT TTTT++SGVDGDENSGECGS RM++MM LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLIS
Subjt:  SATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS

XP_008450587.1 PREDICTED: GATA transcription factor 16-like [Cucumis melo]1.6e-6686.34Show/hide
Query:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSS
        MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKR+I TR TNR  RDKKRE+V DNHSS VA VSATTTSSSGTT TTTT++S
Subjt:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSS

Query:  GVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        GVDGDENSGECGS RM++MM LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLIS
Subjt:  GVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS

XP_011659732.1 GATA transcription factor 16 [Cucumis sativus]1.1e-7898.74Show/hide
Query:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGV
        MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKV+DNHSS VATVSATTTSSSGTTITTTTSSSGV
Subjt:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGV

Query:  DGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        DGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
Subjt:  DGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS

XP_022931670.1 GATA transcription factor 16-like [Cucurbita moschata]3.6e-3458.33Show/hide
Query:  MGFMDLSQKGLLL------ADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTT
        MG M+++QKGLLL         KCCVDC TTKTPLWRGGP GPKSLCNACGIRFRKRRIST     R   R+K   N S+ +  VSATT+SSSGTT   T
Subjt:  MGFMDLSQKGLLL------ADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTT

Query:  TSSSG--VDGDENSGECGSLRMRLMMSLEEDVMVVKK-QQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        T+S G   DG+E+ GEC SLRMR+MM   E+V+VV+     Q Q K+GEEE QAA+ L+ALS  S+ +
Subjt:  TSSSG--VDGDENSGECGSLRMRLMMSLEEDVMVVKK-QQWQWQRKVGEEEKQAAMSLIALSNDSLIS

XP_038880207.1 GATA transcription factor 17-like [Benincasa hispida]2.4e-5474.25Show/hide
Query:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR-RDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSG
        MG MDL QKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIST GTNR  D+KRE+VH+N S++  TVSA TTSS+GTT TTT+ S  
Subjt:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR-RDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSG

Query:  VDGDENSGECGSLRMRLMMSLEEDVMV-------VKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
         DGDEN GECGSL MRLMM+LEE+VMV       VKKQ++Q +RK+GEEEKQAA+SL+ALS  S++S
Subjt:  VDGDENSGECGSLRMRLMMSLEEDVMV-------VKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS

TrEMBL top hitse value%identityAlignment
A0A0A0M1G9 GATA-type domain-containing protein5.1e-7998.74Show/hide
Query:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGV
        MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKV+DNHSS VATVSATTTSSSGTTITTTTSSSGV
Subjt:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGV

Query:  DGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        DGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
Subjt:  DGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS

A0A1S3BQ71 GATA transcription factor 16-like7.7e-6786.34Show/hide
Query:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSS
        MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKR+I TR TNR  RDKKRE+V DNHSS VA VSATTTSSSGTT TTTT++S
Subjt:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSS

Query:  GVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        GVDGDENSGECGS RM++MM LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLIS
Subjt:  GVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS

A0A5D3CE96 GATA transcription factor 16-like2.3e-6377.22Show/hide
Query:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK-------------------SLCNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSVVATV
        MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK                   SLCNACGIRFRKR+I TR TNR  RDKKRE+V DNHSS VA V
Subjt:  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK-------------------SLCNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSVVATV

Query:  SATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        SATTTSSSGTT TTTT++SGVDGDENSGECGS RM++MM LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLIS
Subjt:  SATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS

A0A6J1C1I3 GATA transcription factor 16-like isoform X43.3e-3358.33Show/hide
Query:  MGFMDL---SQKGLLLADT-KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRR-DKKREKVHDNHSSVVATVSATTTSSSGTTITTTT
        MG MD+     K  +  DT K CVDCKTTKTPLWRGGP GPKSLCNACGIRFRKRR+ST GTNR  D+KREK H +  S  A +SA TTSSS T     +
Subjt:  MGFMDL---SQKGLLLADT-KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRR-DKKREKVHDNHSSVVATVSATTTSSSGTTITTTT

Query:  SSSGVDGDENS---GECGSLRMRLMMSLEEDVMVVKK-QQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        ++ G DG+E     GECGSLRMRLMM+L E+V+V +   + +  RK+GEEE QAA+SL+ALS  S+ +
Subjt:  SSSGVDGDENS---GECGSLRMRLMMSLEEDVMVVKK-QQWQWQRKVGEEEKQAAMSLIALSNDSLIS

A0A6J1F048 GATA transcription factor 16-like1.7e-3458.33Show/hide
Query:  MGFMDLSQKGLLL------ADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTT
        MG M+++QKGLLL         KCCVDC TTKTPLWRGGP GPKSLCNACGIRFRKRRIST     R   R+K   N S+ +  VSATT+SSSGTT   T
Subjt:  MGFMDLSQKGLLL------ADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTT

Query:  TSSSG--VDGDENSGECGSLRMRLMMSLEEDVMVVKK-QQWQWQRKVGEEEKQAAMSLIALSNDSLIS
        T+S G   DG+E+ GEC SLRMR+MM   E+V+VV+     Q Q K+GEEE QAA+ L+ALS  S+ +
Subjt:  TSSSG--VDGDENSGECGSLRMRLMMSLEEDVMVVKK-QQWQWQRKVGEEEKQAAMSLIALSNDSLIS

SwissProt top hitse value%identityAlignment
Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 11.3e-1066Show/hide
Query:  DLSQKGL--LLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRR
        D SQ+ L   L   + C DC TTKTPLWR GP GPKSLCNACGIR RK R
Subjt:  DLSQKGL--LLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRR

