CuGenDBv2

Gene ID	CSPI01G26280
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	serine/arginine-rich splicing factor 11 isoform X1
Genome location	Chr1:21561464..21564583
RNA-Seq Expression	CSPI01G26280
Synteny	CSPI01G26280
Gene Ontology terms	GO:0016020 - membrane (cellular component) GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

7.8e-70

96.15

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TSNSSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDY+R NSSSESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

XP_011659818.1 NKAP family protein isoform X2 [Cucumis sativus]

3.2e-71

98.34

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKDKE
        MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSR  SSESEPETSSRSKRHKKNDRTKKDKE
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKDKE

Query:  RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
Subjt:  RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

3.2e-63

90.71

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRN-SSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+YSR+ SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRN-SSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]

1.5e-73

99.45

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKDKE
        MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSRNSSSESEPETSSRSKRHKKNDRTKKDKE
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKDKE

Query:  RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
Subjt:  RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

3.1e-66

91.76

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR+ RR+KDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR NSSS+SEPETS RSKRHK+NDR K+DK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ3 Uncharacterized protein

1.5e-71

98.34

Show/hide

Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKDKE
        MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSR  SSESEPETSSRSKRHKKNDRTKKDKE
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKDKE

Query:  RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
Subjt:  RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

3.8e-70

96.15

Show/hide

Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TSNSSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDY+R NSSSESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

1.5e-63

90.71

Show/hide

Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRN-SSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+YSR+ SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRN-SSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

2.4e-56

86.89

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+A+  +SDSSSSSSRRRRRR+TRR+KDRD LRIRKKSRSHSKR RRHRRSSS+SLSSSDSESDYSR +SSS+SEPE S RSKRHKKND TK  K
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERS+S HHKRRKHKAKEKQPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

A0A6J1I4D4 NKAP family protein isoform X2

9.1e-56

86.34

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+A+  +SDSSSSSSRRRRRR+TRR+KDRD LRIRKKSRSHSKR RRHRRSSS+SLSSSDSESDYSR +SSS+SEPE S RSKRHKKND TKK  
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
         RERS+S HHKRRKHKAKEKQPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

1.3e-33

61.41

Show/hide

Query:  MAATSSAATSNSSDSSSSSSRRR--RRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKD
        MAA+SS+++S+ S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+ RR R+ SSDS     S+S YS +SSSES      +S+RHKK+++ KK 
Subjt:  MAATSSAATSNSSDSSSSSSRRR--RRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKD

Query:  KERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        K++ERS+SH HKR K++ ++K + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  KERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

AT5G27860.2 unknown protein

1.3e-33

61.41

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Query:  MAATSSAATSNSSDSSSSSSRRR--RRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKD
        MAA+SS+++S+ S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+ RR R+ SSDS     S+S YS +SSSES      +S+RHKK+++ KK 
Subjt:  MAATSSAATSNSSDSSSSSSRRR--RRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKD

Query:  KERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        K++ERS+SH HKR K++ ++K + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  KERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGGCCACATCTTCGGCTGCGACATCCAATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAAAACTCGTCGTGATAAAGATCGGGACACGCT
TAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGTAGGCACCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCCGACTCCGAATCTGATTACTCCCGCAATA
GCTCTTCTGAAAGTGAGCCTGAAACATCAAGCCGCTCAAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCATAAA
AGGCGTAAACATAAAGCTAAAGAGAAGCAACCAGAGGAGAGTAGTAGCCCTGTGCAGCTGTCCAAGTTTTTAGCACGGGAGAAGGATGATGGTACACGGCGAAGTGCCGT
CTCTGGCAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAACCAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGATTAA

mRNA sequence

Show/hide mRNA sequence

TGAAAAAGAAAAATTGGTGATCATCATTCTTAATCTTAATAACCTTACACCCAGGGTTTCCTAAACCTGTAGAGAACCTTACCCGCCGGCGCCGATGATTTATATAGCCT
CGCTGTAATTTGTGATATATCTGCTGATCAATGGCGGCCACATCTTCGGCTGCGACATCCAATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAA
AACTCGTCGTGATAAAGATCGGGACACGCTTAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGTAGGCACCGCCGCTCCTCCTCCGACTCTCTCTCTTCCT
CCGACTCCGAATCTGATTACTCCCGCAATAGCTCTTCTGAAAGTGAGCCTGAAACATCAAGCCGCTCAAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAG
AGGGAGCGAAGTAGGAGTCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGAAGCAACCAGAGGAGAGTAGTAGCCCTGTGCAGCTGTCCAAGTTTTTAGCACGGGA
GAAGGATGATGGTACACGGCGAAGTGCCGTCTCTGGCAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAACCAAAAGAAATGAATTGCTGA
AATTCTTGAACTCTAGCTTTGATTAATGCCTGTGTCTGTGTTGGAAATGAAGGTAAGGGGCATTGTTAGCTGCTGCATGAAAAAAAATAGAGTTCTACCAAAAGTTGTGT
GGTGATTATGTTGTAGAGACATTTTAAGCCTTTCAACTCTCTTCCCTTGATGTTTTGATGCCCATATGGATCAAGTTCTTGTTTTAATTCCTTATGGACCGGAGAAATTG
AAATGAAAAATTATTTACTTTGTCTTATTTTATATTTTGATGAAATGGAATGGG

Protein sequence

Show/hide protein sequence

MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRNSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHK
RRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

CSPI01G26280 (gene) of Cucumber (PI 183967) v1 genome