Q8LC59 GATA transcription factor 232.8e-1381.58Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIS
        +CC +CKTTKTP+WRGGPTGPKSLCNACGIR RK+R S
Subjt:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIS

Q8LG10 GATA transcription factor 158.1e-1339.58Show/hide
Query:  DTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRM
        + K C  C T+KTPLWRGGP GPKSLCNACGIR RK+R  T  +NR + K++K H+ +                             GD       SL+ 
Subjt:  DTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRM

Query:  RLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLI
        RLM    E +M     + Q + K+GEEE QAA+ L+ALS  S +
Subjt:  RLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLI

Q9FJ10 GATA transcription factor 161.1e-1241.84Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRL
        K C DC T+KTPLWRGGP GPKSLCNACGIR RK+R   RG    +KK +K                            SSSG  G+   GE  SL+  L
Subjt:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRL

Query:  MMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL
        M     D+ + K+   + QR+   EE+QAA+ L+ALS  S+
Subjt:  MMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL

Q9LIB5 GATA transcription factor 179.8e-1135.71Show/hide
Query:  DTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKV----------HDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGD
        DTK  CVDC T +TPLWRGGP GPKSLCNACGI+ RK+R +  G    +KK+ +           H N       +                +       
Subjt:  DTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKV----------HDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGD

Query:  ENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL
         N G    L +   + + +   V KK+ W   RK+GEEE+ AA+ L+ALS  S+
Subjt:  ENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 155.7e-1439.58Show/hide
Query:  DTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRM
        + K C  C T+KTPLWRGGP GPKSLCNACGIR RK+R  T  +NR + K++K H+ +                             GD       SL+ 
Subjt:  DTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRM

Query:  RLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLI
        RLM    E +M     + Q + K+GEEE QAA+ L+ALS  S +
Subjt:  RLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLI

AT3G16870.1 GATA transcription factor 177.0e-1235.71Show/hide
Query:  DTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKV----------HDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGD
        DTK  CVDC T +TPLWRGGP GPKSLCNACGI+ RK+R +  G    +KK+ +           H N       +                +       
Subjt:  DTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKV----------HDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGD

Query:  ENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL
         N G    L +   + + +   V KK+ W   RK+GEEE+ AA+ L+ALS  S+
Subjt:  ENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL

AT4G16141.1 GATA type zinc finger transcription factor family protein2.9e-1033.33Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRL
        K CVDC T++TPLWRGGP GPKSLCNACGI+ RK+R +  G  R+D  + K   N++  + + +  T       +       G+      GE G+++ ++
Subjt:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRL

Query:  MMSLEED----------------------------VMVVKKQQWQWQRKVGEEEKQAAMSLIALS
            E                                V KK+ W   RK+GEEE+ AA+ L+ALS
Subjt:  MMSLEED----------------------------VMVVKKQQWQWQRKVGEEEKQAAMSLIALS

AT5G26930.1 GATA transcription factor 232.0e-1481.58Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIS
        +CC +CKTTKTP+WRGGPTGPKSLCNACGIR RK+R S
Subjt:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIS

AT5G49300.1 GATA transcription factor 167.5e-1441.84Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRL
        K C DC T+KTPLWRGGP GPKSLCNACGIR RK+R   RG    +KK +K                            SSSG  G+   GE  SL+  L
Subjt:  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRL

Query:  MMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL
        M     D+ + K+   + QR+   EE+QAA+ L+ALS  S+
Subjt:  MMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCATGGATTTAAGCCAAAAGGGACTTTTGCTGGCGGATACTAAATGTTGTGTTGATTGTAAGACTACTAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACC
TAAGTCACTGTGTAATGCATGTGGGATTAGATTTAGAAAGAGAAGAATATCCACCAGAGGAACGAACAGACGTGACAAGAAGAGGGAAAAAGTTCACGACAATCACTCCT
CCGTCGTTGCCACCGTGTCAGCCACCACCACTTCCTCAAGTGGGACGACCATCACCACCACCACCTCCTCCTCCGGCGTGGATGGAGATGAGAATTCAGGGGAGTGTGGG
TCATTGAGAATGAGACTAATGATGTCATTGGAGGAGGATGTGATGGTGGTGAAGAAACAGCAGTGGCAATGGCAGAGGAAGGTCGGGGAGGAGGAGAAGCAAGCAGCCAT
GTCTTTAATAGCGCTGTCGAATGACTCTCTAATTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCATGGATTTAAGCCAAAAGGGACTTTTGCTGGCGGATACTAAATGTTGTGTTGATTGTAAGACTACTAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACC
TAAGTCACTGTGTAATGCATGTGGGATTAGATTTAGAAAGAGAAGAATATCCACCAGAGGAACGAACAGACGTGACAAGAAGAGGGAAAAAGTTCACGACAATCACTCCT
CCGTCGTTGCCACCGTGTCAGCCACCACCACTTCCTCAAGTGGGACGACCATCACCACCACCACCTCCTCCTCCGGCGTGGATGGAGATGAGAATTCAGGGGAGTGTGGG
TCATTGAGAATGAGACTAATGATGTCATTGGAGGAGGATGTGATGGTGGTGAAGAAACAGCAGTGGCAATGGCAGAGGAAGGTCGGGGAGGAGGAGAAGCAAGCAGCCAT
GTCTTTAATAGCGCTGTCGAATGACTCTCTAATTTCCTGA
Protein sequenceShow/hide protein sequence
MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSVVATVSATTTSSSGTTITTTTSSSGVDGDENSGECG
SLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS